RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 TRBV6-4A0A1B0GX49 114 aa10.45□□□□□ -0.74
LIG1-219ENST00000600055 P01737 135 aa10.45□□□□□ -0.74
LIG1-219ENST00000600055 RHOHQ15669 191 aa10.45□□□□□ -0.74
LIG1-219ENST00000600055 NDUFA5Q16718 116 aa10.45□□□□□ -0.74
LIG1-219ENST00000600055 FAM74A4Q5TZK3 123 aa10.45□□□□□ -0.74
LIG1-219ENST00000600055 PRADC1Q9BSG0 188 aa10.45□□□□□ -0.74
LIG1-219ENST00000600055 EPPK1P58107 5090 aaKnown RBP10.44□□□□□ -0.74
LIG1-219ENST00000600055 NXPH4O95158 308 aa10.44□□□□□ -0.74
LIG1-219ENST00000600055 CRYGDP07320 174 aa10.44□□□□□ -0.74
LIG1-219ENST00000600055 OR5AL1P0C617 328 aa10.44□□□□□ -0.74
LIG1-219ENST00000600055 TMEM241Q24JQ0 296 aa10.44□□□□□ -0.74
LIG1-219ENST00000600055 C14orf178Q8N769 122 aaPredicted RBP10.44□□□□□ -0.74
LIG1-219ENST00000600055 NUDT10Q8NFP7 164 aa10.44□□□□□ -0.74
LIG1-219ENST00000600055 NUDT11Q96G61 164 aa10.44□□□□□ -0.74
LIG1-219ENST00000600055 RNASE7Q9H1E1 156 aaKnown RBP10.44□□□□□ -0.74
LIG1-219ENST00000600055 Q9UF83 564 aa10.44□□□□□ -0.74
LIG1-219ENST00000600055 RTL8CO15255 209 aa10.43□□□□□ -0.74
LIG1-219ENST00000600055 IGLC6P0CF74 106 aa10.43□□□□□ -0.74
LIG1-219ENST00000600055 RPS20P60866 119 aaKnown RBP10.43□□□□□ -0.74
LIG1-219ENST00000600055 SRSF3P84103 164 aaKnown RBP10.43□□□□□ -0.74
LIG1-219ENST00000600055 TPPP3Q9BW30 176 aa10.43□□□□□ -0.74
LIG1-219ENST00000600055 KRTAP1-5Q9BYS1 174 aa10.43□□□□□ -0.74
LIG1-219ENST00000600055 NAT8Q9UHE5 227 aa10.43□□□□□ -0.74
LIG1-219ENST00000600055 GAGE12JA6NER3 117 aa10.42□□□□□ -0.74
LIG1-219ENST00000600055 C9JQL5 133 aa10.42□□□□□ -0.74
LIG1-219ENST00000600055 RHODO00212 210 aa10.42□□□□□ -0.74
LIG1-219ENST00000600055 GAGE1Q13065 139 aa10.42□□□□□ -0.74
LIG1-219ENST00000600055 GAGE4Q13068 117 aa10.42□□□□□ -0.74
LIG1-219ENST00000600055 GAGE5Q13069 117 aa10.42□□□□□ -0.74
LIG1-219ENST00000600055 GAGE13Q4V321 117 aa10.42□□□□□ -0.74
LIG1-219ENST00000600055 SPANXN1Q5VSR9 72 aa10.42□□□□□ -0.74
LIG1-219ENST00000600055 FER1L6-AS1Q8NA97 138 aa10.42□□□□□ -0.74
LIG1-219ENST00000600055 FRAS1Q86XX4 4008 aa10.42□□□□□ -0.74
LIG1-219ENST00000600055 XKRY2A2RUG3 117 aa10.4□□□□□ -0.74
LIG1-219ENST00000600055 SIVA1O15304 175 aa10.4□□□□□ -0.74
LIG1-219ENST00000600055 C1orf134Q5TEV5 83 aa10.4□□□□□ -0.74
LIG1-219ENST00000600055 SH2D6Q7Z4S9 175 aa10.4□□□□□ -0.74
LIG1-219ENST00000600055 WFDC10BQ8IUB3 73 aa10.4□□□□□ -0.74
LIG1-219ENST00000600055 RPP21Q9H633 154 aaKnown RBP10.4□□□□□ -0.74
LIG1-219ENST00000600055 MSRB1Q9NZV6 116 aa10.4□□□□□ -0.74
LIG1-219ENST00000600055 DNAH2Q9P225 4427 aa10.4□□□□□ -0.74
LIG1-219ENST00000600055 TMEM218A2RU14 115 aa10.39□□□□□ -0.75
LIG1-219ENST00000600055 LINC00694P0DN24 101 aa10.39□□□□□ -0.75
LIG1-219ENST00000600055 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
LIG1-219ENST00000600055 LYZL1Q6UWQ5 148 aa10.39□□□□□ -0.75
LIG1-219ENST00000600055 F8W036 122 aa10.38□□□□□ -0.75
LIG1-219ENST00000600055 LINC01551Q86U37 167 aa10.38□□□□□ -0.75
LIG1-219ENST00000600055 C6orf223Q8N319 242 aa10.38□□□□□ -0.75
LIG1-219ENST00000600055 C15orf54Q8N8G6 183 aa10.38□□□□□ -0.75
LIG1-219ENST00000600055 ATP6V0E2Q8NHE4 81 aa10.38□□□□□ -0.75
LIG1-219ENST00000600055 GATCO43716 136 aaKnown RBP10.37□□□□□ -0.75
LIG1-219ENST00000600055 TIRAPP58753 221 aa10.37□□□□□ -0.75
LIG1-219ENST00000600055 ZNF56Q15929 161 aa10.37□□□□□ -0.75
LIG1-219ENST00000600055 TTC32Q5I0X7 151 aa10.37□□□□□ -0.75
LIG1-219ENST00000600055 LINC00336Q6ZUF6 198 aa10.37□□□□□ -0.75
LIG1-219ENST00000600055 FAM231DQ6ZW35 169 aa10.37□□□□□ -0.75
LIG1-219ENST00000600055 SEC11CQ9BY50 192 aa10.37□□□□□ -0.75
LIG1-219ENST00000600055 GTSF1LQ9H1H1 148 aa10.37□□□□□ -0.75
LIG1-219ENST00000600055 KIF25-AS1Q9Y6Z4 181 aa10.37□□□□□ -0.75
LIG1-219ENST00000600055 A0A1W2PPQ1 181 aa10.36□□□□□ -0.75
LIG1-219ENST00000600055 PRSS29PA6NIE9 313 aa10.36□□□□□ -0.75
LIG1-219ENST00000600055 F2Z2F3 143 aa10.36□□□□□ -0.75
LIG1-219ENST00000600055 LINC00315P59091 139 aa10.36□□□□□ -0.75
LIG1-219ENST00000600055 ERVFC1-1P60608 527 aa10.36□□□□□ -0.75
LIG1-219ENST00000600055 RAB4BP61018 213 aa10.36□□□□□ -0.75
LIG1-219ENST00000600055 CACNG7P62955 275 aa10.36□□□□□ -0.75
LIG1-219ENST00000600055 ADIRFQ15847 76 aa10.36□□□□□ -0.75
LIG1-219ENST00000600055 GTSF1Q8WW33 167 aa10.36□□□□□ -0.75
LIG1-219ENST00000600055 AP1S3Q96PC3 154 aa10.36□□□□□ -0.75
LIG1-219ENST00000600055 DNAH17Q9UFH2 4485 aa10.35□□□□□ -0.75
LIG1-219ENST00000600055 F5H697 171 aa10.35□□□□□ -0.75
LIG1-219ENST00000600055 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
LIG1-219ENST00000600055 NTF3P20783 257 aa10.35□□□□□ -0.75
LIG1-219ENST00000600055 CTRLP40313 264 aa10.35□□□□□ -0.75
LIG1-219ENST00000600055 PPP1R2P9O14990 202 aa10.34□□□□□ -0.75
LIG1-219ENST00000600055 MGPP08493 103 aa10.34□□□□□ -0.75
LIG1-219ENST00000600055 RPL23P62829 140 aaKnown RBP10.34□□□□□ -0.75
LIG1-219ENST00000600055 OR10J3Q5JRS4 329 aa10.34□□□□□ -0.75
LIG1-219ENST00000600055 LELP1Q5T871 98 aa10.34□□□□□ -0.75
LIG1-219ENST00000600055 OSTCQ9NRP0 149 aa10.34□□□□□ -0.75
LIG1-219ENST00000600055 BIRC6Q9NR09 4857 aa10.33□□□□□ -0.76
LIG1-219ENST00000600055 TRBV10-1A0A0K0K1A3 114 aa10.33□□□□□ -0.76
LIG1-219ENST00000600055 A8MWL6 223 aa10.33□□□□□ -0.76
LIG1-219ENST00000600055 MT-ND4LP03901 98 aa10.33□□□□□ -0.76
LIG1-219ENST00000600055 DNAH10OSP0CZ25 163 aa10.33□□□□□ -0.76
LIG1-219ENST00000600055 EVI2AP22794 236 aa10.33□□□□□ -0.76
LIG1-219ENST00000600055 NEXN-AS1Q8NBZ9 246 aa10.33□□□□□ -0.76
LIG1-219ENST00000600055 TNFRSF18Q9Y5U5 241 aa10.33□□□□□ -0.76
LIG1-219ENST00000600055 FAT2Q9NYQ8 4349 aa10.33□□□□□ -0.76
LIG1-219ENST00000600055 TRAV8-6A0A0B4J262 113 aa10.32□□□□□ -0.76
LIG1-219ENST00000600055 A0A1B0GVY2 172 aa10.32□□□□□ -0.76
LIG1-219ENST00000600055 UBE2D3P61077 147 aa10.32□□□□□ -0.76
LIG1-219ENST00000600055 UBE2D2P62837 147 aa10.32□□□□□ -0.76
LIG1-219ENST00000600055 RPL36AP83881 106 aaKnown RBP10.32□□□□□ -0.76
LIG1-219ENST00000600055 TNP2Q05952 138 aa10.32□□□□□ -0.76
LIG1-219ENST00000600055 TWIST1Q15672 202 aa10.32□□□□□ -0.76
LIG1-219ENST00000600055 CT83Q5H943 113 aa10.32□□□□□ -0.76
LIG1-219ENST00000600055 WDR73Q6P4I2 378 aa10.32□□□□□ -0.76
LIG1-219ENST00000600055 OR10G8Q8NGN5 311 aa10.32□□□□□ -0.76
LIG1-219ENST00000600055 RPL36ALQ969Q0 106 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms