RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CUX1P39880 1505 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 UGGT2Q9NYU1 1516 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 LAMB1P07942 1786 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 RGPD4Q7Z3J3 1758 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 HFM1A2PYH4 1435 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 LTBP2Q14767 1821 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 SHANK3Q9BYB0 1731 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 IQGAP3Q86VI3 1631 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 LCTP09848 1927 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 COL4A6Q14031 1691 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 TRAV2A0A0B4J234 112 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 E7EUB6 86 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 CREBL2O60519 120 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 DEFA4P12838 97 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 SEC11AP67812 179 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 CCL8P80075 99 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 BVES-AS1Q5T3Y7 98 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 HEPN1Q6WQI6 88 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 ZNF826PQ6ZT77 177 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 PMCHL2Q9BQD1 86 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 ST20Q9HBF5 79 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 MRPL35Q9NZE8 188 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 LINC00474Q9P2X8 69 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 ANKARQ7Z5J8 1434 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 SETBP1Q9Y6X0 1596 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 PEAK1Q9H792 1746 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 SHANK2Q9UPX8 1470 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 MAP3K4Q9Y6R4 1608 aa1.88□□□□□ -2.11
SMCHD1-213ENST00000609587 CDK13Q14004 1512 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 EML5Q05BV3 1969 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 IGHV1-18A0A0C4DH31 117 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 A0A1W2PPM0 123 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 C11orf86A6NJI1 115 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 ATOX1O00244 68 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 DSCR4P56555 118 aaPredicted RBP1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 ZNF345Q14585 488 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 SPANXN1Q5VSR9 72 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 LYPD5Q6UWN5 251 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 DYNLRB2Q8TF09 96 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 PPDPFLQ8WWR9 84 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 CST11Q9H112 138 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 C14orf132Q9NPU4 83 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 CACFD1Q9UGQ2 172 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 NDUFA12Q9UI09 145 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 RGPD3A6NKT7 1758 aaPredicted RBP1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 GOLGA3Q08378 1498 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 SLX4Q8IY92 1834 aa1.87□□□□□ -2.11
SMCHD1-213ENST00000609587 ADAMTS7Q9UKP4 1686 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 PLXNA2O75051 1894 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 MYO18AQ92614 2054 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 BLMP54132 1417 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 KDM3BQ7LBC6 1761 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 TRAV17A0A0B4J275 112 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 HMSDA8MTL9 139 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 ZNF705FA8MVS1 300 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 ODF3BA8MYP8 253 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 CCL16O15467 120 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 CRPP02741 224 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 PIPP12273 146 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 MIFP14174 115 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 ADCYAP1P18509 176 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 HINT1P49773 126 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 ARPINQ7Z6K5 226 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 SERP2Q8N6R1 65 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 TMEM141Q96I45 108 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 TIMM9Q9Y5J7 89 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 SPCS1Q9Y6A9 102 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 ABCA9Q8IUA7 1624 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 MADDQ8WXG6 1647 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 CDK12Q9NYV4 1490 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 DIDO1Q9BTC0 2240 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 CPAMD8Q8IZJ3 1885 aa1.86□□□□□ -2.11
SMCHD1-213ENST00000609587 MUC22E2RYF6 1773 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 SCN3AQ9NY46 2000 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 IGKV1D-42A0A075B6H8 117 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 TRAV3A0A0B4J244 114 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 C5orf67F2Z3F1 127 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 M0R233 179 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 RBM3P98179 157 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 WFDC2Q14508 124 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 ADIRFQ15847 76 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 ETDBQ3ZM63 59 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 ZCCHC23Q6ZST2 131 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 OR10AG1Q8NH19 301 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 TRGV9Q99603 122 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 NDUFB11Q9NX14 153 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 ATP10BO94823 1461 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 MYO16Q9Y6X6 1858 aa1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 TNS1Q9HBL0 1735 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-213ENST00000609587 KIAA1549LQ6ZVL6 1849 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 LRP5O75197 1615 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 MYO3AQ8NEV4 1616 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 MYH4Q9Y623 1939 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 UBR1Q8IWV7 1749 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 MYO5CQ9NQX4 1742 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 IGHV3-64A0A075B6Q5 118 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 TCRBV4S1A1TA0A5B7 111 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 SYS1-DBNDD2H3BUS1 97 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms