RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 Q6ZQT7 251 aa8.46□□□□□ -1.06
ATF3-211ENST00000613954 C14orf178Q8N769 122 aaPredicted RBP8.46□□□□□ -1.06
ATF3-211ENST00000613954 RPL39LQ96EH5 51 aaKnown RBP8.46□□□□□ -1.06
ATF3-211ENST00000613954 ANKRD17O75179 2603 aaKnown RBP8.46□□□□□ -1.06
ATF3-211ENST00000613954 TRBV20-1A0A075B6N2 111 aa8.45□□□□□ -1.06
ATF3-211ENST00000613954 MGPP08493 103 aa8.45□□□□□ -1.06
ATF3-211ENST00000613954 CRYBA4P53673 196 aa8.45□□□□□ -1.06
ATF3-211ENST00000613954 UBE2D3P61077 147 aa8.45□□□□□ -1.06
ATF3-211ENST00000613954 UBE2D2P62837 147 aa8.45□□□□□ -1.06
ATF3-211ENST00000613954 Q96MF0 132 aa8.45□□□□□ -1.06
ATF3-211ENST00000613954 A6NDX4 124 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 H3BUX3 64 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 TSPAN13O95857 204 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 ANXA2RQ3ZCQ2 193 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 HIST2H2BCQ6DN03 193 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 APRG1Q8IVJ8 170 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 TMEM141Q96I45 108 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 C20orf173Q96LM9 149 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 TENM4Q6N022 2769 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 IGHV4OR15-8A0A075B7B6 117 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 A0A087WW49 117 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 LOC107984156A0A0G2JMH3 177 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 NDUFA4O00483 81 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 CD7P09564 240 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 ARL3P36405 182 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 PSMB2P49721 201 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 INSL3P51460 131 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 KRTAP1-3Q8IUG1 177 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 ARL17AQ8IVW1 177 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 FAM19A4Q96LR4 140 aa8.44□□□□□ -1.06
ATF3-211ENST00000613954 NXPH4O95158 308 aa8.43□□□□□ -1.06
ATF3-211ENST00000613954 PMVKQ15126 192 aa8.43□□□□□ -1.06
ATF3-211ENST00000613954 LY6EQ16553 131 aa8.43□□□□□ -1.06
ATF3-211ENST00000613954 GPHB5Q86YW7 130 aa8.43□□□□□ -1.06
ATF3-211ENST00000613954 SYT8Q8NBV8 401 aa8.43□□□□□ -1.06
ATF3-211ENST00000613954 PPDPFLQ8WWR9 84 aa8.43□□□□□ -1.06
ATF3-211ENST00000613954 PLEKHB2Q96CS7 222 aa8.43□□□□□ -1.06
ATF3-211ENST00000613954 CELSR2Q9HCU4 2923 aa8.43□□□□□ -1.06
ATF3-211ENST00000613954 TRAV41A0A0B4J266 112 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 LINC01548A6NM66 108 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 SOCS3O14543 225 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 SMCPP49901 116 aaPredicted RBP8.42□□□□□ -1.06
ATF3-211ENST00000613954 CRIP2P52943 208 aaPredicted RBP8.42□□□□□ -1.06
ATF3-211ENST00000613954 NDUFA11Q86Y39 141 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 TIMM17AQ99595 171 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 PTPN13Q12923 2485 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 TRAV26-1A0A087WT03 109 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 A0A0J9YY99 117 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 FSHBP01225 129 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 IGF1P05019 195 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 CRYGDP07320 174 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 TEN1Q86WV5 123 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 KIR2DL4Q99706 377 aa8.42□□□□□ -1.06
ATF3-211ENST00000613954 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.42□□□□□ -1.065e-6■■□□□ 13.4
ATF3-211ENST00000613954 CENPEQ02224 2701 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 IGLV4-69A0A075B6H9 119 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 IGIPA6NJ69 53 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 VCYO14598 125 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 DUSP14O95147 198 aaKnown RBP8.41□□□□□ -1.06
ATF3-211ENST00000613954 RNASE3P12724 160 aaKnown RBP8.41□□□□□ -1.06
ATF3-211ENST00000613954 RNASE4P34096 147 aaKnown RBP8.41□□□□□ -1.06
ATF3-211ENST00000613954 ZNF418Q8TF45 676 aaPredicted RBP8.41□□□□□ -1.06
ATF3-211ENST00000613954 TP53TG1Q9Y2A0 90 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 POLQO75417 2590 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 DEFB112Q30KQ8 113 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 C19orf54Q5BKX5 351 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 ZFP2Q6ZN57 461 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 SBSPONQ8IVN8 264 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 SLC25A29Q8N8R3 303 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 CDIP1Q9H305 208 aa8.41□□□□□ -1.06
ATF3-211ENST00000613954 CR1P17927 2039 aa8.4□□□□□ -1.06
ATF3-211ENST00000613954 A8MWV9 139 aa8.4□□□□□ -1.06
ATF3-211ENST00000613954 TSHBP01222 138 aa8.4□□□□□ -1.06
ATF3-211ENST00000613954 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.06
ATF3-211ENST00000613954 NFE4Q86UQ8 179 aa8.4□□□□□ -1.06
ATF3-211ENST00000613954 C10orf126Q8N4M7 172 aa8.4□□□□□ -1.06
ATF3-211ENST00000613954 KLHL30-AS1Q8NEE0 82 aa8.4□□□□□ -1.06
ATF3-211ENST00000613954 KIF25-AS1Q9Y6Z4 181 aa8.4□□□□□ -1.06
ATF3-211ENST00000613954 NAV2Q8IVL1 2488 aa8.4□□□□□ -1.07
ATF3-211ENST00000613954 H3BUA1 57 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 GNRH2O43555 120 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 BRI3O95415 125 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 IGHV3-30P01768 117 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 IGHG2P01859 326 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 SPINK8P0C7L1 97 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 IGHV3-30-5P0DP03 117 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 USMG5Q96IX5 58 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 DOPEY2Q9Y3R5 2298 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 TMEM262E9PQX1 116 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 M0QXV9 152 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 LINC00315P59091 139 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 FAM159AQ6UWV7 190 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 FAM110AQ9BQ89 295 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 ABCA12Q86UK0 2595 aa8.39□□□□□ -1.07
ATF3-211ENST00000613954 VPS13CQ709C8 3753 aa8.38□□□□□ -1.07
ATF3-211ENST00000613954 TCL1BO95988 128 aa8.38□□□□□ -1.07
ATF3-211ENST00000613954 IGHV4-59P01825 116 aa8.38□□□□□ -1.07
ATF3-211ENST00000613954 ZNF876PQ49A33 203 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms