RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 XGP55808 180 aa16.74■□□□□ 0.27
SHANK2-220ENST00000608988 Q6ZS46 218 aa16.74■□□□□ 0.27
SHANK2-220ENST00000608988 ZNRF2Q8NHG8 242 aa16.74■□□□□ 0.27
SHANK2-220ENST00000608988 LINC01600Q96MT4 127 aa16.74■□□□□ 0.27
SHANK2-220ENST00000608988 FHL3Q13643 280 aa16.73■□□□□ 0.27
SHANK2-220ENST00000608988 KALRNO60229 2985 aa16.73■□□□□ 0.27
SHANK2-220ENST00000608988 PIEZO1Q92508 2521 aa16.73■□□□□ 0.27
SHANK2-220ENST00000608988 TRBV12-3P01733 135 aa16.73■□□□□ 0.27
SHANK2-220ENST00000608988 RPL11P62913 178 aaKnown RBP16.73■□□□□ 0.27
SHANK2-220ENST00000608988 ACACAQ13085 2346 aa16.72■□□□□ 0.27
SHANK2-220ENST00000608988 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.72■□□□□ 0.27
SHANK2-220ENST00000608988 TMEM223A0PJW6 202 aa16.72■□□□□ 0.27
SHANK2-220ENST00000608988 RPL39P62891 51 aaKnown RBP16.72■□□□□ 0.27
SHANK2-220ENST00000608988 TMEM219Q86XT9 240 aa16.72■□□□□ 0.27
SHANK2-220ENST00000608988 ANKRD29Q8N6D5 301 aa16.72■□□□□ 0.27
SHANK2-220ENST00000608988 PTH2Q96A98 100 aa16.72■□□□□ 0.27
SHANK2-220ENST00000608988 RHPN1-AS1Q9BWJ2 59 aa16.72■□□□□ 0.27
SHANK2-220ENST00000608988 F6UB75 175 aa16.71■□□□□ 0.27
SHANK2-220ENST00000608988 K7EMT4 169 aa16.71■□□□□ 0.27
SHANK2-220ENST00000608988 C9orf85Q96MD7 179 aa16.71■□□□□ 0.27
SHANK2-220ENST00000608988 F5H697 171 aa16.71■□□□□ 0.27
SHANK2-220ENST00000608988 SFTA2Q6UW10 78 aa16.71■□□□□ 0.27
SHANK2-220ENST00000608988 MDFICQ9P1T7 246 aa16.71■□□□□ 0.27
SHANK2-220ENST00000608988 SPTBN4Q9H254 2564 aa16.7■□□□□ 0.26
SHANK2-220ENST00000608988 TRAV26-1A0A087WT03 109 aa16.7■□□□□ 0.26
SHANK2-220ENST00000608988 IGHV3-33P01772 117 aa16.7■□□□□ 0.26
SHANK2-220ENST00000608988 EMP1P54849 157 aa16.7■□□□□ 0.26
SHANK2-220ENST00000608988 DAZ1Q9NQZ3 744 aaKnown RBP16.7■□□□□ 0.26
SHANK2-220ENST00000608988 WNK2Q9Y3S1 2297 aa16.7■□□□□ 0.26
SHANK2-220ENST00000608988 IGHG2P01859 326 aa16.69■□□□□ 0.26
SHANK2-220ENST00000608988 DEFB1P60022 68 aa16.69■□□□□ 0.26
SHANK2-220ENST00000608988 KLRB1Q12918 225 aa16.69■□□□□ 0.26
SHANK2-220ENST00000608988 TMEM263Q8WUH6 116 aaKnown RBP16.69■□□□□ 0.26
SHANK2-220ENST00000608988 ERG28Q9UKR5 140 aa16.69■□□□□ 0.26
SHANK2-220ENST00000608988 DMXL2Q8TDJ6 3036 aa16.69■□□□□ 0.26
SHANK2-220ENST00000608988 SLC25A20O43772 301 aa16.69■□□□□ 0.26
SHANK2-220ENST00000608988 TRPT1Q86TN4 253 aaKnown RBP16.69■□□□□ 0.26
SHANK2-220ENST00000608988 MGAQ8IWI9 3026 aa16.68■□□□□ 0.26
SHANK2-220ENST00000608988 SVIPQ8NHG7 77 aa16.68■□□□□ 0.26
SHANK2-220ENST00000608988 A4D1N5 150 aa16.67■□□□□ 0.26
SHANK2-220ENST00000608988 BPESC1Q9GZL8 116 aa16.67■□□□□ 0.26
SHANK2-220ENST00000608988 LINC00527Q9UJ94 153 aa16.67■□□□□ 0.26
SHANK2-220ENST00000608988 A0A087WWL8 130 aa16.66■□□□□ 0.26
SHANK2-220ENST00000608988 IGHV3-16A0A0C4DH30 117 aa16.66■□□□□ 0.26
SHANK2-220ENST00000608988 M0QY20 66 aa16.66■□□□□ 0.26
SHANK2-220ENST00000608988 JPT2Q9H910 190 aa16.66■□□□□ 0.26
SHANK2-220ENST00000608988 ZFAND6Q6FIF0 208 aa16.65■□□□□ 0.26
SHANK2-220ENST00000608988 CEP295Q9C0D2 2601 aa16.65■□□□□ 0.26
SHANK2-220ENST00000608988 MUC4Q99102 2169 aa16.65■□□□□ 0.26
SHANK2-220ENST00000608988 A0A1W2PPR1 153 aa16.65■□□□□ 0.26
SHANK2-220ENST00000608988 ATXN8Q156A1 80 aa16.65■□□□□ 0.26
SHANK2-220ENST00000608988 M0R2P5 195 aa16.64■□□□□ 0.25
SHANK2-220ENST00000608988 RHODO00212 210 aa16.64■□□□□ 0.25
SHANK2-220ENST00000608988 C20orf203Q8NBC4 194 aa16.64■□□□□ 0.25
SHANK2-220ENST00000608988 CLUHP3Q96NS8 147 aa16.64■□□□□ 0.25
SHANK2-220ENST00000608988 UBTD1Q9HAC8 227 aa16.64■□□□□ 0.25
SHANK2-220ENST00000608988 LAMA5O15230 3695 aa16.64■□□□□ 0.25
SHANK2-220ENST00000608988 C9JAW5 83 aa16.63■□□□□ 0.25
SHANK2-220ENST00000608988 IGLV1-40P01703 118 aa16.63■□□□□ 0.25
SHANK2-220ENST00000608988 ZNF22P17026 224 aaPredicted RBP16.63■□□□□ 0.25
SHANK2-220ENST00000608988 FOXC1Q12948 553 aa16.63■□□□□ 0.25
SHANK2-220ENST00000608988 ADGRG4Q8IZF6 3080 aa16.63■□□□□ 0.25
SHANK2-220ENST00000608988 I3L3M4 83 aa16.63■□□□□ 0.25
SHANK2-220ENST00000608988 PF4V1P10720 104 aa16.63■□□□□ 0.25
SHANK2-220ENST00000608988 UCNP55089 124 aa16.63■□□□□ 0.25
SHANK2-220ENST00000608988 DCANP1Q8TF63 244 aa16.63■□□□□ 0.25
SHANK2-220ENST00000608988 CITED1Q99966 193 aa16.63■□□□□ 0.25
SHANK2-220ENST00000608988 A6NDX4 124 aa16.62■□□□□ 0.25
SHANK2-220ENST00000608988 IGHV3-11P01762 117 aa16.62■□□□□ 0.25
SHANK2-220ENST00000608988 ZNF56Q15929 161 aa16.62■□□□□ 0.25
SHANK2-220ENST00000608988 TEX29Q8N6K0 151 aa16.62■□□□□ 0.25
SHANK2-220ENST00000608988 ZNF580Q9UK33 172 aa16.62■□□□□ 0.25
SHANK2-220ENST00000608988 ZNF256Q9Y2P7 627 aaPredicted RBP16.62■□□□□ 0.25
SHANK2-220ENST00000608988 TRAV12-3A0A0B4J271 114 aa16.61■□□□□ 0.25
SHANK2-220ENST00000608988 MUSTN1Q8IVN3 82 aa16.61■□□□□ 0.25
SHANK2-220ENST00000608988 EDA2RQ9HAV5 297 aa16.61■□□□□ 0.25
SHANK2-220ENST00000608988 ABCA4P78363 2273 aa16.61■□□□□ 0.25
SHANK2-220ENST00000608988 SRD5A1P18405 259 aa16.61■□□□□ 0.25
SHANK2-220ENST00000608988 RPL13AP40429 203 aaKnown RBP16.61■□□□□ 0.25
SHANK2-220ENST00000608988 PYGO1Q9Y3Y4 419 aa16.61■□□□□ 0.25
SHANK2-220ENST00000608988 TRAV2A0A0B4J234 112 aa16.6■□□□□ 0.25
SHANK2-220ENST00000608988 TRBV30A0A0K0K1B3 111 aa16.6■□□□□ 0.25
SHANK2-220ENST00000608988 EIF4EBP3O60516 100 aaPredicted RBP16.59■□□□□ 0.25
SHANK2-220ENST00000608988 RAX2Q96IS3 184 aa16.59■□□□□ 0.25
SHANK2-220ENST00000608988 IGKV3-7A0A075B6H7 116 aa16.59■□□□□ 0.25
SHANK2-220ENST00000608988 LINC01620Q4KN68 170 aa16.59■□□□□ 0.25
SHANK2-220ENST00000608988 FAM74A4Q5TZK3 123 aa16.59■□□□□ 0.25
SHANK2-220ENST00000608988 ANAPC13Q9BS18 74 aa16.59■□□□□ 0.25
SHANK2-220ENST00000608988 BSNQ9UPA5 3926 aa16.58■□□□□ 0.25
SHANK2-220ENST00000608988 IGLV4-3A0A075B6K6 122 aa16.58■□□□□ 0.24
SHANK2-220ENST00000608988 RNF152Q8N8N0 203 aa16.58■□□□□ 0.24
SHANK2-220ENST00000608988 TACC2O95359 2948 aa16.58■□□□□ 0.24
SHANK2-220ENST00000608988 IGHV1OR15-1A0A075B7D0 117 aa16.57■□□□□ 0.24
SHANK2-220ENST00000608988 Q6Q795 121 aa16.57■□□□□ 0.24
SHANK2-220ENST00000608988 A0A0J9YXY3 114 aa16.56■□□□□ 0.24
SHANK2-220ENST00000608988 TRBV10-2A0A0K0K1G8 114 aa16.56■□□□□ 0.24
SHANK2-220ENST00000608988 TGFAP01135 160 aa16.56■□□□□ 0.24
SHANK2-220ENST00000608988 CFHR3Q02985 330 aa16.56■□□□□ 0.24
SHANK2-220ENST00000608988 RNF183Q96D59 192 aa16.56■□□□□ 0.24
SHANK2-220ENST00000608988 SPANXDQ9BXN6 97 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms