RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 FAM74A4Q5TZK3 123 aa10.29□□□□□ -0.76
SCN1B-204ENST00000596348 SMIM7Q9BQ49 75 aa10.29□□□□□ -0.76
SCN1B-204ENST00000596348 Q9H8V8 135 aa10.29□□□□□ -0.76
SCN1B-204ENST00000596348 DNAH17Q9UFH2 4485 aa10.29□□□□□ -0.76
SCN1B-204ENST00000596348 FAT2Q9NYQ8 4349 aa10.29□□□□□ -0.76
SCN1B-204ENST00000596348 NBDYA0A0U1RRE5 68 aa10.28□□□□□ -0.76
SCN1B-204ENST00000596348 RHODO00212 210 aa10.28□□□□□ -0.76
SCN1B-204ENST00000596348 C14orf178Q8N769 122 aaPredicted RBP10.28□□□□□ -0.76
SCN1B-204ENST00000596348 FER1L6-AS1Q8NA97 138 aa10.28□□□□□ -0.76
SCN1B-204ENST00000596348 PRADC1Q9BSG0 188 aa10.28□□□□□ -0.76
SCN1B-204ENST00000596348 KRTAP1-5Q9BYS1 174 aa10.28□□□□□ -0.76
SCN1B-204ENST00000596348 SSTP61278 116 aa10.27□□□□□ -0.77
SCN1B-204ENST00000596348 SPANXN1Q5VSR9 72 aa10.27□□□□□ -0.77
SCN1B-204ENST00000596348 TPPP3Q9BW30 176 aa10.27□□□□□ -0.77
SCN1B-204ENST00000596348 RPP21Q9H633 154 aaKnown RBP10.27□□□□□ -0.77
SCN1B-204ENST00000596348 LY96Q9Y6Y9 160 aa10.27□□□□□ -0.77
SCN1B-204ENST00000596348 ZNF727A8MUV8 499 aa10.26□□□□□ -0.77
SCN1B-204ENST00000596348 RTL8CO15255 209 aa10.26□□□□□ -0.77
SCN1B-204ENST00000596348 LINC00694P0DN24 101 aa10.26□□□□□ -0.77
SCN1B-204ENST00000596348 LINC01551Q86U37 167 aa10.26□□□□□ -0.77
SCN1B-204ENST00000596348 MSRB1Q9NZV6 116 aa10.26□□□□□ -0.77
SCN1B-204ENST00000596348 XKRY2A2RUG3 117 aa10.25□□□□□ -0.77
SCN1B-204ENST00000596348 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
SCN1B-204ENST00000596348 GAGE12JA6NER3 117 aa10.24□□□□□ -0.77
SCN1B-204ENST00000596348 CTRLP40313 264 aa10.24□□□□□ -0.77
SCN1B-204ENST00000596348 TIRAPP58753 221 aa10.24□□□□□ -0.77
SCN1B-204ENST00000596348 GAGE1Q13065 139 aa10.24□□□□□ -0.77
SCN1B-204ENST00000596348 GAGE4Q13068 117 aa10.24□□□□□ -0.77
SCN1B-204ENST00000596348 GAGE5Q13069 117 aa10.24□□□□□ -0.77
SCN1B-204ENST00000596348 GAGE13Q4V321 117 aa10.24□□□□□ -0.77
SCN1B-204ENST00000596348 LYZL1Q6UWQ5 148 aa10.24□□□□□ -0.77
SCN1B-204ENST00000596348 FAM231DQ6ZW35 169 aa10.24□□□□□ -0.77
SCN1B-204ENST00000596348 KIF25-AS1Q9Y6Z4 181 aa10.24□□□□□ -0.77
SCN1B-204ENST00000596348 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
SCN1B-204ENST00000596348 A0A1W2PPQ1 181 aa10.23□□□□□ -0.77
SCN1B-204ENST00000596348 SIVA1O15304 175 aa10.23□□□□□ -0.77
SCN1B-204ENST00000596348 LINC00315P59091 139 aa10.23□□□□□ -0.77
SCN1B-204ENST00000596348 IFITM2Q01629 132 aa10.23□□□□□ -0.77
SCN1B-204ENST00000596348 PEA15Q15121 130 aa10.23□□□□□ -0.77
SCN1B-204ENST00000596348 WFDC10BQ8IUB3 73 aa10.23□□□□□ -0.77
SCN1B-204ENST00000596348 GTSF1Q8WW33 167 aa10.23□□□□□ -0.77
SCN1B-204ENST00000596348 AP1S3Q96PC3 154 aa10.23□□□□□ -0.77
SCN1B-204ENST00000596348 F2Z2F3 143 aa10.22□□□□□ -0.77
SCN1B-204ENST00000596348 GATCO43716 136 aaKnown RBP10.22□□□□□ -0.77
SCN1B-204ENST00000596348 CACNG7P62955 275 aa10.22□□□□□ -0.77
SCN1B-204ENST00000596348 C1orf134Q5TEV5 83 aa10.22□□□□□ -0.77
SCN1B-204ENST00000596348 ATP6V0E2Q8NHE4 81 aa10.22□□□□□ -0.77
SCN1B-204ENST00000596348 ERVFC1-1P60608 527 aa10.21□□□□□ -0.77
SCN1B-204ENST00000596348 RAB4BP61018 213 aa10.21□□□□□ -0.77
SCN1B-204ENST00000596348 ZNF56Q15929 161 aa10.21□□□□□ -0.77
SCN1B-204ENST00000596348 TMEM241Q24JQ0 296 aa10.21□□□□□ -0.77
SCN1B-204ENST00000596348 FAM74A3Q4VXF1 159 aa10.21□□□□□ -0.77
SCN1B-204ENST00000596348 TTC32Q5I0X7 151 aa10.21□□□□□ -0.77
SCN1B-204ENST00000596348 CNFNQ9BYD5 112 aa10.21□□□□□ -0.77
SCN1B-204ENST00000596348 GTSF1LQ9H1H1 148 aa10.21□□□□□ -0.77
SCN1B-204ENST00000596348 SMDT1Q9H4I9 107 aa10.21□□□□□ -0.77
SCN1B-204ENST00000596348 NTF3P20783 257 aa10.2□□□□□ -0.78
SCN1B-204ENST00000596348 EVI2AP22794 236 aa10.2□□□□□ -0.78
SCN1B-204ENST00000596348 RAB14P61106 215 aa10.2□□□□□ -0.78
SCN1B-204ENST00000596348 RPL23P62829 140 aaKnown RBP10.2□□□□□ -0.78
SCN1B-204ENST00000596348 CT83Q5H943 113 aa10.2□□□□□ -0.78
SCN1B-204ENST00000596348 ISOC2Q96AB3 205 aa10.2□□□□□ -0.78
SCN1B-204ENST00000596348 BIRC6Q9NR09 4857 aa10.2□□□□□ -0.78
SCN1B-204ENST00000596348 OSTCQ9NRP0 149 aa10.2□□□□□ -0.78
SCN1B-204ENST00000596348 TRBV10-1A0A0K0K1A3 114 aa10.19□□□□□ -0.78
SCN1B-204ENST00000596348 A8MWL6 223 aa10.19□□□□□ -0.78
SCN1B-204ENST00000596348 WDR73Q6P4I2 378 aa10.19□□□□□ -0.78
SCN1B-204ENST00000596348 LINC00336Q6ZUF6 198 aa10.19□□□□□ -0.78
SCN1B-204ENST00000596348 C6orf223Q8N319 242 aa10.19□□□□□ -0.78
SCN1B-204ENST00000596348 NAT8Q9UHE5 227 aa10.19□□□□□ -0.78
SCN1B-204ENST00000596348 PKHD1P08F94 4074 aa10.18□□□□□ -0.78
SCN1B-204ENST00000596348 F5H697 171 aa10.18□□□□□ -0.78
SCN1B-204ENST00000596348 DNAH10OSP0CZ25 163 aa10.18□□□□□ -0.78
SCN1B-204ENST00000596348 SMIM17P0DL12 118 aa10.18□□□□□ -0.78
SCN1B-204ENST00000596348 ADIRFQ15847 76 aa10.18□□□□□ -0.78
SCN1B-204ENST00000596348 SOHLH1Q5JUK2 328 aa10.18□□□□□ -0.78
SCN1B-204ENST00000596348 CLLU1Q5K131 121 aa10.18□□□□□ -0.78
SCN1B-204ENST00000596348 LELP1Q5T871 98 aa10.18□□□□□ -0.78
SCN1B-204ENST00000596348 NEXN-AS1Q8NBZ9 246 aa10.18□□□□□ -0.78
SCN1B-204ENST00000596348 OR10G8Q8NGN5 311 aa10.18□□□□□ -0.78
SCN1B-204ENST00000596348 V9GYV3 84 aa10.18□□□□□ -0.78
SCN1B-204ENST00000596348 PKD1P98161 4303 aa10.17□□□□□ -0.78
SCN1B-204ENST00000596348 PRSS29PA6NIE9 313 aa10.17□□□□□ -0.78
SCN1B-204ENST00000596348 MGPP08493 103 aa10.17□□□□□ -0.78
SCN1B-204ENST00000596348 TRGC1P0CF51 173 aa10.17□□□□□ -0.78
SCN1B-204ENST00000596348 UBE2D3P61077 147 aa10.17□□□□□ -0.78
SCN1B-204ENST00000596348 UBE2D2P62837 147 aa10.17□□□□□ -0.78
SCN1B-204ENST00000596348 RPL36AP83881 106 aaKnown RBP10.17□□□□□ -0.78
SCN1B-204ENST00000596348 TWIST1Q15672 202 aa10.17□□□□□ -0.78
SCN1B-204ENST00000596348 RPL36ALQ969Q0 106 aaKnown RBP10.17□□□□□ -0.78
SCN1B-204ENST00000596348 PGLYRP4Q96LB8 373 aa10.17□□□□□ -0.78
SCN1B-204ENST00000596348 TRBV7-3A0A075B6L6 115 aa10.16□□□□□ -0.78
SCN1B-204ENST00000596348 A0A1B0GVY2 172 aa10.16□□□□□ -0.78
SCN1B-204ENST00000596348 FOXA3P55318 350 aaPredicted RBP10.16□□□□□ -0.78
SCN1B-204ENST00000596348 OR10J3Q5JRS4 329 aa10.16□□□□□ -0.78
SCN1B-204ENST00000596348 SUMO4Q6EEV6 95 aa10.16□□□□□ -0.78
SCN1B-204ENST00000596348 TSKUQ8WUA8 353 aa10.16□□□□□ -0.78
SCN1B-204ENST00000596348 TRAV8-6A0A0B4J262 113 aa10.15□□□□□ -0.78
SCN1B-204ENST00000596348 IGHV3-38A0A0C4DH36 116 aa10.15□□□□□ -0.78
SCN1B-204ENST00000596348 HIGD1CA8MV81 97 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms