RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 AAMDCQ9H7C9 122 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 DPM3Q9P2X0 92 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 ACANP16112 2415 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 SH2D1AO60880 128 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 ZNF80P51504 273 aaPredicted RBP8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 ERCC8Q13216 396 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 RIGQ13278 110 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 ECSCRQ19T08 205 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 C20orf173Q96LM9 149 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 GCSHP23434 173 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 PMVKQ15126 192 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 TWIST1Q15672 202 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 FANCD2OSQ96PS1 177 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 GFRA4Q9GZZ7 299 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 K7ERJ3 54 aa8.24□□□□□ -1.09
PCDHGC3-202ENST00000611950 CACNG7P62955 275 aa8.24□□□□□ -1.09
PCDHGC3-202ENST00000611950 TEN1Q86WV5 123 aa8.24□□□□□ -1.09
PCDHGC3-202ENST00000611950 APRG1Q8IVJ8 170 aa8.24□□□□□ -1.09
PCDHGC3-202ENST00000611950 STHQ8IWL8 128 aa8.24□□□□□ -1.09
PCDHGC3-202ENST00000611950 PIP4P2Q8N4L2 257 aa8.24□□□□□ -1.09
PCDHGC3-202ENST00000611950 EGR2P11161 476 aaPredicted RBP8.24□□□□□ -1.09
PCDHGC3-202ENST00000611950 FXYD2P54710 66 aa8.24□□□□□ -1.09
PCDHGC3-202ENST00000611950 LINC00526Q96FQ7 95 aa8.24□□□□□ -1.09
PCDHGC3-202ENST00000611950 ZNF747Q9BV97 191 aa8.24□□□□□ -1.09
PCDHGC3-202ENST00000611950 TMEM14CQ9P0S9 112 aa8.24□□□□□ -1.09
PCDHGC3-202ENST00000611950 SPRY2O43597 315 aa8.23□□□□□ -1.09
PCDHGC3-202ENST00000611950 GATA1P15976 413 aaPredicted RBP8.23□□□□□ -1.09
PCDHGC3-202ENST00000611950 RNF5Q99942 180 aa8.23□□□□□ -1.09
PCDHGC3-202ENST00000611950 TTTY13Q9BZ97 58 aa8.23□□□□□ -1.09
PCDHGC3-202ENST00000611950 LINC00527Q9UJ94 153 aa8.23□□□□□ -1.09
PCDHGC3-202ENST00000611950 PYGO1Q9Y3Y4 419 aa8.23□□□□□ -1.09
PCDHGC3-202ENST00000611950 PRRC2AP48634 2157 aaKnown RBP8.23□□□□□ -1.09
PCDHGC3-202ENST00000611950 A0A096LNJ9 63 aa8.23□□□□□ -1.09
PCDHGC3-202ENST00000611950 F8W735 103 aaPredicted RBP8.23□□□□□ -1.09
PCDHGC3-202ENST00000611950 UQCRQO14949 82 aa8.23□□□□□ -1.09
PCDHGC3-202ENST00000611950 OR11H6Q8NGC7 330 aa8.23□□□□□ -1.09
PCDHGC3-202ENST00000611950 IGHV3OR16-10A0A075B7F0 116 aa8.22□□□□□ -1.09
PCDHGC3-202ENST00000611950 PRAC2D3DTV9 90 aa8.22□□□□□ -1.09
PCDHGC3-202ENST00000611950 MRPS12O15235 138 aaKnown RBP8.22□□□□□ -1.09
PCDHGC3-202ENST00000611950 NPYP01303 97 aa8.22□□□□□ -1.09
PCDHGC3-202ENST00000611950 DLX4Q92988 240 aaPredicted RBP8.22□□□□□ -1.09
PCDHGC3-202ENST00000611950 CKS2P33552 79 aa8.22□□□□□ -1.09
PCDHGC3-202ENST00000611950 MRPL51Q4U2R6 128 aaKnown RBP8.22□□□□□ -1.09
PCDHGC3-202ENST00000611950 C2orf48Q96LS8 159 aa8.22□□□□□ -1.09
PCDHGC3-202ENST00000611950 RBAKDNA6NC62 111 aa8.21□□□□□ -1.09
PCDHGC3-202ENST00000611950 K7EMI3 77 aa8.21□□□□□ -1.09
PCDHGC3-202ENST00000611950 HOXB4P17483 251 aaPredicted RBP8.21□□□□□ -1.09
PCDHGC3-202ENST00000611950 LINC01545Q5VT33 79 aa8.21□□□□□ -1.09
PCDHGC3-202ENST00000611950 VMO1Q7Z5L0 202 aa8.21□□□□□ -1.09
PCDHGC3-202ENST00000611950 C9orf85Q96MD7 179 aa8.21□□□□□ -1.09
PCDHGC3-202ENST00000611950 SORL1Q92673 2214 aa8.21□□□□□ -1.09
PCDHGC3-202ENST00000611950 ODF3BA8MYP8 253 aa8.21□□□□□ -1.1
PCDHGC3-202ENST00000611950 NDUFA3O95167 84 aa8.21□□□□□ -1.1
PCDHGC3-202ENST00000611950 ABCA2Q9BZC7 2435 aa8.21□□□□□ -1.1
PCDHGC3-202ENST00000611950 IGLV11-55A0A075B6I3 123 aa8.21□□□□□ -1.1
PCDHGC3-202ENST00000611950 LINC01548A6NM66 108 aa8.21□□□□□ -1.1
PCDHGC3-202ENST00000611950 J3QQQ9 107 aa8.21□□□□□ -1.1
PCDHGC3-202ENST00000611950 ZFP36P26651 326 aaKnown RBP8.21□□□□□ -1.1
PCDHGC3-202ENST00000611950 C11orf71Q6IPW1 123 aa8.21□□□□□ -1.1
PCDHGC3-202ENST00000611950 GAGE2AQ6NT46 116 aa8.21□□□□□ -1.1
PCDHGC3-202ENST00000611950 NPBQ8NG41 125 aa8.21□□□□□ -1.1
PCDHGC3-202ENST00000611950 PRR25Q96S07 402 aa8.21□□□□□ -1.1
PCDHGC3-202ENST00000611950 G3V318 75 aa8.2□□□□□ -1.1
PCDHGC3-202ENST00000611950 KRTAP21-3Q3LHN1 58 aa8.2□□□□□ -1.1
PCDHGC3-202ENST00000611950 PCP2Q8IVA1 136 aa8.2□□□□□ -1.1
PCDHGC3-202ENST00000611950 ORMDL3Q8N138 153 aa8.2□□□□□ -1.1
PCDHGC3-202ENST00000611950 DEFB104AQ8WTQ1 72 aa8.2□□□□□ -1.1
PCDHGC3-202ENST00000611950 DKK2Q9UBU2 259 aa8.2□□□□□ -1.1
PCDHGC3-202ENST00000611950 SMAD5-AS1Q9Y6J3 95 aa8.2□□□□□ -1.1
PCDHGC3-202ENST00000611950 WI2-2373I1.2A0A1W2PRP0 233 aa8.2□□□□□ -1.1
PCDHGC3-202ENST00000611950 LINC01620Q4KN68 170 aa8.2□□□□□ -1.1
PCDHGC3-202ENST00000611950 FAM104BQ5XKR9 115 aa8.2□□□□□ -1.1
PCDHGC3-202ENST00000611950 BEX4Q9NWD9 120 aaPredicted RBP8.2□□□□□ -1.1
PCDHGC3-202ENST00000611950 CTSGP08311 255 aa8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 C15orf32Q32M92 178 aa8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 Q96MF0 132 aa8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 NHP2Q9NX24 153 aaKnown RBP8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 IGKV3-7A0A075B6H7 116 aa8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 TRAV26-2A0A0B4J265 109 aa8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 A0A1W2PPR1 153 aa8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 M0R1W7 72 aa8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 OVOL1O14753 267 aa8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 PFN2P35080 140 aa8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 DEFB1P60022 68 aa8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 CEND1Q8N111 149 aa8.19□□□□□ -1.1
PCDHGC3-202ENST00000611950 FLNAP21333 2647 aaKnown RBP8.18□□□□□ -1.1
PCDHGC3-202ENST00000611950 CLEC19AQ6UXS0 136 aa8.18□□□□□ -1.1
PCDHGC3-202ENST00000611950 ZANQ9Y493 2812 aa8.18□□□□□ -1.1
PCDHGC3-202ENST00000611950 IGHV7-81A0A0B4J1V7 117 aa8.17□□□□□ -1.1
PCDHGC3-202ENST00000611950 RRN3P1Q2M238 152 aa8.17□□□□□ -1.1
PCDHGC3-202ENST00000611950 C15orf53Q8NAA6 179 aa8.17□□□□□ -1.1
PCDHGC3-202ENST00000611950 CD7P09564 240 aa8.17□□□□□ -1.1
PCDHGC3-202ENST00000611950 TRBV6-1A0A0K0K1D8 114 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 ATP6V0E1O15342 81 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 TRGV3P03979 118 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 IFI27L1Q96BM0 104 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 FAM19A4Q96LR4 140 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 HBDP02042 147 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 ZNF493Q6ZR52 646 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 LYPD1Q8N2G4 141 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms