RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-242	ENST00000593093	RASL10A	Q92737	203 aa		10.88	□□□□□ -0.67
CIRBP-242	ENST00000593093	CRLF1	O75462	422 aa		10.88	□□□□□ -0.67
CIRBP-242	ENST00000593093	OR11H6	Q8NGC7	330 aa		10.88	□□□□□ -0.67
CIRBP-242	ENST00000593093	DPH3P1	Q9H4G8	78 aa		10.88	□□□□□ -0.67
CIRBP-242	ENST00000593093	LY6L	H3BQJ8	138 aa		10.87	□□□□□ -0.67
CIRBP-242	ENST00000593093	PIFO	Q8TCI5	191 aa		10.87	□□□□□ -0.67
CIRBP-242	ENST00000593093	CARD19	Q96LW7	228 aa		10.87	□□□□□ -0.67
CIRBP-242	ENST00000593093	NBL1	P41271	181 aa		10.87	□□□□□ -0.67
CIRBP-242	ENST00000593093	LINC00477	Q96M19	166 aa		10.87	□□□□□ -0.67
CIRBP-242	ENST00000593093	MSRB2	Q9Y3D2	182 aa		10.87	□□□□□ -0.67
CIRBP-242	ENST00000593093	IGFL3	Q6UXB1	125 aa		10.86	□□□□□ -0.67
CIRBP-242	ENST00000593093	TEN1	Q86WV5	123 aa		10.86	□□□□□ -0.67
CIRBP-242	ENST00000593093	NEXN-AS1	Q8NBZ9	246 aa		10.86	□□□□□ -0.67
CIRBP-242	ENST00000593093	NTN5	Q8WTR8	489 aa	Predicted RBP	10.86	□□□□□ -0.67
CIRBP-242	ENST00000593093	MYO18B	Q8IUG5	2567 aa		10.86	□□□□□ -0.67
CIRBP-242	ENST00000593093	CRIP2	P52943	208 aa	Predicted RBP	10.85	□□□□□ -0.67
CIRBP-242	ENST00000593093	LY6E	Q16553	131 aa		10.85	□□□□□ -0.67
CIRBP-242	ENST00000593093		Q8NA96	180 aa		10.85	□□□□□ -0.67
CIRBP-242	ENST00000593093	SETD2	Q9BYW2	2564 aa	Predicted RBP	10.85	□□□□□ -0.67
CIRBP-242	ENST00000593093	CCL21	O00585	134 aa		10.85	□□□□□ -0.67
CIRBP-242	ENST00000593093	NDUFA11	Q86Y39	141 aa		10.85	□□□□□ -0.67
CIRBP-242	ENST00000593093	TMEM262	E9PQX1	116 aa		10.85	□□□□□ -0.67
CIRBP-242	ENST00000593093	SLC25A20	O43772	301 aa		10.85	□□□□□ -0.67
CIRBP-242	ENST00000593093	ZNF56	Q15929	161 aa		10.85	□□□□□ -0.67
CIRBP-242	ENST00000593093	EEF1AKMT3	Q96AZ1	226 aa		10.85	□□□□□ -0.67
CIRBP-242	ENST00000593093	CNFN	Q9BYD5	112 aa		10.85	□□□□□ -0.67
CIRBP-242	ENST00000593093	NPB	Q8NG41	125 aa		10.84	□□□□□ -0.67
CIRBP-242	ENST00000593093	TOMM6	Q96B49	74 aa		10.84	□□□□□ -0.67
CIRBP-242	ENST00000593093	TRAV21	A0A0B4J279	112 aa		10.84	□□□□□ -0.67
CIRBP-242	ENST00000593093	CD7	P09564	240 aa		10.84	□□□□□ -0.67
CIRBP-242	ENST00000593093	CHCHD5	Q9BSY4	110 aa		10.84	□□□□□ -0.67
CIRBP-242	ENST00000593093		A4D1N5	150 aa		10.84	□□□□□ -0.67
CIRBP-242	ENST00000593093	C20orf173	Q96LM9	149 aa		10.84	□□□□□ -0.67
CIRBP-242	ENST00000593093	VCX2	Q9H322	139 aa		10.84	□□□□□ -0.67
CIRBP-242	ENST00000593093	PRO1854	Q9UHT4	67 aa		10.84	□□□□□ -0.67
CIRBP-242	ENST00000593093	RHOD	O00212	210 aa		10.83	□□□□□ -0.68
CIRBP-242	ENST00000593093	RNASE13	Q5GAN3	156 aa	Known RBP	10.83	□□□□□ -0.68
CIRBP-242	ENST00000593093	SPX	Q9BT56	116 aa		10.83	□□□□□ -0.68
CIRBP-242	ENST00000593093	IGHV3-73	A0A0B4J1V6	119 aa		10.83	□□□□□ -0.68
CIRBP-242	ENST00000593093	TRAV12-3	A0A0B4J271	114 aa		10.83	□□□□□ -0.68
CIRBP-242	ENST00000593093		A0A0U1RRA0	63 aa		10.83	□□□□□ -0.68
CIRBP-242	ENST00000593093	CFC1B	P0CG36	223 aa		10.83	□□□□□ -0.68
CIRBP-242	ENST00000593093	CFC1	P0CG37	223 aa		10.83	□□□□□ -0.68
CIRBP-242	ENST00000593093	C5orf47	Q569G3	176 aa		10.83	□□□□□ -0.68
CIRBP-242	ENST00000593093	CSDC2	Q9Y534	153 aa	Known RBP	10.83	□□□□□ -0.68
CIRBP-242	ENST00000593093	TRBV12-3	P01733	135 aa		10.82	□□□□□ -0.68
CIRBP-242	ENST00000593093		Q8N9W7	124 aa		10.82	□□□□□ -0.68
CIRBP-242	ENST00000593093	CCDC140	Q96MF4	163 aa		10.82	□□□□□ -0.68
CIRBP-242	ENST00000593093	USP9Y	O00507	2555 aa	Predicted RBP	10.82	□□□□□ -0.68
CIRBP-242	ENST00000593093	C15orf53	Q8NAA6	179 aa		10.82	□□□□□ -0.68
CIRBP-242	ENST00000593093	PKD1L2	Q7Z442	2459 aa		10.82	□□□□□ -0.68
CIRBP-242	ENST00000593093	MYO9A	B2RTY4	2548 aa		10.82	□□□□□ -0.68
CIRBP-242	ENST00000593093	TRAV12-1	A0A0B4J245	112 aa		10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093		A0A0J9YY99	117 aa		10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093	LINC00694	P0DN24	101 aa		10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093	UNQ9165/PRO28630	Q6UXU0	137 aa		10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093	ZFAND3	Q9H8U3	227 aa		10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093	WNK1	Q9H4A3	2382 aa		10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093	TSPEAR-AS2	P59090	65 aa		10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093	SDHAF1	A6NFY7	115 aa		10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093		J3QQQ9	107 aa		10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093	ZFP36	P26651	326 aa	Known RBP	10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093	SAA4	P35542	130 aa		10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093	LY6D	Q14210	128 aa		10.81	□□□□□ -0.68
CIRBP-242	ENST00000593093	C10orf126	Q8N4M7	172 aa		10.8	□□□□□ -0.68
CIRBP-242	ENST00000593093	TRAV12-2	A0A075B6T6	113 aa		10.8	□□□□□ -0.68
CIRBP-242	ENST00000593093	CLPSL1	A2RUU4	121 aa		10.8	□□□□□ -0.68
CIRBP-242	ENST00000593093	PMVK	Q15126	192 aa		10.8	□□□□□ -0.68
CIRBP-242	ENST00000593093	BRD3OS	Q6XYD6	125 aa		10.8	□□□□□ -0.68
CIRBP-242	ENST00000593093	PTPN13	Q12923	2485 aa		10.79	□□□□□ -0.68
CIRBP-242	ENST00000593093	TEX49	A0A1B0GTD5	131 aa		10.79	□□□□□ -0.68
CIRBP-242	ENST00000593093	MUSTN1	Q8IVN3	82 aa		10.79	□□□□□ -0.68
CIRBP-242	ENST00000593093	FAM110D	Q8TAY7	271 aa	Predicted RBP	10.79	□□□□□ -0.68
CIRBP-242	ENST00000593093	CUBN	O60494	3623 aa		10.78	□□□□□ -0.68
CIRBP-242	ENST00000593093	IGF2-AS	Q6U949	168 aa		10.78	□□□□□ -0.68
CIRBP-242	ENST00000593093	COX8C	Q7Z4L0	72 aa		10.78	□□□□□ -0.68
CIRBP-242	ENST00000593093	ZNF580	Q9UK33	172 aa		10.78	□□□□□ -0.68
CIRBP-242	ENST00000593093	ATP6V0E2	Q8NHE4	81 aa		10.78	□□□□□ -0.68
CIRBP-242	ENST00000593093	EDA2R	Q9HAV5	297 aa		10.78	□□□□□ -0.68
CIRBP-242	ENST00000593093	POLQ	O75417	2590 aa		10.78	□□□□□ -0.68
CIRBP-242	ENST00000593093	UBE2D1	P51668	147 aa		10.78	□□□□□ -0.68
CIRBP-242	ENST00000593093	CELSR1	Q9NYQ6	3014 aa		10.77	□□□□□ -0.68
CIRBP-242	ENST00000593093	RBAKDN	A6NC62	111 aa		10.77	□□□□□ -0.69
CIRBP-242	ENST00000593093		K7ENP7	123 aa		10.77	□□□□□ -0.69
CIRBP-242	ENST00000593093	KLK5	Q9Y337	293 aa	Predicted RBP	10.77	□□□□□ -0.69
CIRBP-242	ENST00000593093	C9orf153	Q5TBE3	101 aa		10.77	□□□□□ -0.69
CIRBP-242	ENST00000593093		A0A0J9YXV3	536 aa		10.76	□□□□□ -0.69
CIRBP-242	ENST00000593093	C9orf47	Q6ZRZ4	202 aa		10.76	□□□□□ -0.69
CIRBP-242	ENST00000593093	TMEM190	Q8WZ59	177 aa		10.76	□□□□□ -0.69
CIRBP-242	ENST00000593093	TRAV8-4	A0A0B4J246	113 aa		10.76	□□□□□ -0.69
CIRBP-242	ENST00000593093	SUMO4	Q6EEV6	95 aa		10.76	□□□□□ -0.69
CIRBP-242	ENST00000593093	ZNRF2	Q8NHG8	242 aa		10.76	□□□□□ -0.69
CIRBP-242	ENST00000593093	KLK9	Q9UKQ9	250 aa		10.76	□□□□□ -0.69
CIRBP-242	ENST00000593093	OOSP1	A8MZH6	123 aa		10.76	□□□□□ -0.69
CIRBP-242	ENST00000593093	CRYGD	P07320	174 aa		10.76	□□□□□ -0.69
CIRBP-242	ENST00000593093	SRSF2	Q01130	221 aa	Known RBP	10.76	□□□□□ -0.69
CIRBP-242	ENST00000593093	ZFAND2A	Q8N6M9	145 aa		10.76	□□□□□ -0.69
CIRBP-242	ENST00000593093	SMIM9	A6NGZ8	99 aa		10.75	□□□□□ -0.69
CIRBP-242	ENST00000593093	VCY	O14598	125 aa		10.75	□□□□□ -0.69
CIRBP-242	ENST00000593093	C9orf139	Q6ZV77	190 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms