RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ERVFC1-1P60608 527 aa9.51□□□□□ -0.89
VRK3-219ENST00000600137 CT83Q5H943 113 aa9.51□□□□□ -0.89
VRK3-219ENST00000600137 SLC25A29Q8N8R3 303 aa9.51□□□□□ -0.89
VRK3-219ENST00000600137 CNFNQ9BYD5 112 aa9.51□□□□□ -0.89
VRK3-219ENST00000600137 V9GYV3 84 aa9.51□□□□□ -0.89
VRK3-219ENST00000600137 A0A087WWL8 130 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 TRBV6-4A0A1B0GX49 114 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 A0A1W2PPQ1 181 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 XKRY2A2RUG3 117 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 LINC00862A6NCI5 91 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 K7EQD1 137 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 P0DMU3 169 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 FAM231AP0DMU4 169 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 FAM231CP0DMU5 169 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 ESRGQ1W209 222 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 RNF212Q495C1 297 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 WDR73Q6P4I2 378 aa9.5□□□□□ -0.89
VRK3-219ENST00000600137 DNAH17Q9UFH2 4485 aa9.49□□□□□ -0.89
VRK3-219ENST00000600137 F2Z2F3 143 aa9.49□□□□□ -0.89
VRK3-219ENST00000600137 SSTP61278 116 aa9.49□□□□□ -0.89
VRK3-219ENST00000600137 C14orf178Q8N769 122 aaPredicted RBP9.49□□□□□ -0.89
VRK3-219ENST00000600137 LINC00588Q9Y4M8 146 aa9.49□□□□□ -0.89
VRK3-219ENST00000600137 A8MWL6 223 aa9.48□□□□□ -0.89
VRK3-219ENST00000600137 GYPEP15421 78 aa9.48□□□□□ -0.89
VRK3-219ENST00000600137 ADCYAP1P18509 176 aa9.48□□□□□ -0.89
VRK3-219ENST00000600137 NTF3P20783 257 aa9.48□□□□□ -0.89
VRK3-219ENST00000600137 ADIRFQ15847 76 aa9.48□□□□□ -0.89
VRK3-219ENST00000600137 SPANXN1Q5VSR9 72 aa9.48□□□□□ -0.89
VRK3-219ENST00000600137 UQCC3Q6UW78 93 aa9.48□□□□□ -0.89
VRK3-219ENST00000600137 TMEM218A2RU14 115 aa9.47□□□□□ -0.89
VRK3-219ENST00000600137 FAM231BA6NCW3 169 aa9.47□□□□□ -0.89
VRK3-219ENST00000600137 RHODO00212 210 aa9.47□□□□□ -0.89
VRK3-219ENST00000600137 LINC00694P0DN24 101 aa9.47□□□□□ -0.89
VRK3-219ENST00000600137 CACNG7P62955 275 aa9.47□□□□□ -0.89
VRK3-219ENST00000600137 MRPL23Q16540 153 aaKnown RBP9.47□□□□□ -0.89
VRK3-219ENST00000600137 OR10G8Q8NGN5 311 aa9.47□□□□□ -0.89
VRK3-219ENST00000600137 TSKUQ8WUA8 353 aa9.47□□□□□ -0.89
VRK3-219ENST00000600137 TPPP3Q9BW30 176 aa9.47□□□□□ -0.89
VRK3-219ENST00000600137 ICOSQ9Y6W8 199 aa9.47□□□□□ -0.89
VRK3-219ENST00000600137 FAM74A4Q5TZK3 123 aa9.46□□□□□ -0.9
VRK3-219ENST00000600137 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.9
VRK3-219ENST00000600137 ZNRF2Q8NHG8 242 aa9.46□□□□□ -0.9
VRK3-219ENST00000600137 GFRA4Q9GZZ7 299 aa9.46□□□□□ -0.9
VRK3-219ENST00000600137 EVI2AP22794 236 aa9.45□□□□□ -0.9
VRK3-219ENST00000600137 RHOHQ15669 191 aa9.45□□□□□ -0.9
VRK3-219ENST00000600137 NEGR1Q7Z3B1 354 aa9.45□□□□□ -0.9
VRK3-219ENST00000600137 COMMD7Q86VX2 200 aa9.45□□□□□ -0.9
VRK3-219ENST00000600137 C15orf54Q8N8G6 183 aa9.45□□□□□ -0.9
VRK3-219ENST00000600137 PGLYRP4Q96LB8 373 aa9.45□□□□□ -0.9
VRK3-219ENST00000600137 HIGD1CA8MV81 97 aa9.44□□□□□ -0.9
VRK3-219ENST00000600137 CCL18P55774 89 aa9.44□□□□□ -0.9
VRK3-219ENST00000600137 RAB4BP61018 213 aa9.44□□□□□ -0.9
VRK3-219ENST00000600137 NUP35Q8NFH5 326 aa9.44□□□□□ -0.9
VRK3-219ENST00000600137 PRADC1Q9BSG0 188 aa9.44□□□□□ -0.9
VRK3-219ENST00000600137 UPK3BQ9BT76 320 aa9.44□□□□□ -0.9
VRK3-219ENST00000600137 SMIM27A0A1W2PRY6 76 aa9.43□□□□□ -0.9
VRK3-219ENST00000600137 FAM3BP58499 235 aaPredicted RBP9.43□□□□□ -0.9
VRK3-219ENST00000600137 C10orf91Q5T1B1 145 aa9.43□□□□□ -0.9
VRK3-219ENST00000600137 AP1S3Q96PC3 154 aa9.43□□□□□ -0.9
VRK3-219ENST00000600137 MRPS16Q9Y3D3 137 aaKnown RBP9.43□□□□□ -0.9
VRK3-219ENST00000600137 FRAS1Q86XX4 4008 aa9.42□□□□□ -0.9
VRK3-219ENST00000600137 SRIP30626 198 aa9.42□□□□□ -0.9
VRK3-219ENST00000600137 TIRAPP58753 221 aa9.42□□□□□ -0.9
VRK3-219ENST00000600137 PNRC1Q12796 327 aaPredicted RBP9.42□□□□□ -0.9
VRK3-219ENST00000600137 TWIST1Q15672 202 aa9.42□□□□□ -0.9
VRK3-219ENST00000600137 TRBV10-1A0A0K0K1A3 114 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 GAGE12JA6NER3 117 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 M0QY20 66 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 GAGE1Q13065 139 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 GAGE4Q13068 117 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 GAGE5Q13069 117 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 GAGE13Q4V321 117 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 Q6ZR54 194 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 UBE2DNLQ8IWF7 75 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 NEXN-AS1Q8NBZ9 246 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 SEC11CQ9BY50 192 aa9.41□□□□□ -0.9
VRK3-219ENST00000600137 A0A1B0GUT8 65 aa9.4□□□□□ -0.9
VRK3-219ENST00000600137 F8W036 122 aa9.4□□□□□ -0.9
VRK3-219ENST00000600137 ZNF56Q15929 161 aa9.4□□□□□ -0.9
VRK3-219ENST00000600137 SH2D6Q7Z4S9 175 aa9.4□□□□□ -0.9
VRK3-219ENST00000600137 ATP6V0E2Q8NHE4 81 aa9.4□□□□□ -0.9
VRK3-219ENST00000600137 DPH3P1Q9H4G8 78 aa9.4□□□□□ -0.9
VRK3-219ENST00000600137 Q9H8V8 135 aa9.4□□□□□ -0.9
VRK3-219ENST00000600137 IGLV2-18A0A075B6J9 118 aa9.39□□□□□ -0.91
VRK3-219ENST00000600137 SMIM17P0DL12 118 aa9.39□□□□□ -0.91
VRK3-219ENST00000600137 UBE2D3P61077 147 aa9.39□□□□□ -0.91
VRK3-219ENST00000600137 UBE2D2P62837 147 aa9.39□□□□□ -0.91
VRK3-219ENST00000600137 SUMO4Q6EEV6 95 aa9.39□□□□□ -0.91
VRK3-219ENST00000600137 NAT8BQ9UHF3 227 aa9.39□□□□□ -0.91
VRK3-219ENST00000600137 FAT2Q9NYQ8 4349 aa9.39□□□□□ -0.91
VRK3-219ENST00000600137 TRBV7-3A0A075B6L6 115 aa9.38□□□□□ -0.91
VRK3-219ENST00000600137 F5H697 171 aa9.38□□□□□ -0.91
VRK3-219ENST00000600137 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
VRK3-219ENST00000600137 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
VRK3-219ENST00000600137 KRTAP1-5Q9BYS1 174 aa9.38□□□□□ -0.91
VRK3-219ENST00000600137 GTSF1LQ9H1H1 148 aa9.38□□□□□ -0.91
VRK3-219ENST00000600137 M0R2N4 97 aa9.37□□□□□ -0.91
VRK3-219ENST00000600137 PPP1R2P9O14990 202 aa9.37□□□□□ -0.91
VRK3-219ENST00000600137 MGPP08493 103 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms