RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 IFNA1P01562 189 aa13□□□□□ -0.33
CTSA-217ENST00000607482 SFRP2Q96HF1 295 aa13□□□□□ -0.33
CTSA-217ENST00000607482 URGCP-MRPS24S4R325 110 aa13□□□□□ -0.33
CTSA-217ENST00000607482 A0A087WWC5 75 aa12.99□□□□□ -0.33
CTSA-217ENST00000607482 RPL35P42766 123 aaKnown RBP12.99□□□□□ -0.33
CTSA-217ENST00000607482 TCTE3Q8IZS6 198 aa12.99□□□□□ -0.33
CTSA-217ENST00000607482 C14orf178Q8N769 122 aaPredicted RBP12.99□□□□□ -0.33
CTSA-217ENST00000607482 DAZAP1Q96EP5 407 aaKnown RBP12.99□□□□□ -0.33
CTSA-217ENST00000607482 A0A087WTM6 91 aa12.98□□□□□ -0.33
CTSA-217ENST00000607482 SSTP61278 116 aa12.98□□□□□ -0.33
CTSA-217ENST00000607482 SPANXN1Q5VSR9 72 aa12.98□□□□□ -0.33
CTSA-217ENST00000607482 MAPKAPK5-AS1Q8N8E1 139 aa12.98□□□□□ -0.33
CTSA-217ENST00000607482 SCRT2Q9NQ03 307 aa12.98□□□□□ -0.33
CTSA-217ENST00000607482 CCL20P78556 96 aa12.97□□□□□ -0.33
CTSA-217ENST00000607482 RPL19P84098 196 aaKnown RBP12.97□□□□□ -0.33
CTSA-217ENST00000607482 CDPF1Q6NVV7 123 aa12.97□□□□□ -0.33
CTSA-217ENST00000607482 KCNIP4Q6PIL6 250 aa12.97□□□□□ -0.33
CTSA-217ENST00000607482 TRAV1-1A0A0B4J248 108 aa12.96□□□□□ -0.33
CTSA-217ENST00000607482 IBA57-AS1B1ANH7 110 aa12.96□□□□□ -0.33
CTSA-217ENST00000607482 SMIM17P0DL12 118 aa12.96□□□□□ -0.33
CTSA-217ENST00000607482 RPL36AP83881 106 aaKnown RBP12.96□□□□□ -0.33
CTSA-217ENST00000607482 SLC51BQ86UW2 128 aa12.96□□□□□ -0.33
CTSA-217ENST00000607482 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.96□□□□□ -0.33
CTSA-217ENST00000607482 RPL36ALQ969Q0 106 aaKnown RBP12.96□□□□□ -0.33
CTSA-217ENST00000607482 F5H697 171 aa12.95□□□□□ -0.34
CTSA-217ENST00000607482 SULT1A2P50226 295 aa12.95□□□□□ -0.34
CTSA-217ENST00000607482 ZNF56Q15929 161 aa12.95□□□□□ -0.34
CTSA-217ENST00000607482 UFSP1Q6NVU6 142 aa12.95□□□□□ -0.34
CTSA-217ENST00000607482 AKAP14Q86UN6 197 aa12.95□□□□□ -0.34
CTSA-217ENST00000607482 PDE6DO43924 150 aa12.94□□□□□ -0.34
CTSA-217ENST00000607482 C1QBP02746 253 aa12.94□□□□□ -0.34
CTSA-217ENST00000607482 FUSP35637 526 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTSA-217ENST00000607482 GNG4P50150 75 aa12.94□□□□□ -0.34
CTSA-217ENST00000607482 CENPWQ5EE01 88 aa12.94□□□□□ -0.34
CTSA-217ENST00000607482 TOR2AQ5JU69 321 aa12.94□□□□□ -0.34
CTSA-217ENST00000607482 MLST8Q9BVC4 326 aa12.94□□□□□ -0.34
CTSA-217ENST00000607482 TPPP3Q9BW30 176 aa12.94□□□□□ -0.34
CTSA-217ENST00000607482 TM2D2Q9BX73 214 aa12.94□□□□□ -0.34
CTSA-217ENST00000607482 MED9Q9NWA0 146 aa12.94□□□□□ -0.34
CTSA-217ENST00000607482 hCG_2014768A0A024R1R8 64 aa12.93□□□□□ -0.34
CTSA-217ENST00000607482 MUC21A0A0G2JKD1 596 aa12.93□□□□□ -0.34
CTSA-217ENST00000607482 TRBV10-1A0A0K0K1A3 114 aa12.93□□□□□ -0.34
CTSA-217ENST00000607482 MUC21A0A140T8X8 626 aa12.93□□□□□ -0.34
CTSA-217ENST00000607482 CXCL1P09341 107 aa12.93□□□□□ -0.34
CTSA-217ENST00000607482 MEF2BQ02080 365 aaPredicted RBP12.93□□□□□ -0.34
CTSA-217ENST00000607482 OR10AG1Q8NH19 301 aa12.93□□□□□ -0.34
CTSA-217ENST00000607482 DERL1Q9BUN8 251 aa12.93□□□□□ -0.34
CTSA-217ENST00000607482 RAB4BP61018 213 aa12.92□□□□□ -0.34
CTSA-217ENST00000607482 C11orf52Q96A22 123 aa12.92□□□□□ -0.34
CTSA-217ENST00000607482 KRTAP17-1Q9BYP8 105 aa12.92□□□□□ -0.34
CTSA-217ENST00000607482 Q9UF83 564 aa12.92□□□□□ -0.34
CTSA-217ENST00000607482 A0A087WX48 190 aa12.91□□□□□ -0.34
CTSA-217ENST00000607482 TRAV8-3A0A0A6YYJ7 113 aa12.91□□□□□ -0.34
CTSA-217ENST00000607482 LAGE3Q14657 143 aa12.91□□□□□ -0.34
CTSA-217ENST00000607482 BIN3Q9NQY0 253 aa12.91□□□□□ -0.34
CTSA-217ENST00000607482 TRBV7-3A0A075B6L6 115 aa12.9□□□□□ -0.34
CTSA-217ENST00000607482 XKRY2A2RUG3 117 aa12.9□□□□□ -0.34
CTSA-217ENST00000607482 OR5AL1P0C617 328 aa12.9□□□□□ -0.34
CTSA-217ENST00000607482 LINC00694P0DN24 101 aa12.9□□□□□ -0.34
CTSA-217ENST00000607482 RPS20P60866 119 aaKnown RBP12.9□□□□□ -0.34
CTSA-217ENST00000607482 Q6ZNX1 250 aa12.9□□□□□ -0.34
CTSA-217ENST00000607482 OR2D3Q8NGH3 330 aa12.9□□□□□ -0.34
CTSA-217ENST00000607482 VAX2Q9UIW0 290 aa12.9□□□□□ -0.34
CTSA-217ENST00000607482 IGLV5-52A0A0A0MRZ9 124 aa12.89□□□□□ -0.35
CTSA-217ENST00000607482 RAB19A4D1S5 217 aa12.89□□□□□ -0.35
CTSA-217ENST00000607482 TMEM262E9PQX1 116 aa12.89□□□□□ -0.35
CTSA-217ENST00000607482 P01737 135 aa12.89□□□□□ -0.35
CTSA-217ENST00000607482 BCL2P10415 239 aa12.89□□□□□ -0.35
CTSA-217ENST00000607482 TAGLN2P37802 199 aaKnown RBP12.89□□□□□ -0.35
CTSA-217ENST00000607482 RMI2Q96E14 147 aa12.89□□□□□ -0.35
CTSA-217ENST00000607482 AP1S3Q96PC3 154 aa12.89□□□□□ -0.35
CTSA-217ENST00000607482 SNAI2O43623 268 aa12.88□□□□□ -0.35
CTSA-217ENST00000607482 GCSHP23434 173 aa12.88□□□□□ -0.35
CTSA-217ENST00000607482 DAZ4Q86SG3 579 aaKnown RBP12.88□□□□□ -0.35
CTSA-217ENST00000607482 SMIM12Q96EX1 92 aa12.88□□□□□ -0.35
CTSA-217ENST00000607482 DAZ3Q9NR90 486 aaKnown RBP12.88□□□□□ -0.35
CTSA-217ENST00000607482 ELOBQ15370 118 aa12.87□□□□□ -0.35
CTSA-217ENST00000607482 Q8N3U1 123 aa12.87□□□□□ -0.35
CTSA-217ENST00000607482 FER1L6-AS1Q8NA97 138 aa12.87□□□□□ -0.35
CTSA-217ENST00000607482 SSBP4Q9BWG4 385 aaPredicted RBP12.87□□□□□ -0.35
CTSA-217ENST00000607482 PCLOQ9Y6V0 5065 aa12.87□□□□□ -0.35
CTSA-217ENST00000607482 GZMBP10144 247 aa12.86□□□□□ -0.35
CTSA-217ENST00000607482 COX11Q9Y6N1 276 aa12.86□□□□□ -0.35
CTSA-217ENST00000607482 LRP1BQ9NZR2 4599 aa12.86□□□□□ -0.35
CTSA-217ENST00000607482 RYR1P21817 5038 aa12.85□□□□□ -0.35
CTSA-217ENST00000607482 MGPP08493 103 aa12.85□□□□□ -0.35
CTSA-217ENST00000607482 UBE2D3P61077 147 aa12.85□□□□□ -0.35
CTSA-217ENST00000607482 UBE2D2P62837 147 aa12.85□□□□□ -0.35
CTSA-217ENST00000607482 CACNG7P62955 275 aa12.85□□□□□ -0.35
CTSA-217ENST00000607482 NTN5Q8WTR8 489 aaPredicted RBP12.85□□□□□ -0.35
CTSA-217ENST00000607482 NIT1Q86X76 327 aa12.84□□□□□ -0.35
CTSA-217ENST00000607482 Q8N1X5 172 aa12.84□□□□□ -0.35
CTSA-217ENST00000607482 Q8N814 137 aa12.84□□□□□ -0.35
CTSA-217ENST00000607482 KLK12Q9UKR0 248 aa12.84□□□□□ -0.35
CTSA-217ENST00000607482 RBFOX3A6NFN3 312 aa12.83□□□□□ -0.36
CTSA-217ENST00000607482 F2Z2F3 143 aa12.83□□□□□ -0.36
CTSA-217ENST00000607482 H7C1H1 209 aa12.83□□□□□ -0.36
CTSA-217ENST00000607482 BLOC1S1P78537 153 aa12.83□□□□□ -0.36
CTSA-217ENST00000607482 C9orf62Q8N4C0 152 aa12.83□□□□□ -0.36
CTSA-217ENST00000607482 OR10G8Q8NGN5 311 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms