RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	SYT8	Q8NBV8	401 aa		13.67	□□□□□ -0.22
NECAB3-222	ENST00000607805		H3BVH4	76 aa		13.66	□□□□□ -0.22
NECAB3-222	ENST00000607805	COX8C	Q7Z4L0	72 aa		13.66	□□□□□ -0.22
NECAB3-222	ENST00000607805	TNFSF18	Q9UNG2	199 aa		13.66	□□□□□ -0.22
NECAB3-222	ENST00000607805	URGCP-MRPS24	S4R325	110 aa		13.66	□□□□□ -0.22
NECAB3-222	ENST00000607805		B4DEV8	164 aa		13.65	□□□□□ -0.22
NECAB3-222	ENST00000607805	KRBOX1	C9JBD0	128 aa		13.65	□□□□□ -0.22
NECAB3-222	ENST00000607805	ARMS2	P0C7Q2	107 aa		13.65	□□□□□ -0.22
NECAB3-222	ENST00000607805	UBE2W	Q96B02	151 aa		13.65	□□□□□ -0.22
NECAB3-222	ENST00000607805	SFRP2	Q96HF1	295 aa		13.65	□□□□□ -0.22
NECAB3-222	ENST00000607805	AQP10	Q96PS8	301 aa		13.65	□□□□□ -0.22
NECAB3-222	ENST00000607805		Q86TA4	180 aa		13.64	□□□□□ -0.23
NECAB3-222	ENST00000607805	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.64	□□□□□ -0.23
NECAB3-222	ENST00000607805	ZNF726P1	Q15940	193 aa		13.63	□□□□□ -0.23
NECAB3-222	ENST00000607805	ZC2HC1A	Q96GY0	325 aa		13.63	□□□□□ -0.23
NECAB3-222	ENST00000607805	UBE2D3	P61077	147 aa		13.62	□□□□□ -0.23
NECAB3-222	ENST00000607805	UBE2D2	P62837	147 aa		13.62	□□□□□ -0.23
NECAB3-222	ENST00000607805	ELOB	Q15370	118 aa		13.62	□□□□□ -0.23
NECAB3-222	ENST00000607805	FAM74A4	Q5TZK3	123 aa		13.62	□□□□□ -0.23
NECAB3-222	ENST00000607805	OR11H4	Q8NGC9	324 aa		13.62	□□□□□ -0.23
NECAB3-222	ENST00000607805		A0A087WWL8	130 aa		13.61	□□□□□ -0.23
NECAB3-222	ENST00000607805		A0A087WX48	190 aa		13.61	□□□□□ -0.23
NECAB3-222	ENST00000607805	TRBV10-1	A0A0K0K1A3	114 aa		13.61	□□□□□ -0.23
NECAB3-222	ENST00000607805	PEX7	O00628	323 aa		13.61	□□□□□ -0.23
NECAB3-222	ENST00000607805		Q0VG73	95 aa		13.61	□□□□□ -0.23
NECAB3-222	ENST00000607805	ENHO	Q6UWT2	76 aa		13.61	□□□□□ -0.23
NECAB3-222	ENST00000607805	GRIFIN	A4D1Z8	144 aa		13.6	□□□□□ -0.23
NECAB3-222	ENST00000607805	SH2D1A	O60880	128 aa		13.6	□□□□□ -0.23
NECAB3-222	ENST00000607805		M0R036	132 aa		13.59	□□□□□ -0.23
NECAB3-222	ENST00000607805	HNRNPA3	P51991	378 aa	Known RBP	13.59	□□□□□ -0.23
NECAB3-222	ENST00000607805	C14orf177	Q52M58	125 aa		13.59	□□□□□ -0.23
NECAB3-222	ENST00000607805	OR10G8	Q8NGN5	311 aa		13.59	□□□□□ -0.23
NECAB3-222	ENST00000607805	HIST1H2BA	Q96A08	127 aa		13.59	□□□□□ -0.23
NECAB3-222	ENST00000607805	PLA2G2D	Q9UNK4	145 aa		13.59	□□□□□ -0.23
NECAB3-222	ENST00000607805	TRBV7-3	A0A075B6L6	115 aa		13.58	□□□□□ -0.24
NECAB3-222	ENST00000607805	FAM74A7	A6NL05	159 aa		13.58	□□□□□ -0.24
NECAB3-222	ENST00000607805	IFNA7	P01567	189 aa		13.58	□□□□□ -0.24
NECAB3-222	ENST00000607805	ZNF674	Q2M3X9	581 aa		13.58	□□□□□ -0.24
NECAB3-222	ENST00000607805	LINC01559	Q495D7	138 aa		13.58	□□□□□ -0.24
NECAB3-222	ENST00000607805	DAZAP1	Q96EP5	407 aa	Known RBP	13.58	□□□□□ -0.24
NECAB3-222	ENST00000607805	ZFP30	Q9Y2G7	519 aa		13.58	□□□□□ -0.24
NECAB3-222	ENST00000607805	PHLDA3	Q9Y5J5	127 aa		13.58	□□□□□ -0.24
NECAB3-222	ENST00000607805	ALG5	Q9Y673	324 aa		13.58	□□□□□ -0.24
NECAB3-222	ENST00000607805	CTXND1	A0A1B0GTU2	59 aa		13.57	□□□□□ -0.24
NECAB3-222	ENST00000607805	UBE2G2	P60604	165 aa		13.57	□□□□□ -0.24
NECAB3-222	ENST00000607805	RPL36A	P83881	106 aa	Known RBP	13.57	□□□□□ -0.24
NECAB3-222	ENST00000607805		Q5BKY6	102 aa		13.57	□□□□□ -0.24
NECAB3-222	ENST00000607805	FAM162B	Q5T6X4	162 aa		13.57	□□□□□ -0.24
NECAB3-222	ENST00000607805	RPL36AL	Q969Q0	106 aa	Known RBP	13.57	□□□□□ -0.24
NECAB3-222	ENST00000607805	NKX6-2	Q9C056	277 aa	Predicted RBP	13.57	□□□□□ -0.24
NECAB3-222	ENST00000607805	TNXB	P22105	4242 aa		13.57	□□□□□ -0.24
NECAB3-222	ENST00000607805	TRBV6-8	A0A0A6YYG3	113 aa		13.56	□□□□□ -0.24
NECAB3-222	ENST00000607805	C1orf43	Q9BWL3	253 aa		13.56	□□□□□ -0.24
NECAB3-222	ENST00000607805		M0R381	172 aa		13.55	□□□□□ -0.24
NECAB3-222	ENST00000607805	TPT1	P13693	172 aa	Known RBP	13.55	□□□□□ -0.24
NECAB3-222	ENST00000607805	RPL37A	P61513	92 aa	Known RBP	13.55	□□□□□ -0.24
NECAB3-222	ENST00000607805	MPV17L2	Q567V2	206 aa		13.55	□□□□□ -0.24
NECAB3-222	ENST00000607805	RPL7L1	Q6DKI1	246 aa	Known RBP	13.55	□□□□□ -0.24
NECAB3-222	ENST00000607805	ZFP82	Q8N141	532 aa		13.55	□□□□□ -0.24
NECAB3-222	ENST00000607805	TRBV6-1	A0A0K0K1D8	114 aa		13.54	□□□□□ -0.24
NECAB3-222	ENST00000607805	PTTG1	O95997	202 aa		13.54	□□□□□ -0.24
NECAB3-222	ENST00000607805	PRR27	Q6MZM9	219 aa		13.54	□□□□□ -0.24
NECAB3-222	ENST00000607805	KCNIP4	Q6PIL6	250 aa		13.54	□□□□□ -0.24
NECAB3-222	ENST00000607805	FMC1	Q96HJ9	113 aa		13.54	□□□□□ -0.24
NECAB3-222	ENST00000607805	LRP2	P98164	4655 aa		13.53	□□□□□ -0.24
NECAB3-222	ENST00000607805	USP17L23	D6RBM5	183 aa		13.53	□□□□□ -0.24
NECAB3-222	ENST00000607805	PRSS1	P07477	247 aa		13.53	□□□□□ -0.24
NECAB3-222	ENST00000607805	C15orf54	Q8N8G6	183 aa		13.53	□□□□□ -0.24
NECAB3-222	ENST00000607805	NEXN-AS1	Q8NBZ9	246 aa		13.53	□□□□□ -0.24
NECAB3-222	ENST00000607805	TMSB15B	A0A087X1C1	80 aa		13.52	□□□□□ -0.25
NECAB3-222	ENST00000607805	TMEM262	E9PQX1	116 aa		13.52	□□□□□ -0.25
NECAB3-222	ENST00000607805	LTA	P01374	205 aa		13.52	□□□□□ -0.25
NECAB3-222	ENST00000607805	RAB4B	P61018	213 aa		13.52	□□□□□ -0.25
NECAB3-222	ENST00000607805	KRTAP26-1	Q6PEX3	210 aa		13.52	□□□□□ -0.25
NECAB3-222	ENST00000607805	C9orf163	Q8N9P6	203 aa		13.52	□□□□□ -0.25
NECAB3-222	ENST00000607805	MT1HL1	P0DM35	61 aa		13.51	□□□□□ -0.25
NECAB3-222	ENST00000607805	DGAT2L7P	Q6IED9	249 aa		13.51	□□□□□ -0.25
NECAB3-222	ENST00000607805	PANO1	I0J062	215 aa		13.5	□□□□□ -0.25
NECAB3-222	ENST00000607805	CRP	P02741	224 aa		13.5	□□□□□ -0.25
NECAB3-222	ENST00000607805	MIA	Q16674	131 aa		13.5	□□□□□ -0.25
NECAB3-222	ENST00000607805	MED28	Q9H204	178 aa		13.5	□□□□□ -0.25
NECAB3-222	ENST00000607805	PRR34	Q9NV39	138 aa		13.5	□□□□□ -0.25
NECAB3-222	ENST00000607805	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.5	□□□□□ -0.25
NECAB3-222	ENST00000607805	ANG	P03950	147 aa	Known RBP	13.49	□□□□□ -0.25
NECAB3-222	ENST00000607805	FHIT	P49789	147 aa		13.49	□□□□□ -0.25
NECAB3-222	ENST00000607805	UBE2G1	P62253	170 aa		13.49	□□□□□ -0.25
NECAB3-222	ENST00000607805	NTM-AS1	Q6ZSK4	140 aa		13.49	□□□□□ -0.25
NECAB3-222	ENST00000607805	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.48	□□□□□ -0.25
NECAB3-222	ENST00000607805	OR10AG1	Q8NH19	301 aa		13.48	□□□□□ -0.25
NECAB3-222	ENST00000607805	TCEAL7	Q9BRU2	100 aa		13.48	□□□□□ -0.25
NECAB3-222	ENST00000607805	VAX2	Q9UIW0	290 aa		13.48	□□□□□ -0.25
NECAB3-222	ENST00000607805	HLA-DQA1	P01909	254 aa		13.47	□□□□□ -0.25
NECAB3-222	ENST00000607805	CXCL1	P09341	107 aa		13.47	□□□□□ -0.25
NECAB3-222	ENST00000607805	SDIM1	Q6ZPB5	146 aa		13.47	□□□□□ -0.25
NECAB3-222	ENST00000607805	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.47	□□□□□ -0.25
NECAB3-222	ENST00000607805	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.47	□□□□□ -0.25
NECAB3-222	ENST00000607805	MAP1LC3B2	A6NCE7	125 aa		13.46	□□□□□ -0.25
NECAB3-222	ENST00000607805	GIP	P09681	153 aa	Predicted RBP	13.46	□□□□□ -0.25
NECAB3-222	ENST00000607805	PKIA	P61925	76 aa		13.46	□□□□□ -0.25
NECAB3-222	ENST00000607805	MAP1LC3B	Q9GZQ8	125 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms