RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 NKX6-2Q9C056 277 aaPredicted RBP6.91□□□□□ -1.3
PNKP-208ENST00000596624 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.9□□□□□ -1.3
PNKP-208ENST00000596624 TRAV34A0A0B4J273 112 aa6.9□□□□□ -1.3
PNKP-208ENST00000596624 IGLV2-8P01709 118 aa6.9□□□□□ -1.3
PNKP-208ENST00000596624 ARMS2P0C7Q2 107 aa6.9□□□□□ -1.3
PNKP-208ENST00000596624 Q86TA4 180 aa6.9□□□□□ -1.3
PNKP-208ENST00000596624 OR10G8Q8NGN5 311 aa6.9□□□□□ -1.3
PNKP-208ENST00000596624 CIRBP-AS1Q8TBR5 109 aa6.9□□□□□ -1.3
PNKP-208ENST00000596624 ZFP30Q9Y2G7 519 aa6.9□□□□□ -1.3
PNKP-208ENST00000596624 CTXND1A0A1B0GTU2 59 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 FAM74A7A6NL05 159 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 B4DEV8 164 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 PEX7O00628 323 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 UBE2D3P61077 147 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 UBE2D2P62837 147 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 ELOBQ15370 118 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 ZNF674Q2M3X9 581 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 LINC01559Q495D7 138 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 LINC01620Q4KN68 170 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 Q5BKY6 102 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 SYT8Q8NBV8 401 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 ZC2HC1AQ96GY0 325 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 ALG5Q9Y673 324 aa6.89□□□□□ -1.31
PNKP-208ENST00000596624 RBFOX3A6NFN3 312 aa6.88□□□□□ -1.31
PNKP-208ENST00000596624 H3BVH4 76 aa6.88□□□□□ -1.31
PNKP-208ENST00000596624 FHITP49789 147 aa6.88□□□□□ -1.31
PNKP-208ENST00000596624 Q0VG73 95 aa6.88□□□□□ -1.31
PNKP-208ENST00000596624 PRR27Q6MZM9 219 aa6.88□□□□□ -1.31
PNKP-208ENST00000596624 OR11H4Q8NGC9 324 aa6.88□□□□□ -1.31
PNKP-208ENST00000596624 TCEAL7Q9BRU2 100 aa6.88□□□□□ -1.31
PNKP-208ENST00000596624 KLK12Q9UKR0 248 aa6.88□□□□□ -1.31
PNKP-208ENST00000596624 TRBV7-3A0A075B6L6 115 aa6.87□□□□□ -1.31
PNKP-208ENST00000596624 IGKV2D-24A0A075B6R9 120 aa6.87□□□□□ -1.31
PNKP-208ENST00000596624 SH2D1AO60880 128 aa6.87□□□□□ -1.31
PNKP-208ENST00000596624 LTAP01374 205 aa6.87□□□□□ -1.31
PNKP-208ENST00000596624 FAM162BQ5T6X4 162 aa6.87□□□□□ -1.31
PNKP-208ENST00000596624 RPL7L1Q6DKI1 246 aaKnown RBP6.87□□□□□ -1.31
PNKP-208ENST00000596624 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
PNKP-208ENST00000596624 UBE2WQ96B02 151 aa6.87□□□□□ -1.31
PNKP-208ENST00000596624 URGCP-MRPS24S4R325 110 aa6.87□□□□□ -1.31
PNKP-208ENST00000596624 TRBV6-8A0A0A6YYG3 113 aa6.86□□□□□ -1.31
PNKP-208ENST00000596624 IFNA7P01567 189 aa6.86□□□□□ -1.31
PNKP-208ENST00000596624 CXCL1P09341 107 aa6.86□□□□□ -1.31
PNKP-208ENST00000596624 GIPP09681 153 aaPredicted RBP6.86□□□□□ -1.31
PNKP-208ENST00000596624 RPL36AP83881 106 aaKnown RBP6.86□□□□□ -1.31
PNKP-208ENST00000596624 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
PNKP-208ENST00000596624 RPL36ALQ969Q0 106 aaKnown RBP6.86□□□□□ -1.31
PNKP-208ENST00000596624 FMC1Q96HJ9 113 aa6.86□□□□□ -1.31
PNKP-208ENST00000596624 PHLDA3Q9Y5J5 127 aa6.86□□□□□ -1.31
PNKP-208ENST00000596624 A0A087WWL8 130 aa6.85□□□□□ -1.31
PNKP-208ENST00000596624 A0A087WX48 190 aa6.85□□□□□ -1.31
PNKP-208ENST00000596624 BORCS7-ASMTA0A0B4J1R7 106 aa6.85□□□□□ -1.31
PNKP-208ENST00000596624 GRIFINA4D1Z8 144 aa6.85□□□□□ -1.31
PNKP-208ENST00000596624 TPT1P13693 172 aaKnown RBP6.85□□□□□ -1.31
PNKP-208ENST00000596624 RAB4BP61018 213 aa6.85□□□□□ -1.31
PNKP-208ENST00000596624 DGAT2L7PQ6IED9 249 aa6.85□□□□□ -1.31
PNKP-208ENST00000596624 KRTAP26-1Q6PEX3 210 aa6.85□□□□□ -1.31
PNKP-208ENST00000596624 ZFP82Q8N141 532 aa6.85□□□□□ -1.31
PNKP-208ENST00000596624 SSBP4Q9BWG4 385 aaPredicted RBP6.85□□□□□ -1.31
PNKP-208ENST00000596624 PRR34Q9NV39 138 aa6.85□□□□□ -1.31
PNKP-208ENST00000596624 VAX2Q9UIW0 290 aa6.85□□□□□ -1.31
PNKP-208ENST00000596624 G3V3Q6 166 aa6.84□□□□□ -1.31
PNKP-208ENST00000596624 M0R036 132 aa6.84□□□□□ -1.31
PNKP-208ENST00000596624 SNAI2O43623 268 aa6.84□□□□□ -1.31
PNKP-208ENST00000596624 PTTG1O95997 202 aa6.84□□□□□ -1.31
PNKP-208ENST00000596624 UBE2G2P60604 165 aa6.84□□□□□ -1.31
PNKP-208ENST00000596624 FAM74A4Q5TZK3 123 aa6.84□□□□□ -1.31
PNKP-208ENST00000596624 INO80EQ8NBZ0 244 aaPredicted RBP6.84□□□□□ -1.31
PNKP-208ENST00000596624 NEXN-AS1Q8NBZ9 246 aa6.84□□□□□ -1.31
PNKP-208ENST00000596624 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
PNKP-208ENST00000596624 MED28Q9H204 178 aa6.84□□□□□ -1.31
PNKP-208ENST00000596624 PKIAP61925 76 aa6.83□□□□□ -1.32
PNKP-208ENST00000596624 C9orf163Q8N9P6 203 aa6.83□□□□□ -1.32
PNKP-208ENST00000596624 C1orf43Q9BWL3 253 aa6.83□□□□□ -1.32
PNKP-208ENST00000596624 CYTL1Q9NRR1 136 aa6.83□□□□□ -1.32
PNKP-208ENST00000596624 M0R381 172 aa6.82□□□□□ -1.32
PNKP-208ENST00000596624 OR5AL1P0C617 328 aa6.82□□□□□ -1.32
PNKP-208ENST00000596624 CIRBPQ14011 172 aaKnown RBP6.82□□□□□ -1.32
PNKP-208ENST00000596624 MIAQ16674 131 aa6.82□□□□□ -1.32
PNKP-208ENST00000596624 MPV17L2Q567V2 206 aa6.82□□□□□ -1.32
PNKP-208ENST00000596624 AKR1C8PQ5T2L2 129 aa6.82□□□□□ -1.32
PNKP-208ENST00000596624 NTM-AS1Q6ZSK4 140 aa6.82□□□□□ -1.32
PNKP-208ENST00000596624 DAZAP1Q96EP5 407 aaKnown RBP6.82□□□□□ -1.32
PNKP-208ENST00000596624 KIF25-AS1Q9Y6Z4 181 aa6.82□□□□□ -1.32
PNKP-208ENST00000596624 UBR4Q5T4S7 5183 aa6.81□□□□□ -1.32
PNKP-208ENST00000596624 MAP1LC3B2A6NCE7 125 aa6.81□□□□□ -1.32
PNKP-208ENST00000596624 USP17L23D6RBM5 183 aa6.81□□□□□ -1.32
PNKP-208ENST00000596624 S100A9P06702 114 aaKnown RBP6.81□□□□□ -1.32
PNKP-208ENST00000596624 PRSS1P07477 247 aa6.81□□□□□ -1.32
PNKP-208ENST00000596624 HNRNPA3P51991 378 aaKnown RBP6.81□□□□□ -1.32
PNKP-208ENST00000596624 UBE2G1P62253 170 aa6.81□□□□□ -1.32
PNKP-208ENST00000596624 TMEM97Q5BJF2 176 aa6.81□□□□□ -1.32
PNKP-208ENST00000596624 KCNIP4Q6PIL6 250 aa6.81□□□□□ -1.32
PNKP-208ENST00000596624 SDIM1Q6ZPB5 146 aa6.81□□□□□ -1.32
PNKP-208ENST00000596624 OR10AG1Q8NH19 301 aa6.81□□□□□ -1.32
PNKP-208ENST00000596624 MAP1LC3BQ9GZQ8 125 aa6.81□□□□□ -1.32
PNKP-208ENST00000596624 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
PNKP-208ENST00000596624 RPL19P84098 196 aaKnown RBP6.8□□□□□ -1.32
PNKP-208ENST00000596624 C15orf54Q8N8G6 183 aa6.8□□□□□ -1.32
PNKP-208ENST00000596624 MBD3L1Q8WWY6 194 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms