RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 NXPH4O95158 308 aa13.63□□□□□ -0.23
SHKBP1-214ENST00000597396 FAM3BP58499 235 aaPredicted RBP13.63□□□□□ -0.23
SHKBP1-214ENST00000597396 TMEM241Q24JQ0 296 aa13.63□□□□□ -0.23
SHKBP1-214ENST00000597396 FAM231DQ6ZW35 169 aa13.63□□□□□ -0.23
SHKBP1-214ENST00000597396 SLC25A29Q8N8R3 303 aa13.63□□□□□ -0.23
SHKBP1-214ENST00000597396 LINC00588Q9Y4M8 146 aa13.63□□□□□ -0.23
SHKBP1-214ENST00000597396 LOC100131303A0A0U1RQF7 123 aa13.62□□□□□ -0.23
SHKBP1-214ENST00000597396 A0A1W2PPQ1 181 aa13.62□□□□□ -0.23
SHKBP1-214ENST00000597396 ESRGQ1W209 222 aa13.62□□□□□ -0.23
SHKBP1-214ENST00000597396 SOHLH1Q5JUK2 328 aa13.62□□□□□ -0.23
SHKBP1-214ENST00000597396 NAT8Q9UHE5 227 aa13.62□□□□□ -0.23
SHKBP1-214ENST00000597396 F2Z2F3 143 aa13.61□□□□□ -0.23
SHKBP1-214ENST00000597396 CACNG7P62955 275 aa13.61□□□□□ -0.23
SHKBP1-214ENST00000597396 UFSP1Q6NVU6 142 aa13.61□□□□□ -0.23
SHKBP1-214ENST00000597396 NEGR1Q7Z3B1 354 aa13.61□□□□□ -0.23
SHKBP1-214ENST00000597396 CRYGDP07320 174 aa13.6□□□□□ -0.23
SHKBP1-214ENST00000597396 ADIRFQ15847 76 aa13.6□□□□□ -0.23
SHKBP1-214ENST00000597396 LYZL1Q6UWQ5 148 aa13.6□□□□□ -0.23
SHKBP1-214ENST00000597396 AP1S3Q96PC3 154 aa13.6□□□□□ -0.23
SHKBP1-214ENST00000597396 IGLV2-18A0A075B6J9 118 aa13.59□□□□□ -0.23
SHKBP1-214ENST00000597396 A8MWL6 223 aa13.59□□□□□ -0.23
SHKBP1-214ENST00000597396 SMIM17P0DL12 118 aa13.59□□□□□ -0.23
SHKBP1-214ENST00000597396 RPL23P62829 140 aaKnown RBP13.59□□□□□ -0.23
SHKBP1-214ENST00000597396 Q6ZSN1 163 aa13.59□□□□□ -0.23
SHKBP1-214ENST00000597396 SH2D6Q7Z4S9 175 aa13.59□□□□□ -0.23
SHKBP1-214ENST00000597396 C15orf54Q8N8G6 183 aa13.59□□□□□ -0.23
SHKBP1-214ENST00000597396 OSTCQ9NRP0 149 aa13.59□□□□□ -0.23
SHKBP1-214ENST00000597396 ISOC2Q96AB3 205 aa13.58□□□□□ -0.24
SHKBP1-214ENST00000597396 MRPS16Q9Y3D3 137 aaKnown RBP13.58□□□□□ -0.24
SHKBP1-214ENST00000597396 DNAH6Q9C0G6 4158 aa13.58□□□□□ -0.24
SHKBP1-214ENST00000597396 CTRLP40313 264 aa13.57□□□□□ -0.24
SHKBP1-214ENST00000597396 ZNF56Q15929 161 aa13.57□□□□□ -0.24
SHKBP1-214ENST00000597396 CT83Q5H943 113 aa13.57□□□□□ -0.24
SHKBP1-214ENST00000597396 C14orf178Q8N769 122 aaPredicted RBP13.57□□□□□ -0.24
SHKBP1-214ENST00000597396 ZNRF2Q8NHG8 242 aa13.57□□□□□ -0.24
SHKBP1-214ENST00000597396 KMT2AQ03164 3969 aa13.57□□□□□ -0.24
SHKBP1-214ENST00000597396 M0R2N4 97 aa13.56□□□□□ -0.24
SHKBP1-214ENST00000597396 LYPD5Q6UWN5 251 aa13.56□□□□□ -0.24
SHKBP1-214ENST00000597396 F5H697 171 aa13.55□□□□□ -0.24
SHKBP1-214ENST00000597396 TRGC1P0CF51 173 aa13.55□□□□□ -0.24
SHKBP1-214ENST00000597396 WDR73Q6P4I2 378 aa13.55□□□□□ -0.24
SHKBP1-214ENST00000597396 GTSF1Q8WW33 167 aa13.55□□□□□ -0.24
SHKBP1-214ENST00000597396 UPK3BQ9BT76 320 aa13.55□□□□□ -0.24
SHKBP1-214ENST00000597396 MSRB1Q9NZV6 116 aa13.55□□□□□ -0.24
SHKBP1-214ENST00000597396 GAGE12JA6NER3 117 aa13.54□□□□□ -0.24
SHKBP1-214ENST00000597396 NTF3P20783 257 aa13.54□□□□□ -0.24
SHKBP1-214ENST00000597396 RAB4BP61018 213 aa13.54□□□□□ -0.24
SHKBP1-214ENST00000597396 GAGE1Q13065 139 aa13.54□□□□□ -0.24
SHKBP1-214ENST00000597396 GAGE4Q13068 117 aa13.54□□□□□ -0.24
SHKBP1-214ENST00000597396 GAGE5Q13069 117 aa13.54□□□□□ -0.24
SHKBP1-214ENST00000597396 GAGE13Q4V321 117 aa13.54□□□□□ -0.24
SHKBP1-214ENST00000597396 OR10G8Q8NGN5 311 aa13.54□□□□□ -0.24
SHKBP1-214ENST00000597396 Q9H8V8 135 aa13.54□□□□□ -0.24
SHKBP1-214ENST00000597396 MGPP08493 103 aa13.53□□□□□ -0.24
SHKBP1-214ENST00000597396 TWIST1Q15672 202 aa13.53□□□□□ -0.24
SHKBP1-214ENST00000597396 ATP6V0E2Q8NHE4 81 aa13.53□□□□□ -0.24
SHKBP1-214ENST00000597396 TSKUQ8WUA8 353 aa13.53□□□□□ -0.24
SHKBP1-214ENST00000597396 BORCS7Q96B45 105 aa13.53□□□□□ -0.24
SHKBP1-214ENST00000597396 PGLYRP4Q96LB8 373 aa13.53□□□□□ -0.24
SHKBP1-214ENST00000597396 CNFNQ9BYD5 112 aa13.52□□□□□ -0.25
SHKBP1-214ENST00000597396 KIF25-AS1Q9Y6Z4 181 aa13.52□□□□□ -0.25
SHKBP1-214ENST00000597396 V9GYV3 84 aa13.52□□□□□ -0.25
SHKBP1-214ENST00000597396 TRBV10-1A0A0K0K1A3 114 aa13.51□□□□□ -0.25
SHKBP1-214ENST00000597396 GFRA4Q9GZZ7 299 aa13.51□□□□□ -0.25
SHKBP1-214ENST00000597396 NBDYA0A0U1RRE5 68 aa13.5□□□□□ -0.25
SHKBP1-214ENST00000597396 HIGD1CA8MV81 97 aa13.5□□□□□ -0.25
SHKBP1-214ENST00000597396 EVI2AP22794 236 aa13.5□□□□□ -0.25
SHKBP1-214ENST00000597396 RPL36AP83881 106 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-214ENST00000597396 UQCC3Q6UW78 93 aa13.5□□□□□ -0.25
SHKBP1-214ENST00000597396 RPL36ALQ969Q0 106 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-214ENST00000597396 DPH3P1Q9H4G8 78 aa13.5□□□□□ -0.25
SHKBP1-214ENST00000597396 Q9UF83 564 aa13.5□□□□□ -0.25
SHKBP1-214ENST00000597396 FAM231BA6NCW3 169 aa13.49□□□□□ -0.25
SHKBP1-214ENST00000597396 SIVA1O15304 175 aa13.49□□□□□ -0.25
SHKBP1-214ENST00000597396 LINC00694P0DN24 101 aa13.49□□□□□ -0.25
SHKBP1-214ENST00000597396 FOXA3P55318 350 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-214ENST00000597396 TIRAPP58753 221 aa13.49□□□□□ -0.25
SHKBP1-214ENST00000597396 SMIM15Q7Z3B0 74 aa13.49□□□□□ -0.25
SHKBP1-214ENST00000597396 GTSF1LQ9H1H1 148 aa13.49□□□□□ -0.25
SHKBP1-214ENST00000597396 LINC00315P59091 139 aa13.48□□□□□ -0.25
SHKBP1-214ENST00000597396 TTC32Q5I0X7 151 aa13.48□□□□□ -0.25
SHKBP1-214ENST00000597396 Q6ZR54 194 aa13.48□□□□□ -0.25
SHKBP1-214ENST00000597396 COMMD7Q86VX2 200 aa13.47□□□□□ -0.25
SHKBP1-214ENST00000597396 NEXN-AS1Q8NBZ9 246 aa13.47□□□□□ -0.25
SHKBP1-214ENST00000597396 TRBV7-3A0A075B6L6 115 aa13.46□□□□□ -0.25
SHKBP1-214ENST00000597396 TRAV8-6A0A0B4J262 113 aa13.46□□□□□ -0.25
SHKBP1-214ENST00000597396 A0A1B0GUT8 65 aa13.46□□□□□ -0.25
SHKBP1-214ENST00000597396 H7C1H1 209 aa13.46□□□□□ -0.25
SHKBP1-214ENST00000597396 PNRC1Q12796 327 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-214ENST00000597396 OR10J3Q5JRS4 329 aa13.46□□□□□ -0.25
SHKBP1-214ENST00000597396 WFDC10BQ8IUB3 73 aa13.46□□□□□ -0.25
SHKBP1-214ENST00000597396 LELP1Q5T871 98 aa13.45□□□□□ -0.26
SHKBP1-214ENST00000597396 SUMO4Q6EEV6 95 aa13.45□□□□□ -0.26
SHKBP1-214ENST00000597396 NUP35Q8NFH5 326 aa13.45□□□□□ -0.26
SHKBP1-214ENST00000597396 NAT8BQ9UHF3 227 aa13.45□□□□□ -0.26
SHKBP1-214ENST00000597396 UBE2D3P61077 147 aa13.44□□□□□ -0.26
SHKBP1-214ENST00000597396 UBE2D2P62837 147 aa13.44□□□□□ -0.26
SHKBP1-214ENST00000597396 F8W036 122 aa13.43□□□□□ -0.26
SHKBP1-214ENST00000597396 PPP1R2P9O14990 202 aa13.43□□□□□ -0.26
SHKBP1-214ENST00000597396 RIGQ13278 110 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms