RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 FHL3Q13643 280 aa8.21□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 C11orf21Q9P2W6 132 aa8.21□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 C9JAW5 83 aa8.2□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 TRPT1Q86TN4 253 aaKnown RBP8.2□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 MYO9AB2RTY4 2548 aa8.2□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 IGHV7-4-1A0A0J9YVY3 117 aa8.2□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 DLX4Q92988 240 aaPredicted RBP8.2□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 ATP5LO75964 103 aa8.2□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 TMEM219Q86XT9 240 aa8.2□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 POM121L12Q8N7R1 296 aa8.2□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 LINC01356Q8N9X3 169 aa8.2□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 TRAV2A0A0B4J234 112 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 SMIM20Q8N5G0 67 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 RNF152Q8N8N0 203 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 ZNF256Q9Y2P7 627 aaPredicted RBP8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 CELSR1Q9NYQ6 3014 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 MYMXA0A1B0GTQ4 84 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 Q6ZUT4 128 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 TLN2Q9Y4G6 2542 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 ZNF462Q96JM2 2506 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 F6UB75 175 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 CFAP161Q6P656 301 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 HIVEP3Q5T1R4 2406 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 ABCA2Q9BZC7 2435 aa8.19□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 PSMB8P28062 276 aa8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 SMCPP49901 116 aaPredicted RBP8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 LRRC75A-AS1Q8N1F1 130 aa8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 TEX29Q8N6K0 151 aa8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 IGLV2-18A0A075B6J9 118 aa8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 A0A087WWL8 130 aa8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 A0A0U1RRA0 63 aa8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 H3BUX3 64 aa8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 PRB1P04280 392 aa8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 LGALS1P09382 135 aaKnown RBP8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 BRD3OSQ6XYD6 125 aa8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 BBC3Q96PG8 261 aaPredicted RBP8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 ODF3Q96PU9 254 aa8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 RPL39P62891 51 aaKnown RBP8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 SRSF1Q07955 248 aaKnown RBP eCLIP8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 MORN3Q6PF18 240 aaPredicted RBP8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 PHLDA3Q9Y5J5 127 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 TCL1BO95988 128 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 Q8N8P6 123 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 C20orf173Q96LM9 149 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 TM2D2Q9BX73 214 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 C1QTNF4Q9BXJ3 329 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 JPT2Q9H910 190 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 USP9YO00507 2555 aaPredicted RBP8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 KMT2BQ9UMN6 2715 aaPredicted RBP8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 A0A087WX48 190 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 NXPH4O95158 308 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 C2orf66Q6UXQ4 117 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 ANKRD29Q8N6D5 301 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 ZFAND2AQ8N6M9 145 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 CDIP1Q9H305 208 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 ZMAT4Q9H898 229 aa8.17□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 A8MWV9 139 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 H7C1H1 209 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 DUSP14O95147 198 aaKnown RBP8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 TSPAN13O95857 204 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 UNQ9165/PRO28630Q6UXU0 137 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 Q6ZS46 218 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 FAM208BQ5VWN6 2430 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 AVPP01185 164 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 SPATA25Q9BR10 227 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 IGHV3-11P01762 117 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 RNASE4P34096 147 aaKnown RBP8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 RNASE13Q5GAN3 156 aaKnown RBP8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 TTC32Q5I0X7 151 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 ZFAND6Q6FIF0 208 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 DAZ1Q9NQZ3 744 aaKnown RBP8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 SMPXQ9UHP9 88 aa8.16□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 F8VRH5 84 aa8.15□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 LGALS9O00182 355 aa8.15□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 MYO18BQ8IUG5 2567 aa8.15□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 FLNCQ14315 2725 aa8.15□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 GNRH2O43555 120 aa8.15□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 NTN5Q8WTR8 489 aaPredicted RBP8.15□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 HIGD1BQ9P298 99 aa8.15□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 TRAV21A0A0B4J279 112 aa8.15□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 TRBV12-3P01733 135 aa8.15□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 NRACQ8N912 160 aa8.15□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 CARD19Q96LW7 228 aa8.15□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 SNCGO76070 127 aa8.14□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 BLCAPP62952 87 aa8.14□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 OR10J6PQ8NGY7 276 aa8.14□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 KLLNB2CW77 178 aa8.14□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 RPL32P62910 135 aaKnown RBP8.14□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 Q8N2B8 174 aa8.14□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 PRO0461Q9UI25 63 aa8.14□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 CENPEQ02224 2701 aa8.14□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 TRAV12-3A0A0B4J271 114 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 A6NJY4 79 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 CCDC179H3BU77 68 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 HERV-K104P63124 156 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 GAGE2BQ13066 116 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 GAGE2EQ4V326 116 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 GAGE2DQ9UEU5 116 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms