RNA–Protein interactions for RNA: ENST00000605216.5

ZSWIM8-223, Transcript of zinc finger SWIM-type containing 8, human

APPRIS P2 TSL 1 (best) BASIC

Gene ZSWIM8, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-223	ENST00000605216	CDPF1	Q6NVV7	123 aa		13.15	□□□□□ -0.3
ZSWIM8-223	ENST00000605216	FAM19A1	Q7Z5A9	133 aa		13.15	□□□□□ -0.3
ZSWIM8-223	ENST00000605216		V9GYY9	64 aa		13.15	□□□□□ -0.3
ZSWIM8-223	ENST00000605216	PDCD11	Q14690	1871 aa	Known RBP	13.15	□□□□□ -0.3
ZSWIM8-223	ENST00000605216	IGHV4-30-2	A0A087WSY4	118 aa		13.15	□□□□□ -0.3
ZSWIM8-223	ENST00000605216	COA6	Q5JTJ3	125 aa	Known RBP	13.15	□□□□□ -0.3
ZSWIM8-223	ENST00000605216	FER1L5	A0AVI2	2057 aa		13.15	□□□□□ -0.3
ZSWIM8-223	ENST00000605216	COL11A2	P13942	1736 aa	Predicted RBP	13.15	□□□□□ -0.3
ZSWIM8-223	ENST00000605216	C4orf3	Q8WVX3	66 aa		13.15	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	MLST8	Q9BVC4	326 aa		13.14	□□□□□ -0.31
ZSWIM8-223	ENST00000605216		A0A096LNI7	61 aa		13.14	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	MIA	Q16674	131 aa		13.14	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	TMEM263	Q8WUH6	116 aa	Known RBP	13.14	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	PI4KA	P42356	2102 aa		13.14	□□□□□ -0.31
ZSWIM8-223	ENST00000605216		G3V4G9	280 aa		13.14	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	C5orf56	Q8N8D9	126 aa		13.14	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	WFDC11	Q8NEX6	87 aa		13.13	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	LYPD6B	Q8NI32	183 aa		13.13	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	BRCA1	P38398	1863 aa	Known RBP	13.13	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	PRAC2	D3DTV9	90 aa		13.13	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	HIST2H2BD	Q6DRA6	164 aa		13.13	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	TRAV26-1	A0A087WT03	109 aa		13.12	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	IGKV1-17	P01599	117 aa		13.12	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	THSD7A	Q9UPZ6	1657 aa		13.12	□□□□□ -0.31
ZSWIM8-223	ENST00000605216		A0A0U1RQV1	116 aa		13.12	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	NDUFA11	Q86Y39	141 aa		13.12	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	NRXN2	Q9P2S2	1712 aa		13.12	□□□□□ -0.31
ZSWIM8-223	ENST00000605216		A0A087WZ39	114 aa		13.12	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	NUPR1	O60356	82 aa		13.12	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	PATE2	Q6UY27	113 aa		13.12	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	C20orf203	Q8NBC4	194 aa		13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	WFDC10B	Q8IUB3	73 aa		13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216		Q8NFD4	153 aa		13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	SERP1	Q9Y6X1	66 aa		13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	ARID2	Q68CP9	1835 aa		13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	KIAA2026	Q5HYC2	2103 aa		13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	TRBV10-1	A0A0K0K1A3	114 aa		13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	TMEM89	A2RUT3	159 aa		13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	ATP5EP2	Q5VTU8	51 aa		13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	RNASE8	Q8TDE3	154 aa	Known RBP	13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	RITA1	Q96K30	269 aa		13.11	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	UQCRQ	O14949	82 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	CTRL	P40313	264 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	C11orf45	Q8TAV5	145 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	PTH2	Q96A98	100 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	PLXNA1	Q9UIW2	1896 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	TP53BP1	Q12888	1972 aa	Predicted RBP	13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	IGLV3-1	P01715	115 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	C11orf53	Q8IXP5	236 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	SCN5A	Q14524	2016 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	TAF1L	Q8IZX4	1826 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	TRBV6-1	A0A0K0K1D8	114 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	TEX49	A0A1B0GTD5	131 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216		Q8N9W7	124 aa		13.1	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	ODF1	Q14990	250 aa		13.09	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	SDIM1	Q6ZPB5	146 aa		13.09	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	CACNA1G	O43497	2377 aa		13.09	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	INSL3	P51460	131 aa		13.09	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	GRN	P28799	593 aa	Known RBP	13.09	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	TCL1B	O95988	128 aa		13.09	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	TDRG1	Q3Y452	100 aa		13.08	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	SCX	Q7RTU7	201 aa		13.08	□□□□□ -0.31
ZSWIM8-223	ENST00000605216	SPTBN2	O15020	2390 aa		13.08	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	MDFIC	Q9P1T7	246 aa		13.08	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	ZFAND2A	Q8N6M9	145 aa		13.08	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	REG3A	Q06141	175 aa		13.08	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	DOCK11	Q5JSL3	2073 aa		13.08	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	C10orf105	Q8TEF2	133 aa		13.08	□□□□□ -0.32
ZSWIM8-223	ENST00000605216		A0A0G2JMZ2	1700 aa		13.07	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	LRRC37A2	A6NM11	1700 aa		13.07	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	COL4A1	P02462	1669 aa		13.07	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	IGKV1D-37	A0A075B6S9	117 aa		13.07	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	ENHO	Q6UWT2	76 aa		13.07	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	LYPD6	Q86Y78	171 aa		13.07	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	NDUFV3	P56181	108 aa	Known RBP	13.07	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	LINC00269	Q8N2A0	174 aa		13.07	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	SIRPD	Q9H106	197 aa		13.07	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	LY6G6E	A0A0G2JKS1	128 aa		13.06	□□□□□ -0.32
ZSWIM8-223	ENST00000605216		U3KQA8	63 aa		13.06	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	DOCK6	Q96HP0	2047 aa		13.06	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	GREB1	Q4ZG55	1949 aa		13.05	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	IGLC6	P0CF74	106 aa		13.05	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	COL5A3	P25940	1745 aa	Predicted RBP	13.05	□□□□□ -0.32
ZSWIM8-223	ENST00000605216		A0A0J9YXY3	114 aa		13.05	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	SPRN	Q5BIV9	151 aa		13.05	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	ATP5E	P56381	51 aa	Predicted RBP	13.04	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.04	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	CRYGD	P07320	174 aa		13.04	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	WT1	P19544	449 aa	Predicted RBP	13.04	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	SLX1A	Q9BQ83	275 aa		13.04	□□□□□ -0.32
ZSWIM8-223	ENST00000605216		A0A0J9YX75	114 aa		13.03	□□□□□ -0.32
ZSWIM8-223	ENST00000605216		A0A0J9YWU9	116 aa		13.03	□□□□□ -0.32
ZSWIM8-223	ENST00000605216		A6NED7	52 aa		13.03	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	FAM167A-AS1	Q96KT0	104 aa		13.03	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	DOCK3	Q8IZD9	2030 aa		13.03	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	NACA	E9PAV3	2078 aa		13.03	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.03	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	C7orf33	Q8WU49	177 aa		13.02	□□□□□ -0.32
ZSWIM8-223	ENST00000605216	MAP6D1	Q9H9H5	199 aa		13.02	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms