RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 NUP98P52948 1817 aa1.37□□□□□ -2.19
SGMS1-207ENST00000602619 DIP2BQ9P265 1576 aa1.37□□□□□ -2.19
SGMS1-207ENST00000602619 CHD1O14646 1710 aa1.37□□□□□ -2.19
SGMS1-207ENST00000602619 PEAK1Q9H792 1746 aa1.37□□□□□ -2.19
SGMS1-207ENST00000602619 FER1L6Q2WGJ9 1857 aa1.37□□□□□ -2.19
SGMS1-207ENST00000602619 NYNRINQ9P2P1 1898 aaKnown RBP1.37□□□□□ -2.19
SGMS1-207ENST00000602619 N4BP2Q86UW6 1770 aaPredicted RBP1.36□□□□□ -2.19
SGMS1-207ENST00000602619 TOPAZ1Q8N9V7 1692 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 POLEQ07864 2286 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 TRBV6-8A0A0A6YYG3 113 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 FAM24AA6NFZ4 105 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 CCL25O15444 150 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 PITX3O75364 302 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 IGHV3-33P01772 117 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 NPC2P61916 151 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 RHOHQ15669 191 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 KRTAP26-1Q6PEX3 210 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 ZCCHC23Q6ZST2 131 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 FP248Q71RG6 208 aaPredicted RBP1.36□□□□□ -2.19
SGMS1-207ENST00000602619 LINC00526Q96FQ7 95 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 AQP10Q96PS8 301 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 CRCT1Q9UGL9 99 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 KLK9Q9UKQ9 250 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 AKAP12Q02952 1782 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 PHRF1Q9P1Y6 1649 aaKnown RBP1.36□□□□□ -2.19
SGMS1-207ENST00000602619 PXDNQ92626 1479 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 MYH10P35580 1976 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 SLX4Q8IY92 1834 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 SPEF2Q9C093 1822 aa1.36□□□□□ -2.19
SGMS1-207ENST00000602619 FAM208AQ9UK61 1670 aaKnown RBP1.35□□□□□ -2.19
SGMS1-207ENST00000602619 SBF1O95248 1867 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 RICTORQ6R327 1708 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 WDR90Q96KV7 1748 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 C10orf71Q711Q0 1435 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 TRAV17A0A0B4J275 112 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 CCL16O15467 120 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 GYPBP06028 91 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 SPINK8P0C7L1 97 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 COL5A1-AS1Q5SY13 56 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.35□□□□□ -2.19
SGMS1-207ENST00000602619 LINC00299Q6ZSB3 139 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 SPACA4Q8TDM5 124 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 TSKUQ8WUA8 353 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 TMEM141Q96I45 108 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 LINC00052Q96N35 136 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 LRP6O75581 1613 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 SCN9AQ15858 1988 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 MALRD1Q5VYJ5 2156 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 ADAMTS7Q9UKP4 1686 aa1.35□□□□□ -2.19
SGMS1-207ENST00000602619 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.35□□□□□ -2.19
SGMS1-207ENST00000602619 GLI3P10071 1580 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 EML6Q6ZMW3 1958 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 SCN8AQ9UQD0 1980 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 MAP2P11137 1827 aaKnown RBP1.34□□□□□ -2.19
SGMS1-207ENST00000602619 TCRBV3S1A0A5B6 114 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 TMEM30CPA0ZSE6 113 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 IGKV4-1P06312 121 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 S100A10P60903 97 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 C10orf55Q5SWW7 151 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 NCMAPQ5T1S8 102 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 Q6ZS92 163 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 COA5Q86WW8 74 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 TTC9CQ8N5M4 171 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 PATE1Q8WXA2 126 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 NDUFA12Q9UI09 145 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 LMO7Q8WWI1 1683 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 NUP210LQ5VU65 1888 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 ANKRD31Q8N7Z5 1873 aa1.34□□□□□ -2.19
SGMS1-207ENST00000602619 PTPRSQ13332 1948 aa1.34□□□□□ -2.2
SGMS1-207ENST00000602619 KDM3BQ7LBC6 1761 aa1.34□□□□□ -2.2
SGMS1-207ENST00000602619 KIAA2026Q5HYC2 2103 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 GREB1Q4ZG55 1949 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 DLG5Q8TDM6 1919 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 TIAM2Q8IVF5 1701 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 TRBV6-5A0A0K0K1A5 114 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 TRBV6-4A0A1B0GX49 114 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 NUPR1O60356 82 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 CBLN1P23435 193 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 SNRPFP62306 86 aaKnown RBP1.33□□□□□ -2.2
SGMS1-207ENST00000602619 NDUFA11Q86Y39 141 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 C4orf33Q8N1A6 199 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 LSM10Q969L4 123 aaKnown RBP1.33□□□□□ -2.2
SGMS1-207ENST00000602619 ATG5Q9H1Y0 275 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 Q9H521 79 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 AP4S1Q9Y587 144 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 TRPM6Q9BX84 2022 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 LRP5O75197 1615 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 PLIN4Q96Q06 1357 aa1.33□□□□□ -2.2
SGMS1-207ENST00000602619 CACNA1DQ01668 2161 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 SDK2Q58EX2 2172 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 UBR1Q8IWV7 1749 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 FMN2Q9NZ56 1722 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 KCPQ6ZWJ8 1503 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 IGLV3-32A0A0A0MS00 114 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 A0A0J9YY99 117 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 SMIM31A0A1B0GVY4 71 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 LINC00032P0C843 101 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 IL7P13232 177 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 ATP5EP56381 51 aaPredicted RBP1.32□□□□□ -2.2
SGMS1-207ENST00000602619 MPV17LQ2QL34 196 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms