RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 CT83Q5H943 113 aa9.94□□□□□ -0.82
CTSA-211ENST00000606066 C15orf54Q8N8G6 183 aa9.94□□□□□ -0.82
CTSA-211ENST00000606066 PRADC1Q9BSG0 188 aa9.94□□□□□ -0.82
CTSA-211ENST00000606066 OSTCQ9NRP0 149 aa9.94□□□□□ -0.82
CTSA-211ENST00000606066 VPS13DQ5THJ4 4388 aa9.94□□□□□ -0.82
CTSA-211ENST00000606066 RPL23P62829 140 aaKnown RBP9.93□□□□□ -0.82
CTSA-211ENST00000606066 RHOHQ15669 191 aa9.93□□□□□ -0.82
CTSA-211ENST00000606066 ADIRFQ15847 76 aa9.93□□□□□ -0.82
CTSA-211ENST00000606066 UQCC3Q6UW78 93 aa9.93□□□□□ -0.82
CTSA-211ENST00000606066 JPT2Q9H910 190 aa9.93□□□□□ -0.82
CTSA-211ENST00000606066 HECTD4Q9Y4D8 3996 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 KIAA1109Q2LD37 5005 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 A0A096LPF7 62 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 MUC21A0A0G2JKD1 596 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 MUC21A0A140T8X8 626 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 SMIM17P0DL12 118 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 GYPEP15421 78 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 FAM3BP58499 235 aaPredicted RBP9.92□□□□□ -0.82
CTSA-211ENST00000606066 SSTP61278 116 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 FAM74A4Q5TZK3 123 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 WDR73Q6P4I2 378 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 LYZL1Q6UWQ5 148 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 SLC25A29Q8N8R3 303 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 ISOC2Q96AB3 205 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 SAMD10Q9BYL1 202 aa9.92□□□□□ -0.82
CTSA-211ENST00000606066 A0A087WWL8 130 aa9.91□□□□□ -0.82
CTSA-211ENST00000606066 K7EQD1 137 aa9.91□□□□□ -0.82
CTSA-211ENST00000606066 CRYGDP07320 174 aa9.91□□□□□ -0.82
CTSA-211ENST00000606066 SRIP30626 198 aa9.91□□□□□ -0.82
CTSA-211ENST00000606066 UFSP1Q6NVU6 142 aa9.91□□□□□ -0.82
CTSA-211ENST00000606066 SH2D6Q7Z4S9 175 aa9.91□□□□□ -0.82
CTSA-211ENST00000606066 AP1S3Q96PC3 154 aa9.91□□□□□ -0.82
CTSA-211ENST00000606066 FAM231BA6NCW3 169 aa9.9□□□□□ -0.82
CTSA-211ENST00000606066 CTRLP40313 264 aa9.9□□□□□ -0.82
CTSA-211ENST00000606066 NEGR1Q7Z3B1 354 aa9.9□□□□□ -0.82
CTSA-211ENST00000606066 OR10G8Q8NGN5 311 aa9.9□□□□□ -0.82
CTSA-211ENST00000606066 TSKUQ8WUA8 353 aa9.9□□□□□ -0.82
CTSA-211ENST00000606066 GFRA4Q9GZZ7 299 aa9.9□□□□□ -0.82
CTSA-211ENST00000606066 MUC4Q99102 2169 aa9.9□□□□□ -0.83
CTSA-211ENST00000606066 TRGC1P0CF51 173 aa9.89□□□□□ -0.83
CTSA-211ENST00000606066 FOXA3P55318 350 aaPredicted RBP9.89□□□□□ -0.83
CTSA-211ENST00000606066 PNRC1Q12796 327 aaPredicted RBP9.89□□□□□ -0.83
CTSA-211ENST00000606066 C14orf178Q8N769 122 aaPredicted RBP9.89□□□□□ -0.83
CTSA-211ENST00000606066 GTSF1Q8WW33 167 aa9.89□□□□□ -0.83
CTSA-211ENST00000606066 BORCS7Q96B45 105 aa9.89□□□□□ -0.83
CTSA-211ENST00000606066 CNFNQ9BYD5 112 aa9.89□□□□□ -0.83
CTSA-211ENST00000606066 NTF3P20783 257 aa9.88□□□□□ -0.83
CTSA-211ENST00000606066 RAB4BP61018 213 aa9.88□□□□□ -0.83
CTSA-211ENST00000606066 TWIST1Q15672 202 aa9.88□□□□□ -0.83
CTSA-211ENST00000606066 ESRGQ1W209 222 aa9.88□□□□□ -0.83
CTSA-211ENST00000606066 LINC00588Q9Y4M8 146 aa9.88□□□□□ -0.83
CTSA-211ENST00000606066 V9GYV3 84 aa9.88□□□□□ -0.83
CTSA-211ENST00000606066 TRBV10-1A0A0K0K1A3 114 aa9.87□□□□□ -0.83
CTSA-211ENST00000606066 LOC100131303A0A0U1RQF7 123 aa9.87□□□□□ -0.83
CTSA-211ENST00000606066 ZNF56Q15929 161 aa9.87□□□□□ -0.83
CTSA-211ENST00000606066 Q6ZSN1 163 aa9.87□□□□□ -0.83
CTSA-211ENST00000606066 SMIM15Q7Z3B0 74 aa9.87□□□□□ -0.83
CTSA-211ENST00000606066 COMMD7Q86VX2 200 aa9.87□□□□□ -0.83
CTSA-211ENST00000606066 PGLYRP4Q96LB8 373 aa9.87□□□□□ -0.83
CTSA-211ENST00000606066 MSRB1Q9NZV6 116 aa9.87□□□□□ -0.83
CTSA-211ENST00000606066 TMEM218A2RU14 115 aa9.86□□□□□ -0.83
CTSA-211ENST00000606066 LINC00862A6NCI5 91 aa9.86□□□□□ -0.83
CTSA-211ENST00000606066 HIGD1CA8MV81 97 aa9.86□□□□□ -0.83
CTSA-211ENST00000606066 F5H697 171 aa9.86□□□□□ -0.83
CTSA-211ENST00000606066 LYPD5Q6UWN5 251 aa9.86□□□□□ -0.83
CTSA-211ENST00000606066 MRPS16Q9Y3D3 137 aaKnown RBP9.86□□□□□ -0.83
CTSA-211ENST00000606066 KIF25-AS1Q9Y6Z4 181 aa9.86□□□□□ -0.83
CTSA-211ENST00000606066 PPP1R2P9O14990 202 aa9.85□□□□□ -0.83
CTSA-211ENST00000606066 UPK3BQ9BT76 320 aa9.85□□□□□ -0.83
CTSA-211ENST00000606066 DPH3P1Q9H4G8 78 aa9.85□□□□□ -0.83
CTSA-211ENST00000606066 NAT8BQ9UHF3 227 aa9.85□□□□□ -0.83
CTSA-211ENST00000606066 A0A1B0GUT8 65 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 GAGE12JA6NER3 117 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 F8W036 122 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 MGPP08493 103 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 EVI2AP22794 236 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 TIRAPP58753 221 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 RPL36AP83881 106 aaKnown RBP9.84□□□□□ -0.83
CTSA-211ENST00000606066 GAGE1Q13065 139 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 GAGE4Q13068 117 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 GAGE5Q13069 117 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 GAGE13Q4V321 117 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 ZNRF2Q8NHG8 242 aa9.84□□□□□ -0.83
CTSA-211ENST00000606066 RPL36ALQ969Q0 106 aaKnown RBP9.84□□□□□ -0.83
CTSA-211ENST00000606066 H7C1H1 209 aa9.83□□□□□ -0.84
CTSA-211ENST00000606066 MT-ND4LP03901 98 aa9.83□□□□□ -0.84
CTSA-211ENST00000606066 LINC00315P59091 139 aa9.83□□□□□ -0.84
CTSA-211ENST00000606066 ANAPC16Q96DE5 110 aa9.83□□□□□ -0.84
CTSA-211ENST00000606066 Q9H8V8 135 aa9.83□□□□□ -0.84
CTSA-211ENST00000606066 DNAH6Q9C0G6 4158 aa9.82□□□□□ -0.84
CTSA-211ENST00000606066 TRBV7-3A0A075B6L6 115 aa9.82□□□□□ -0.84
CTSA-211ENST00000606066 SMIM27A0A1W2PRY6 76 aa9.82□□□□□ -0.84
CTSA-211ENST00000606066 RIGQ13278 110 aa9.82□□□□□ -0.84
CTSA-211ENST00000606066 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.82□□□□□ -0.84
CTSA-211ENST00000606066 NUP35Q8NFH5 326 aa9.82□□□□□ -0.84
CTSA-211ENST00000606066 SEC11CQ9BY50 192 aa9.82□□□□□ -0.84
CTSA-211ENST00000606066 GTSF1LQ9H1H1 148 aa9.82□□□□□ -0.84
CTSA-211ENST00000606066 IGLV2-18A0A075B6J9 118 aa9.81□□□□□ -0.84
CTSA-211ENST00000606066 FAT2Q9NYQ8 4349 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms