RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 HOXB6P17509 224 aaKnown RBP1.5□□□□□ -2.17
VRK3-204ENST00000593912 ZNF80P51504 273 aaPredicted RBP1.5□□□□□ -2.17
VRK3-204ENST00000593912 UCP3P55916 312 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 RRAS2P62070 204 aaPredicted RBP1.5□□□□□ -2.17
VRK3-204ENST00000593912 IQCJQ1A5X6 159 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 C10orf113Q5VZT2 155 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 PRSS48Q7RTY5 328 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 S100A7AQ86SG5 101 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 OR5A1Q8NGJ0 315 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 OR10G8Q8NGN5 311 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 OR5H6Q8NGV6 325 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 MITD1Q8WV92 249 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 ISOC2Q96AB3 205 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 RHBDL2Q9NX52 303 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 MGAT4CQ9UBM8 478 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 ORC6Q9Y5N6 252 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 LOC100130705A0A1B0GUX0 176 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 IRGMA1A4Y4 181 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 CCL25O15444 150 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 BCL2L11O43521 198 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 CDS2O95674 445 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 SPINK1P00995 79 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 RAB3BP20337 219 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 RCVRNP35243 200 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 RANBP1P43487 201 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 TAS2R46P59540 309 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 RPL37P61927 97 aaKnown RBP1.49□□□□□ -2.17
VRK3-204ENST00000593912 SELENOTP62341 195 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 AHSA2Q719I0 299 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 KRTAP13-1Q8IUC0 172 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 LYSMD2Q8IV50 215 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 FAM19A2Q8N3H0 131 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 TMEM252Q8N6L7 170 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 GLYATL2Q8WU03 294 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 PHYHIPLQ96FC7 376 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 GPN1Q9HCN4 374 aaPredicted RBP1.49□□□□□ -2.17
VRK3-204ENST00000593912 ANAPC10Q9UM13 185 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 PSG8Q9UQ74 426 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 RNF24Q9Y225 148 aa1.49□□□□□ -2.17
VRK3-204ENST00000593912 LSM2Q9Y333 95 aaKnown RBP1.49□□□□□ -2.17
VRK3-204ENST00000593912 C20orf202A1L168 122 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 H3BVH4 76 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 M0R036 132 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 WRBO00258 174 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 GOSR2O14653 212 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 PDCD5O14737 125 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 SCGNO76038 276 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 MBPP02686 304 aaPredicted RBP1.48□□□□□ -2.17
VRK3-204ENST00000593912 S100A4P26447 101 aaKnown RBP1.48□□□□□ -2.17
VRK3-204ENST00000593912 ATP5IP56385 69 aaPredicted RBP1.48□□□□□ -2.17
VRK3-204ENST00000593912 KRTAP10-5P60370 271 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 PDE6HQ13956 83 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 SMCO1Q147U7 214 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 ZNF56Q15929 161 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 SPANXN5Q5MJ07 72 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 C9orf129Q5T035 196 aaKnown RBP1.48□□□□□ -2.17
VRK3-204ENST00000593912 C10orf25Q5T742 122 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 PXDC1Q5TGL8 231 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 OR2D3Q8NGH3 330 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 SFRP2Q96HF1 295 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 SGK494Q96LW2 274 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 TMEM243Q9BU79 118 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 MND1Q9BWT6 205 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 TREM1Q9NP99 234 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 COPZ2Q9P299 210 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 POMPQ9Y244 141 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 CHTOPQ9Y3Y2 248 aaKnown RBP1.48□□□□□ -2.17
VRK3-204ENST00000593912 LENEPQ9Y5L5 61 aa1.48□□□□□ -2.17
VRK3-204ENST00000593912 LOC100506127A0A0U1RQW1 187 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 RPL37AP8A6NKH3 93 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 M0R381 172 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 SLC25A20O43772 301 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 NOL3O60936 208 aaKnown RBP1.47□□□□□ -2.17
VRK3-204ENST00000593912 IGLV6-57P01721 117 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 TBPP20226 339 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 CSN1S1P47710 185 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 MT4P47944 62 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 UBE2AP49459 152 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 SPHARQ15513 63 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 TMEM97Q5BJF2 176 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 MIC13Q5XKP0 118 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 LYZL2Q7Z4W2 148 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.47□□□□□ -2.17
VRK3-204ENST00000593912 ZNF486Q96H40 463 aaPredicted RBP1.47□□□□□ -2.17
VRK3-204ENST00000593912 PGLYRP4Q96LB8 373 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 C2orf48Q96LS8 159 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 MGST2Q99735 147 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 SLIRPQ9GZT3 109 aaKnown RBP1.47□□□□□ -2.17
VRK3-204ENST00000593912 FAM107BQ9H098 131 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 SMDT1Q9H4I9 107 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 TP73-AS1Q9UF72 201 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 FLVCR2Q9UPI3 526 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 C22orf24Q9Y442 160 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 AP4S1Q9Y587 144 aa1.47□□□□□ -2.17
VRK3-204ENST00000593912 TRAV1-2A0A0B4J238 106 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 IGKV3D-20A0A0C4DH25 116 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 LINC00959A0A1B0GUT2 108 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 UBE2L6O14933 153 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 GCGP01275 180 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 NBEAP1P0C6P0 100 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms