RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 TRAV1-1A0A0B4J248 108 aa10.57□□□□□ -0.72
IRF3-226ENST00000600453 IBA57-AS1B1ANH7 110 aa10.57□□□□□ -0.72
IRF3-226ENST00000600453 PSCAO43653 123 aa10.57□□□□□ -0.72
IRF3-226ENST00000600453 BLOC1S1P78537 153 aa10.57□□□□□ -0.72
IRF3-226ENST00000600453 UFSP1Q6NVU6 142 aa10.57□□□□□ -0.72
IRF3-226ENST00000600453 Q6ZSN1 163 aa10.57□□□□□ -0.72
IRF3-226ENST00000600453 LINC00862A6NCI5 91 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 GAGE12JA6NER3 117 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 CXCL1P09341 107 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 SULT1A2P50226 295 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 GAGE1Q13065 139 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 GAGE4Q13068 117 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 GAGE5Q13069 117 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 GAGE13Q4V321 117 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 ALKAL2Q6UX46 152 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 MLST8Q9BVC4 326 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 KRTAP17-1Q9BYP8 105 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 JPT2Q9H910 190 aa10.56□□□□□ -0.72
IRF3-226ENST00000600453 SCO2A0A1W2PP80 73 aa10.55□□□□□ -0.72
IRF3-226ENST00000600453 M0R381 172 aa10.55□□□□□ -0.72
IRF3-226ENST00000600453 FAM74A4Q5TZK3 123 aa10.55□□□□□ -0.72
IRF3-226ENST00000600453 SAMD10Q9BYL1 202 aa10.55□□□□□ -0.72
IRF3-226ENST00000600453 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
IRF3-226ENST00000600453 LAGE3Q14657 143 aa10.54□□□□□ -0.72
IRF3-226ENST00000600453 TOR2AQ5JU69 321 aa10.54□□□□□ -0.72
IRF3-226ENST00000600453 MAPKAPK5-AS1Q8N8E1 139 aa10.54□□□□□ -0.72
IRF3-226ENST00000600453 TM2D2Q9BX73 214 aa10.54□□□□□ -0.72
IRF3-226ENST00000600453 IGHV3-30P01768 117 aa10.53□□□□□ -0.72
IRF3-226ENST00000600453 IGHV3-33P01772 117 aa10.53□□□□□ -0.72
IRF3-226ENST00000600453 LINC00694P0DN24 101 aa10.53□□□□□ -0.72
IRF3-226ENST00000600453 IGHV3-30-3P0DP02 117 aa10.53□□□□□ -0.72
IRF3-226ENST00000600453 IGHV3-30-5P0DP03 117 aa10.53□□□□□ -0.72
IRF3-226ENST00000600453 C14orf178Q8N769 122 aaPredicted RBP10.53□□□□□ -0.72
IRF3-226ENST00000600453 GNG13Q9P2W3 67 aa10.53□□□□□ -0.72
IRF3-226ENST00000600453 A0A087WWL8 130 aa10.52□□□□□ -0.73
IRF3-226ENST00000600453 TRAV8-3A0A0A6YYJ7 113 aa10.52□□□□□ -0.73
IRF3-226ENST00000600453 IFNA1P01562 189 aa10.52□□□□□ -0.73
IRF3-226ENST00000600453 RPL35P42766 123 aaKnown RBP10.52□□□□□ -0.73
IRF3-226ENST00000600453 RPL36AP83881 106 aaKnown RBP10.52□□□□□ -0.73
IRF3-226ENST00000600453 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.52□□□□□ -0.73
IRF3-226ENST00000600453 RPL36ALQ969Q0 106 aaKnown RBP10.52□□□□□ -0.73
IRF3-226ENST00000600453 DAZAP1Q96EP5 407 aaKnown RBP10.52□□□□□ -0.73
IRF3-226ENST00000600453 SSBP4Q9BWG4 385 aaPredicted RBP10.52□□□□□ -0.73
IRF3-226ENST00000600453 URGCP-MRPS24S4R325 110 aa10.52□□□□□ -0.73
IRF3-226ENST00000600453 PDE6DO43924 150 aa10.51□□□□□ -0.73
IRF3-226ENST00000600453 OR5AL1P0C617 328 aa10.51□□□□□ -0.73
IRF3-226ENST00000600453 S100A1P23297 94 aa10.51□□□□□ -0.73
IRF3-226ENST00000600453 RAB4BP61018 213 aa10.51□□□□□ -0.73
IRF3-226ENST00000600453 CCL20P78556 96 aa10.51□□□□□ -0.73
IRF3-226ENST00000600453 SPANXN1Q5VSR9 72 aa10.51□□□□□ -0.73
IRF3-226ENST00000600453 PRR27Q6MZM9 219 aa10.51□□□□□ -0.73
IRF3-226ENST00000600453 C11orf52Q96A22 123 aa10.51□□□□□ -0.73
IRF3-226ENST00000600453 SMIM12Q96EX1 92 aa10.51□□□□□ -0.73
IRF3-226ENST00000600453 TRBV7-3A0A075B6L6 115 aa10.5□□□□□ -0.73
IRF3-226ENST00000600453 SNAI2O43623 268 aa10.5□□□□□ -0.73
IRF3-226ENST00000600453 TAGLN2P37802 199 aaKnown RBP10.5□□□□□ -0.73
IRF3-226ENST00000600453 KCNIP4Q6PIL6 250 aa10.5□□□□□ -0.73
IRF3-226ENST00000600453 Q8N1X5 172 aa10.5□□□□□ -0.73
IRF3-226ENST00000600453 NTN5Q8WTR8 489 aaPredicted RBP10.5□□□□□ -0.73
IRF3-226ENST00000600453 Q9HAA7 133 aa10.5□□□□□ -0.73
IRF3-226ENST00000600453 BIN3Q9NQY0 253 aa10.5□□□□□ -0.73
IRF3-226ENST00000600453 COX11Q9Y6N1 276 aa10.5□□□□□ -0.73
IRF3-226ENST00000600453 RPS20P60866 119 aaKnown RBP10.49□□□□□ -0.73
IRF3-226ENST00000600453 RPL19P84098 196 aaKnown RBP10.49□□□□□ -0.73
IRF3-226ENST00000600453 ELOBQ15370 118 aa10.49□□□□□ -0.73
IRF3-226ENST00000600453 XKRY2A2RUG3 117 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 RAB19A4D1S5 217 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 SMIM17P0DL12 118 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 GCSHP23434 173 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 GNG4P50150 75 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 MEF2BQ02080 365 aaPredicted RBP10.48□□□□□ -0.73
IRF3-226ENST00000600453 UQCC3Q6UW78 93 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 OR10G8Q8NGN5 311 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 OR10AG1Q8NH19 301 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 LYPD6BQ8NI32 183 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 RMI2Q96E14 147 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 CHCHD7Q9BUK0 85 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 Q9UF83 564 aa10.48□□□□□ -0.73
IRF3-226ENST00000600453 LRCOL1A6NCL2 159 aa10.47□□□□□ -0.73
IRF3-226ENST00000600453 F5H697 171 aa10.47□□□□□ -0.73
IRF3-226ENST00000600453 ZNF56Q15929 161 aa10.47□□□□□ -0.73
IRF3-226ENST00000600453 SMDT1Q9H4I9 107 aa10.47□□□□□ -0.73
IRF3-226ENST00000600453 A0A087WX48 190 aa10.46□□□□□ -0.73
IRF3-226ENST00000600453 UBE2D3P61077 147 aa10.46□□□□□ -0.73
IRF3-226ENST00000600453 UBE2D2P62837 147 aa10.46□□□□□ -0.73
IRF3-226ENST00000600453 CENPWQ5EE01 88 aa10.46□□□□□ -0.73
IRF3-226ENST00000600453 NIT1Q86X76 327 aa10.46□□□□□ -0.73
IRF3-226ENST00000600453 DERL1Q9BUN8 251 aa10.46□□□□□ -0.73
IRF3-226ENST00000600453 VAX2Q9UIW0 290 aa10.46□□□□□ -0.73
IRF3-226ENST00000600453 LRP1BQ9NZR2 4599 aa10.46□□□□□ -0.74
IRF3-226ENST00000600453 RYR1P21817 5038 aa10.46□□□□□ -0.74
IRF3-226ENST00000600453 IGLV5-52A0A0A0MRZ9 124 aa10.45□□□□□ -0.74
IRF3-226ENST00000600453 ATP6V1G1O75348 118 aa10.45□□□□□ -0.74
IRF3-226ENST00000600453 BCL2P10415 239 aa10.45□□□□□ -0.74
IRF3-226ENST00000600453 TMEM97Q5BJF2 176 aa10.45□□□□□ -0.74
IRF3-226ENST00000600453 DAZ4Q86SG3 579 aaKnown RBP10.45□□□□□ -0.74
IRF3-226ENST00000600453 DAZ3Q9NR90 486 aaKnown RBP10.45□□□□□ -0.74
IRF3-226ENST00000600453 F2Z2F3 143 aa10.44□□□□□ -0.74
IRF3-226ENST00000600453 P01737 135 aa10.44□□□□□ -0.74
IRF3-226ENST00000600453 PKIAP61925 76 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms