RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 C5orf17Q8NAS9 161 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 OR10G9Q8NGN4 311 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 OR10G7Q8NGN6 311 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 PPP1R1CQ8WVI7 109 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 CCDC32Q9BV29 185 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 SMIM3Q9BZL3 60 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 IL36BQ9NZH7 164 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 EPDR1Q9UM22 224 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 A0A1W2PPV4 95 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 FABP5P3A8MUU1 101 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 MPC2O95563 127 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 SEC11BP0C7V7 166 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 ARL14EPLP0DKL9 152 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 RPL12P30050 165 aaKnown RBP3.9□□□□□ -1.79
VRK3-220ENST00000600259 DEFA1P59665 94 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 DEFA3P59666 94 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 UBE2D3P61077 147 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 UBE2D2P62837 147 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 Q0VG73 95 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 CIRBPQ14011 172 aaKnown RBP3.9□□□□□ -1.79
VRK3-220ENST00000600259 SAPCD1Q5SSQ6 148 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 DGAT2L7PQ6IED9 249 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 PRNTQ86SH4 94 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 SCGB1C1Q8TD33 95 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 SFRP2Q96HF1 295 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 NDFIP1Q9BT67 221 aa3.9□□□□□ -1.79
VRK3-220ENST00000600259 A0A087WX48 190 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 TRAV34A0A0B4J273 112 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 KRBOX1C9JBD0 128 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 USP17L23D6RBM5 183 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 H2AFB1P0C5Y9 115 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 ARMS2P0C7Q2 107 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 GCHFRP30047 84 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 IFITM2Q01629 132 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 ELOBQ15370 118 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 C14orf177Q52M58 125 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 COX8CQ7Z4L0 72 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 OR10G8Q8NGN5 311 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 RAB24Q969Q5 203 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 PRR34Q9NV39 138 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 URGCP-MRPS24S4R325 110 aa3.89□□□□□ -1.79
VRK3-220ENST00000600259 TRBV7-3A0A075B6L6 115 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 A0A087WWL8 130 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 TRBV6-8A0A0A6YYG3 113 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 TRBV10-1A0A0K0K1A3 114 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 GRIFINA4D1Z8 144 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 H3BVH4 76 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 RHODO00212 210 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 SLPIP03973 132 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 S100A4P26447 101 aaKnown RBP3.88□□□□□ -1.79
VRK3-220ENST00000600259 ASIPP42127 132 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 CDC34P49427 236 aaPredicted RBP3.88□□□□□ -1.79
VRK3-220ENST00000600259 ODF1Q14990 250 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 MPV17L2Q567V2 206 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 PRR27Q6MZM9 219 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 MZT2BQ6NZ67 158 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 NTM-AS1Q6ZSK4 140 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 OR2G3Q8NGZ4 309 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 MARVELD1Q9BSK0 173 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 C1orf43Q9BWL3 253 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 ARL2-SNX15V9GYD0 113 aa3.88□□□□□ -1.79
VRK3-220ENST00000600259 A0A1W2PRE2 83 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 B4DEV8 164 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 TMEM262E9PQX1 116 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 INMT-MINDY4F8WBC2 141 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 K7EQM0 130 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 ATP6V0CP27449 155 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 KRTAP10-8P60410 259 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 RPL36AP83881 106 aaKnown RBP3.87□□□□□ -1.79
VRK3-220ENST00000600259 RPL19P84098 196 aaKnown RBP3.87□□□□□ -1.79
VRK3-220ENST00000600259 ZNF726P1Q15940 193 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 ZFP69Q49AA0 526 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 SLC7A5P1Q8MH63 180 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 C15orf54Q8N8G6 183 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 NEXN-AS1Q8NBZ9 246 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 RPL36ALQ969Q0 106 aaKnown RBP3.87□□□□□ -1.79
VRK3-220ENST00000600259 ZC2HC1AQ96GY0 325 aa3.87□□□□□ -1.79
VRK3-220ENST00000600259 A0A087WYN8 130 aa3.86□□□□□ -1.79
VRK3-220ENST00000600259 M0R036 132 aa3.86□□□□□ -1.79
VRK3-220ENST00000600259 SH2D1AO60880 128 aa3.86□□□□□ -1.79
VRK3-220ENST00000600259 CXorf1O96002 111 aa3.86□□□□□ -1.79
VRK3-220ENST00000600259 CNBPP62633 177 aaKnown RBP3.86□□□□□ -1.79
VRK3-220ENST00000600259 SERF2P84101 59 aa3.86□□□□□ -1.79
VRK3-220ENST00000600259 MIAQ16674 131 aa3.86□□□□□ -1.79
VRK3-220ENST00000600259 ZNF674Q2M3X9 581 aa3.86□□□□□ -1.79
VRK3-220ENST00000600259 FAM74A4Q5TZK3 123 aa3.86□□□□□ -1.79
VRK3-220ENST00000600259 OR11H4Q8NGC9 324 aa3.86□□□□□ -1.79
VRK3-220ENST00000600259 LINC01600Q96MT4 127 aa3.86□□□□□ -1.79
VRK3-220ENST00000600259 PSMG3Q9BT73 122 aaPredicted RBP3.86□□□□□ -1.79
VRK3-220ENST00000600259 TMEM167BQ9NRX6 74 aa3.86□□□□□ -1.79
VRK3-220ENST00000600259 A0A0D9SG52 128 aa3.85□□□□□ -1.79
VRK3-220ENST00000600259 TRBV6-1A0A0K0K1D8 114 aa3.85□□□□□ -1.79
VRK3-220ENST00000600259 M0R381 172 aa3.85□□□□□ -1.79
VRK3-220ENST00000600259 PEX7O00628 323 aa3.85□□□□□ -1.79
VRK3-220ENST00000600259 ANGP03950 147 aaKnown RBP3.85□□□□□ -1.79
VRK3-220ENST00000600259 CHTF8P0CG12 524 aa3.85□□□□□ -1.79
VRK3-220ENST00000600259 RAB4BP61018 213 aa3.85□□□□□ -1.79
VRK3-220ENST00000600259 RBX1P62877 108 aa3.85□□□□□ -1.79
VRK3-220ENST00000600259 Q86TA4 180 aa3.85□□□□□ -1.79
VRK3-220ENST00000600259 TCTE3Q8IZS6 198 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms