RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TPPP3Q9BW30 176 aa9.25□□□□□ -0.93
SCAF1-202ENST00000595242 SAMD10Q9BYL1 202 aa9.25□□□□□ -0.93
SCAF1-202ENST00000595242 NTF3P20783 257 aa9.24□□□□□ -0.93
SCAF1-202ENST00000595242 LEPP41159 167 aa9.24□□□□□ -0.93
SCAF1-202ENST00000595242 AMTP48728 403 aa9.24□□□□□ -0.93
SCAF1-202ENST00000595242 DEFB1P60022 68 aa9.24□□□□□ -0.93
SCAF1-202ENST00000595242 NIT1Q86X76 327 aa9.24□□□□□ -0.93
SCAF1-202ENST00000595242 C11orf68Q9H3H3 251 aaKnown RBP9.24□□□□□ -0.93
SCAF1-202ENST00000595242 MAP6D1Q9H9H5 199 aa9.24□□□□□ -0.93
SCAF1-202ENST00000595242 DUSP14O95147 198 aaKnown RBP9.23□□□□□ -0.93
SCAF1-202ENST00000595242 ZNF688P0C7X2 276 aa9.23□□□□□ -0.93
SCAF1-202ENST00000595242 PMCHP20382 165 aa9.23□□□□□ -0.93
SCAF1-202ENST00000595242 PSMG4Q5JS54 123 aa9.23□□□□□ -0.93
SCAF1-202ENST00000595242 FOXI2Q6ZQN5 318 aa9.23□□□□□ -0.93
SCAF1-202ENST00000595242 Q8N1X5 172 aa9.23□□□□□ -0.93
SCAF1-202ENST00000595242 GSN-AS1Q9NRJ2 163 aa9.23□□□□□ -0.93
SCAF1-202ENST00000595242 LRP1BQ9NZR2 4599 aa9.22□□□□□ -0.93
SCAF1-202ENST00000595242 TRAV25A0A0B4J276 109 aa9.22□□□□□ -0.93
SCAF1-202ENST00000595242 DEFB4AO15263 64 aa9.22□□□□□ -0.93
SCAF1-202ENST00000595242 HSBP1O75506 76 aa9.22□□□□□ -0.93
SCAF1-202ENST00000595242 PPBPP02775 128 aa9.22□□□□□ -0.93
SCAF1-202ENST00000595242 RAB4AP20338 218 aa9.22□□□□□ -0.93
SCAF1-202ENST00000595242 TWIST1Q15672 202 aa9.22□□□□□ -0.93
SCAF1-202ENST00000595242 MRPL51Q4U2R6 128 aaKnown RBP9.22□□□□□ -0.93
SCAF1-202ENST00000595242 AMN1Q8IY45 258 aa9.22□□□□□ -0.93
SCAF1-202ENST00000595242 RNF185Q96GF1 192 aa9.22□□□□□ -0.93
SCAF1-202ENST00000595242 SCRT2Q9NQ03 307 aa9.22□□□□□ -0.93
SCAF1-202ENST00000595242 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
SCAF1-202ENST00000595242 APOBP04114 4563 aaKnown RBP9.21□□□□□ -0.93
SCAF1-202ENST00000595242 NXPH4O95158 308 aa9.21□□□□□ -0.94
SCAF1-202ENST00000595242 TDRG1Q3Y452 100 aa9.21□□□□□ -0.94
SCAF1-202ENST00000595242 ANXA2RQ3ZCQ2 193 aa9.21□□□□□ -0.94
SCAF1-202ENST00000595242 EBLN2Q6P2I7 272 aa9.21□□□□□ -0.94
SCAF1-202ENST00000595242 RNASEKQ6P5S7 137 aaKnown RBP9.21□□□□□ -0.94
SCAF1-202ENST00000595242 Q6ZQT7 251 aa9.21□□□□□ -0.94
SCAF1-202ENST00000595242 ORMDL3Q8N138 153 aa9.21□□□□□ -0.94
SCAF1-202ENST00000595242 POM121L12Q8N7R1 296 aa9.21□□□□□ -0.94
SCAF1-202ENST00000595242 OR11H2Q8NH07 326 aa9.21□□□□□ -0.94
SCAF1-202ENST00000595242 OR10AG1Q8NH19 301 aa9.21□□□□□ -0.94
SCAF1-202ENST00000595242 NAGKQ9UJ70 344 aa9.21□□□□□ -0.94
SCAF1-202ENST00000595242 C7orf71A4D174 169 aa9.2□□□□□ -0.94
SCAF1-202ENST00000595242 D6R8Y8 96 aa9.2□□□□□ -0.94
SCAF1-202ENST00000595242 LINC00614P0C842 121 aa9.2□□□□□ -0.94
SCAF1-202ENST00000595242 TSPOP30536 169 aa9.2□□□□□ -0.94
SCAF1-202ENST00000595242 ASIPP42127 132 aa9.2□□□□□ -0.94
SCAF1-202ENST00000595242 TFPI2P48307 235 aa9.2□□□□□ -0.94
SCAF1-202ENST00000595242 LGALS9BQ3B8N2 356 aa9.2□□□□□ -0.94
SCAF1-202ENST00000595242 AMTNQ6UX39 209 aa9.2□□□□□ -0.94
SCAF1-202ENST00000595242 PRELID3AQ96N28 172 aa9.2□□□□□ -0.94
SCAF1-202ENST00000595242 SPAG8Q99932 426 aaPredicted RBP9.2□□□□□ -0.94
SCAF1-202ENST00000595242 MSRB1Q9NZV6 116 aa9.2□□□□□ -0.94
SCAF1-202ENST00000595242 PCP4L1A6NKN8 68 aa9.19□□□□□ -0.94
SCAF1-202ENST00000595242 C16orf90A8MZG2 172 aa9.19□□□□□ -0.94
SCAF1-202ENST00000595242 H3BVH4 76 aa9.19□□□□□ -0.94
SCAF1-202ENST00000595242 RNASE4P34096 147 aaKnown RBP9.19□□□□□ -0.94
SCAF1-202ENST00000595242 KIR3DS1Q14943 382 aa9.19□□□□□ -0.94
SCAF1-202ENST00000595242 ODF3L2Q3SX64 289 aa9.19□□□□□ -0.94
SCAF1-202ENST00000595242 TEX43Q6ZNM6 134 aa9.19□□□□□ -0.94
SCAF1-202ENST00000595242 FAM19A2Q8N3H0 131 aa9.19□□□□□ -0.94
SCAF1-202ENST00000595242 Q8N976 141 aa9.19□□□□□ -0.94
SCAF1-202ENST00000595242 CSTL1Q9H114 145 aa9.19□□□□□ -0.94
SCAF1-202ENST00000595242 IGHV1-24A0A0C4DH33 117 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 MUC21A0A0G2JKD1 596 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 LINC01546A6NGU7 62 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 PRSS47A8MTI9 375 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 M0R2Z0 102 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 P0DMU3 169 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 FAM231AP0DMU4 169 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 FAM231CP0DMU5 169 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 RNASE3P12724 160 aaKnown RBP9.18□□□□□ -0.94
SCAF1-202ENST00000595242 HLA-DRB4P13762 266 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 CDKN1BP46527 198 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 PKIAP61925 76 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 MUC21Q5SSG8 566 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 CLUHP3Q96NS8 147 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 HLA-DRB4X5D2U9 266 aa9.18□□□□□ -0.94
SCAF1-202ENST00000595242 OR4C46A6NHA9 309 aa9.17□□□□□ -0.94
SCAF1-202ENST00000595242 J3KRW8 73 aa9.17□□□□□ -0.94
SCAF1-202ENST00000595242 SCGB1D1O95968 90 aa9.17□□□□□ -0.94
SCAF1-202ENST00000595242 C3orf79P0CE67 100 aa9.17□□□□□ -0.94
SCAF1-202ENST00000595242 CKS2P33552 79 aa9.17□□□□□ -0.94
SCAF1-202ENST00000595242 SPANXN1Q5VSR9 72 aa9.17□□□□□ -0.94
SCAF1-202ENST00000595242 SMIM15Q7Z3B0 74 aa9.17□□□□□ -0.94
SCAF1-202ENST00000595242 UBR4Q5T4S7 5183 aa9.16□□□□□ -0.94
SCAF1-202ENST00000595242 NACAE9PAV3 2078 aa9.16□□□□□ -0.94
SCAF1-202ENST00000595242 NPYP01303 97 aa9.16□□□□□ -0.94
SCAF1-202ENST00000595242 FAM159AQ6UWV7 190 aa9.16□□□□□ -0.94
SCAF1-202ENST00000595242 AP5S1Q9NUS5 200 aa9.16□□□□□ -0.94
SCAF1-202ENST00000595242 TRAV10A0A0B4J240 114 aa9.15□□□□□ -0.94
SCAF1-202ENST00000595242 TSTD3H0UI37 97 aa9.15□□□□□ -0.94
SCAF1-202ENST00000595242 H3BMM0 161 aa9.15□□□□□ -0.94
SCAF1-202ENST00000595242 CRXO43186 299 aaPredicted RBP9.15□□□□□ -0.94
SCAF1-202ENST00000595242 EVI2AP22794 236 aa9.15□□□□□ -0.94
SCAF1-202ENST00000595242 S100A4P26447 101 aaKnown RBP9.15□□□□□ -0.94
SCAF1-202ENST00000595242 DEFB131AP59861 70 aa9.15□□□□□ -0.94
SCAF1-202ENST00000595242 KRTDAPP60985 99 aa9.15□□□□□ -0.94
SCAF1-202ENST00000595242 Q6ZR54 194 aa9.15□□□□□ -0.94
SCAF1-202ENST00000595242 Q6ZTC4 211 aa9.15□□□□□ -0.94
SCAF1-202ENST00000595242 FA2HQ7L5A8 372 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms