RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 FAM223AQ8IWN6 122 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 TMEM61Q8N0U2 210 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 MAPKAPK5-AS1Q8N8E1 139 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.87□□□□□ -1.79
VPS13D-213ENST00000613099 FN1P02751 2386 aaKnown RBP3.87□□□□□ -1.79
VPS13D-213ENST00000613099 A0A1W2PRX2 142 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 MIFP14174 115 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 C8orf49Q96NF6 230 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 CHKB-CPT1BH3BT56 60 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 DEFB103AP81534 67 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 TRIAP1O43715 76 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 DAZ4Q86SG3 579 aaKnown RBP3.87□□□□□ -1.79
VPS13D-213ENST00000613099 DAZ1Q9NQZ3 744 aaKnown RBP3.87□□□□□ -1.79
VPS13D-213ENST00000613099 DAZ3Q9NR90 486 aaKnown RBP3.87□□□□□ -1.79
VPS13D-213ENST00000613099 IGHV3-30P01768 117 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 IGHV3-30-5P0DP03 117 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 MIAQ16674 131 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 ZNRF1Q8ND25 227 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 DEFB104AQ8WTQ1 72 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 FASNP49327 2511 aaKnown RBP3.87□□□□□ -1.79
VPS13D-213ENST00000613099 SPINK14Q6IE38 97 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 SRRM4A7MD48 611 aaKnown RBP3.87□□□□□ -1.79
VPS13D-213ENST00000613099 NBR2O15453 112 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 BCE1O60756 84 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 WISP1O95388 367 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 Q8TAT8 98 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 BRI3O95415 125 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 ENHOQ6UWT2 76 aa3.87□□□□□ -1.79
VPS13D-213ENST00000613099 MUC22E2RYF6 1773 aaPredicted RBP3.86□□□□□ -1.79
VPS13D-213ENST00000613099 FOXL2NBQ6ZUU3 175 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 WFDC9Q8NEX5 89 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 IMMP1LQ96LU5 166 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 IGKV3D-20A0A0C4DH25 116 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 MRPL53Q96EL3 112 aaKnown RBP3.86□□□□□ -1.79
VPS13D-213ENST00000613099 A6NED7 52 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 LST1O00453 97 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 C14orf132Q9NPU4 83 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 CXCL6P80162 114 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 RNF114Q9Y508 228 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 SPRY4Q9C004 299 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 A0A0J9YY99 117 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.86□□□□□ -1.79
VPS13D-213ENST00000613099 CD164Q04900 197 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 IGKV2D-26A0A0A0MRZ7 120 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 IGKV3OR2-268A0A0C4DH90 116 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 CRYGDP07320 174 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 HIST2H2BCQ6DN03 193 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 HIST2H2BDQ6DRA6 164 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 NEXN-AS1Q8NBZ9 246 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 RMI2Q96E14 147 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 TRBV7-3A0A075B6L6 115 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 IGLV3-1P01715 115 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 NREPQ16612 68 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 PRO0461Q9UI25 63 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 C5orf63A6NC05 138 aa3.86□□□□□ -1.79
VPS13D-213ENST00000613099 TRIP6Q15654 476 aaKnown RBP3.86□□□□□ -1.79
VPS13D-213ENST00000613099 IGHV1-69P01742 117 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 TMEM263Q8WUH6 116 aaKnown RBP3.85□□□□□ -1.79
VPS13D-213ENST00000613099 PSPNO60542 156 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 ZMAT4Q9H898 229 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 IGKV3-7A0A075B6H7 116 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 APRG1Q8IVJ8 170 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 IGLV2-8P01709 118 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 CCL11P51671 97 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 KLK5Q9Y337 293 aaPredicted RBP3.85□□□□□ -1.79
VPS13D-213ENST00000613099 A0A087WWL8 130 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 CDK2AP2O75956 126 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 ZNF837Q96EG3 531 aaPredicted RBP3.85□□□□□ -1.79
VPS13D-213ENST00000613099 Q9H8V8 135 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 UBE2E1P51965 193 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 ODF3Q96PU9 254 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 TRBV7-6A0A0J9YX20 115 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 UBE2D1P51668 147 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 MRPL36Q9P0J6 103 aaKnown RBP3.85□□□□□ -1.79
VPS13D-213ENST00000613099 LPAL2Q16609 132 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 HHLA3Q9XRX5 114 aa3.85□□□□□ -1.79
VPS13D-213ENST00000613099 F8WEM9 126 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 RPP25Q9BUL9 199 aaKnown RBP3.84□□□□□ -1.79
VPS13D-213ENST00000613099 IGHV1OR15-9A0A0B4J2B8 117 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 IGHV1-58A0A0C4DH39 117 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 IGHV3-66A0A0C4DH42 116 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 NDPQ00604 133 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 C17orf82Q86X59 251 aaPredicted RBP3.84□□□□□ -1.79
VPS13D-213ENST00000613099 WI2-2373I1.2A0A1W2PRP0 233 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 TMEM223A0PJW6 202 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 INSP01308 110 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 PRB3Q04118 309 aaPredicted RBP3.84□□□□□ -1.79
VPS13D-213ENST00000613099 MLANAQ16655 118 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 FBXL19-AS1Q494R0 122 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 ACANP16112 2415 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 H3BRN7 92 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 IGKV3-15P01624 115 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 C9orf139Q6ZV77 190 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 TGFBR3LH3BV60 316 aa3.84□□□□□ -1.79
VPS13D-213ENST00000613099 P0C879 139 aa3.84□□□□□ -1.8
VPS13D-213ENST00000613099 PAX8Q06710 450 aa3.84□□□□□ -1.8
VPS13D-213ENST00000613099 SERTAD4-AS1Q5TG53 156 aa3.84□□□□□ -1.8
VPS13D-213ENST00000613099 IGHV3-49A0A0A0MS15 119 aa3.84□□□□□ -1.8
VPS13D-213ENST00000613099 MRGPRG-AS1Q2M3A8 158 aa3.84□□□□□ -1.8
VPS13D-213ENST00000613099 C1orf159Q96HA4 380 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms