RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 VSIG2Q96IQ7 327 aa12.27□□□□□ -0.45
MUC1-224ENST00000611577 RPP21Q9H633 154 aaKnown RBP12.27□□□□□ -0.45
MUC1-224ENST00000611577 SCRT2Q9NQ03 307 aa12.27□□□□□ -0.45
MUC1-224ENST00000611577 CDK2AP2O75956 126 aa12.26□□□□□ -0.45
MUC1-224ENST00000611577 CCL18P55774 89 aa12.26□□□□□ -0.45
MUC1-224ENST00000611577 ERVFC1-1P60608 527 aa12.26□□□□□ -0.45
MUC1-224ENST00000611577 TNP2Q05952 138 aa12.26□□□□□ -0.45
MUC1-224ENST00000611577 CLLU1Q5K131 121 aa12.26□□□□□ -0.45
MUC1-224ENST00000611577 FAM74A4Q5TZK3 123 aa12.26□□□□□ -0.45
MUC1-224ENST00000611577 OR10AG1Q8NH19 301 aa12.26□□□□□ -0.45
MUC1-224ENST00000611577 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
MUC1-224ENST00000611577 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
MUC1-224ENST00000611577 GATCO43716 136 aaKnown RBP12.25□□□□□ -0.45
MUC1-224ENST00000611577 OR5AL1P0C617 328 aa12.25□□□□□ -0.45
MUC1-224ENST00000611577 IFITM2Q01629 132 aa12.25□□□□□ -0.45
MUC1-224ENST00000611577 TMEM241Q24JQ0 296 aa12.25□□□□□ -0.45
MUC1-224ENST00000611577 PRADC1Q9BSG0 188 aa12.25□□□□□ -0.45
MUC1-224ENST00000611577 C9JQL5 133 aa12.24□□□□□ -0.45
MUC1-224ENST00000611577 RHODO00212 210 aa12.24□□□□□ -0.45
MUC1-224ENST00000611577 SNAI2O43623 268 aa12.24□□□□□ -0.45
MUC1-224ENST00000611577 GYPEP15421 78 aa12.24□□□□□ -0.45
MUC1-224ENST00000611577 FAM3BP58499 235 aaPredicted RBP12.24□□□□□ -0.45
MUC1-224ENST00000611577 MRPL23Q16540 153 aaKnown RBP12.24□□□□□ -0.45
MUC1-224ENST00000611577 LINC01551Q86U37 167 aa12.24□□□□□ -0.45
MUC1-224ENST00000611577 JPT2Q9H910 190 aa12.24□□□□□ -0.45
MUC1-224ENST00000611577 HERC1Q15751 4861 aa12.23□□□□□ -0.45
MUC1-224ENST00000611577 A0A087WWL8 130 aa12.23□□□□□ -0.45
MUC1-224ENST00000611577 A0A1W2PPQ1 181 aa12.23□□□□□ -0.45
MUC1-224ENST00000611577 GATA1P15976 413 aaPredicted RBP12.23□□□□□ -0.45
MUC1-224ENST00000611577 SRIP30626 198 aa12.23□□□□□ -0.45
MUC1-224ENST00000611577 RHOHQ15669 191 aa12.23□□□□□ -0.45
MUC1-224ENST00000611577 ADIRFQ15847 76 aa12.23□□□□□ -0.45
MUC1-224ENST00000611577 ZFP2Q6ZN57 461 aa12.23□□□□□ -0.45
MUC1-224ENST00000611577 C15orf54Q8N8G6 183 aa12.23□□□□□ -0.45
MUC1-224ENST00000611577 SFRP2Q96HF1 295 aa12.23□□□□□ -0.45
MUC1-224ENST00000611577 NAT8Q9UHE5 227 aa12.23□□□□□ -0.45
MUC1-224ENST00000611577 A0A096LPF7 62 aa12.22□□□□□ -0.45
MUC1-224ENST00000611577 F2Z2F3 143 aa12.22□□□□□ -0.45
MUC1-224ENST00000611577 CACNG7P62955 275 aa12.22□□□□□ -0.45
MUC1-224ENST00000611577 FAM231DQ6ZW35 169 aa12.22□□□□□ -0.45
MUC1-224ENST00000611577 SSBP4Q9BWG4 385 aaPredicted RBP12.22□□□□□ -0.45
MUC1-224ENST00000611577 SAMD10Q9BYL1 202 aa12.22□□□□□ -0.45
MUC1-224ENST00000611577 NBDYA0A0U1RRE5 68 aa12.21□□□□□ -0.45
MUC1-224ENST00000611577 TRBV6-4A0A1B0GX49 114 aa12.21□□□□□ -0.45
MUC1-224ENST00000611577 A8MWL6 223 aa12.21□□□□□ -0.45
MUC1-224ENST00000611577 IGLC6P0CF74 106 aa12.21□□□□□ -0.45
MUC1-224ENST00000611577 SMIM17P0DL12 118 aa12.21□□□□□ -0.45
MUC1-224ENST00000611577 NEGR1Q7Z3B1 354 aa12.21□□□□□ -0.45
MUC1-224ENST00000611577 C6orf223Q8N319 242 aa12.21□□□□□ -0.45
MUC1-224ENST00000611577 SLC25A29Q8N8R3 303 aa12.21□□□□□ -0.45
MUC1-224ENST00000611577 AP1S3Q96PC3 154 aa12.21□□□□□ -0.45
MUC1-224ENST00000611577 K7EQD1 137 aa12.2□□□□□ -0.46
MUC1-224ENST00000611577 NXPH4O95158 308 aa12.2□□□□□ -0.46
MUC1-224ENST00000611577 LYZL1Q6UWQ5 148 aa12.2□□□□□ -0.46
MUC1-224ENST00000611577 LOC100131303A0A0U1RQF7 123 aa12.19□□□□□ -0.46
MUC1-224ENST00000611577 RPL23P62829 140 aaKnown RBP12.19□□□□□ -0.46
MUC1-224ENST00000611577 ZNF56Q15929 161 aa12.19□□□□□ -0.46
MUC1-224ENST00000611577 ZNRF2Q8NHG8 242 aa12.19□□□□□ -0.46
MUC1-224ENST00000611577 BORCS7Q96B45 105 aa12.19□□□□□ -0.46
MUC1-224ENST00000611577 F5H697 171 aa12.18□□□□□ -0.46
MUC1-224ENST00000611577 CT83Q5H943 113 aa12.18□□□□□ -0.46
MUC1-224ENST00000611577 SH2D6Q7Z4S9 175 aa12.18□□□□□ -0.46
MUC1-224ENST00000611577 C14orf178Q8N769 122 aaPredicted RBP12.18□□□□□ -0.46
MUC1-224ENST00000611577 ISOC2Q96AB3 205 aa12.18□□□□□ -0.46
MUC1-224ENST00000611577 OSTCQ9NRP0 149 aa12.18□□□□□ -0.46
MUC1-224ENST00000611577 LINC00588Q9Y4M8 146 aa12.18□□□□□ -0.46
MUC1-224ENST00000611577 CRYGDP07320 174 aa12.17□□□□□ -0.46
MUC1-224ENST00000611577 TRGC1P0CF51 173 aa12.17□□□□□ -0.46
MUC1-224ENST00000611577 ESRGQ1W209 222 aa12.17□□□□□ -0.46
MUC1-224ENST00000611577 Q8N1X5 172 aa12.17□□□□□ -0.46
MUC1-224ENST00000611577 MGPP08493 103 aa12.16□□□□□ -0.46
MUC1-224ENST00000611577 CTRLP40313 264 aa12.16□□□□□ -0.46
MUC1-224ENST00000611577 TWIST1Q15672 202 aa12.16□□□□□ -0.46
MUC1-224ENST00000611577 UFSP1Q6NVU6 142 aa12.16□□□□□ -0.46
MUC1-224ENST00000611577 Q6ZSN1 163 aa12.16□□□□□ -0.46
MUC1-224ENST00000611577 OR10G8Q8NGN5 311 aa12.16□□□□□ -0.46
MUC1-224ENST00000611577 PGLYRP4Q96LB8 373 aa12.16□□□□□ -0.46
MUC1-224ENST00000611577 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
MUC1-224ENST00000611577 NTF3P20783 257 aa12.15□□□□□ -0.46
MUC1-224ENST00000611577 GAGE1Q13065 139 aa12.15□□□□□ -0.46
MUC1-224ENST00000611577 GAGE4Q13068 117 aa12.15□□□□□ -0.46
MUC1-224ENST00000611577 GAGE5Q13069 117 aa12.15□□□□□ -0.46
MUC1-224ENST00000611577 GAGE13Q4V321 117 aa12.15□□□□□ -0.46
MUC1-224ENST00000611577 SMIM15Q7Z3B0 74 aa12.15□□□□□ -0.46
MUC1-224ENST00000611577 TSKUQ8WUA8 353 aa12.15□□□□□ -0.46
MUC1-224ENST00000611577 RAB4BP61018 213 aa12.14□□□□□ -0.47
MUC1-224ENST00000611577 WDR73Q6P4I2 378 aa12.14□□□□□ -0.47
MUC1-224ENST00000611577 UQCC3Q6UW78 93 aa12.14□□□□□ -0.47
MUC1-224ENST00000611577 LYPD5Q6UWN5 251 aa12.14□□□□□ -0.47
MUC1-224ENST00000611577 SPATA12Q7Z6I5 190 aa12.14□□□□□ -0.47
MUC1-224ENST00000611577 GTSF1Q8WW33 167 aa12.14□□□□□ -0.47
MUC1-224ENST00000611577 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
MUC1-224ENST00000611577 MRPS16Q9Y3D3 137 aaKnown RBP12.14□□□□□ -0.47
MUC1-224ENST00000611577 COMMD7Q86VX2 200 aa12.13□□□□□ -0.47
MUC1-224ENST00000611577 GFRA4Q9GZZ7 299 aa12.13□□□□□ -0.47
MUC1-224ENST00000611577 V9GYV3 84 aa12.13□□□□□ -0.47
MUC1-224ENST00000611577 HIGD1CA8MV81 97 aa12.12□□□□□ -0.47
MUC1-224ENST00000611577 ATP6V0E2Q8NHE4 81 aa12.12□□□□□ -0.47
MUC1-224ENST00000611577 DPH3P1Q9H4G8 78 aa12.12□□□□□ -0.47
MUC1-224ENST00000611577 FAM231BA6NCW3 169 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms