RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 DNAH8Q96JB1 4490 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 GRIFINA4D1Z8 144 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 TMEM250H0YL14 139 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 SIVA1O15304 175 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 DNAH10OSP0CZ25 163 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 SRIP30626 198 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 LINC00315P59091 139 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 BLOC1S1P78537 153 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 RPL19P84098 196 aaKnown RBP5.97□□□□□ -1.45
SSBP4-208ENST00000600628 TNP2Q05952 138 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 RHOHQ15669 191 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 CENPWQ5EE01 88 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 TTC32Q5I0X7 151 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 PRR27Q6MZM9 219 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 COMMD7Q86VX2 200 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 KIF25-AS1Q9Y6Z4 181 aa5.97□□□□□ -1.45
SSBP4-208ENST00000600628 RAB19A4D1S5 217 aa5.96□□□□□ -1.46
SSBP4-208ENST00000600628 RHODO00212 210 aa5.96□□□□□ -1.46
SSBP4-208ENST00000600628 IFNA1P01562 189 aa5.96□□□□□ -1.46
SSBP4-208ENST00000600628 S100A4P26447 101 aaKnown RBP5.96□□□□□ -1.46
SSBP4-208ENST00000600628 TMSB15BA0A087X1C1 80 aa5.95□□□□□ -1.46
SSBP4-208ENST00000600628 K7EN84 100 aa5.95□□□□□ -1.46
SSBP4-208ENST00000600628 GNG4P50150 75 aa5.95□□□□□ -1.46
SSBP4-208ENST00000600628 WFDC10BQ8IUB3 73 aa5.95□□□□□ -1.46
SSBP4-208ENST00000600628 ZFP82Q8N141 532 aa5.95□□□□□ -1.46
SSBP4-208ENST00000600628 C14orf178Q8N769 122 aaPredicted RBP5.95□□□□□ -1.46
SSBP4-208ENST00000600628 OR10G8Q8NGN5 311 aa5.95□□□□□ -1.46
SSBP4-208ENST00000600628 OR10AG1Q8NH19 301 aa5.95□□□□□ -1.46
SSBP4-208ENST00000600628 PCNPQ8WW12 178 aaKnown RBP5.95□□□□□ -1.46
SSBP4-208ENST00000600628 CNFNQ9BYD5 112 aa5.95□□□□□ -1.46
SSBP4-208ENST00000600628 GTSF1LQ9H1H1 148 aa5.95□□□□□ -1.46
SSBP4-208ENST00000600628 PHLDA3Q9Y5J5 127 aa5.95□□□□□ -1.46
SSBP4-208ENST00000600628 IGHV3-73A0A0B4J1V6 119 aa5.94□□□□□ -1.46
SSBP4-208ENST00000600628 TRBV10-1A0A0K0K1A3 114 aa5.94□□□□□ -1.46
SSBP4-208ENST00000600628 RBFOX3A6NFN3 312 aa5.94□□□□□ -1.46
SSBP4-208ENST00000600628 LINC01556Q5JQF7 62 aa5.94□□□□□ -1.46
SSBP4-208ENST00000600628 TOR2AQ5JU69 321 aa5.94□□□□□ -1.46
SSBP4-208ENST00000600628 SYT8Q8NBV8 401 aa5.94□□□□□ -1.46
SSBP4-208ENST00000600628 PRADC1Q9BSG0 188 aa5.94□□□□□ -1.46
SSBP4-208ENST00000600628 LY96Q9Y6Y9 160 aa5.94□□□□□ -1.46
SSBP4-208ENST00000600628 CTRLP40313 264 aa5.93□□□□□ -1.46
SSBP4-208ENST00000600628 RAB4BP61018 213 aa5.93□□□□□ -1.46
SSBP4-208ENST00000600628 LELP1Q5T871 98 aa5.93□□□□□ -1.46
SSBP4-208ENST00000600628 WDR73Q6P4I2 378 aa5.93□□□□□ -1.46
SSBP4-208ENST00000600628 OCC1Q8TAD7 63 aa5.93□□□□□ -1.46
SSBP4-208ENST00000600628 TRAV9-2A0A087WT02 112 aa5.92□□□□□ -1.46
SSBP4-208ENST00000600628 A0A087WWL8 130 aa5.92□□□□□ -1.46
SSBP4-208ENST00000600628 M0R381 172 aa5.92□□□□□ -1.46
SSBP4-208ENST00000600628 RPS20P60866 119 aaKnown RBP5.92□□□□□ -1.46
SSBP4-208ENST00000600628 UBE2D3P61077 147 aa5.92□□□□□ -1.46
SSBP4-208ENST00000600628 UBE2D2P62837 147 aa5.92□□□□□ -1.46
SSBP4-208ENST00000600628 UQCC3Q6UW78 93 aa5.92□□□□□ -1.46
SSBP4-208ENST00000600628 FAM231DQ6ZW35 169 aa5.92□□□□□ -1.46
SSBP4-208ENST00000600628 NUDT10Q8NFP7 164 aa5.92□□□□□ -1.46
SSBP4-208ENST00000600628 ATP6V0E2Q8NHE4 81 aa5.92□□□□□ -1.46
SSBP4-208ENST00000600628 NUDT11Q96G61 164 aa5.92□□□□□ -1.46
SSBP4-208ENST00000600628 BIN3Q9NQY0 253 aa5.92□□□□□ -1.46
SSBP4-208ENST00000600628 IGHV3-38A0A0C4DH36 116 aa5.91□□□□□ -1.46
SSBP4-208ENST00000600628 IBA57-AS1B1ANH7 110 aa5.91□□□□□ -1.46
SSBP4-208ENST00000600628 F2Z2F3 143 aa5.91□□□□□ -1.46
SSBP4-208ENST00000600628 SRP19P09132 144 aaKnown RBP5.91□□□□□ -1.46
SSBP4-208ENST00000600628 GZMBP10144 247 aa5.91□□□□□ -1.46
SSBP4-208ENST00000600628 FOXA3P55318 350 aaPredicted RBP5.91□□□□□ -1.46
SSBP4-208ENST00000600628 OR2D3Q8NGH3 330 aa5.91□□□□□ -1.46
SSBP4-208ENST00000600628 MSRB1Q9NZV6 116 aa5.91□□□□□ -1.46
SSBP4-208ENST00000600628 TNFRSF18Q9Y5U5 241 aa5.91□□□□□ -1.46
SSBP4-208ENST00000600628 FAT1Q14517 4588 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 TRBV7-3A0A075B6L6 115 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 C16orf90A8MZG2 172 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 C9JQL5 133 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 P01737 135 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 EVI2AP22794 236 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 LAGE3Q14657 143 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 CT83Q5H943 113 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 FAM74A4Q5TZK3 123 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 C10orf126Q8N4M7 172 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 FER1L6-AS1Q8NA97 138 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 NEXN-AS1Q8NBZ9 246 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 GTSF1Q8WW33 167 aa5.9□□□□□ -1.46
SSBP4-208ENST00000600628 A0A087WWC5 75 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 MUC21A0A0G2JKD1 596 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 MUC21A0A140T8X8 626 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 GAGE12JA6NER3 117 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 M0QY20 66 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 CACNG7P62955 275 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 GAGE1Q13065 139 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 GAGE4Q13068 117 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 GAGE5Q13069 117 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 GAGE13Q4V321 117 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 LYZL1Q6UWQ5 148 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 SPATA12Q7Z6I5 190 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 LINC01551Q86U37 167 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 NFE4Q86UQ8 179 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 Q8N3U1 123 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 DAZAP1Q96EP5 407 aaKnown RBP5.89□□□□□ -1.47
SSBP4-208ENST00000600628 AP1S3Q96PC3 154 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 RNASE7Q9H1E1 156 aaKnown RBP5.89□□□□□ -1.47
SSBP4-208ENST00000600628 SMDT1Q9H4I9 107 aa5.89□□□□□ -1.47
SSBP4-208ENST00000600628 RPP21Q9H633 154 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms