RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 LOC100131303A0A0U1RQF7 123 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 P0DMU3 169 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 FAM231AP0DMU4 169 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 FAM231CP0DMU5 169 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 EVI2AP22794 236 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 SLAQ13239 276 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 TWIST1Q15672 202 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 LGALS9BQ3B8N2 356 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 SPANXN1Q5VSR9 72 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 UFSP1Q6NVU6 142 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 TMEM88Q6PEY1 159 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 ZFP82Q8N141 532 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 SVBPQ8N300 66 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 C14orf178Q8N769 122 aaPredicted RBP6.77□□□□□ -1.33
DDX39A-220ENST00000593008 FAM210BQ96KR6 192 aa6.77□□□□□ -1.33
DDX39A-220ENST00000593008 DEFB131BA0A096LNP1 70 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 A0A0J9YY99 117 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 A0A1W2PPQ1 181 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 F5H768 121 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 GAS8-AS1O95177 125 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 CRYGDP07320 174 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 NTF3P20783 257 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 LINC00315P59091 139 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 FHL2Q14192 279 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 RHEBQ15382 184 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 OR4C5Q8NGB2 326 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 ANAPC16Q96DE5 110 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 CNFNQ9BYD5 112 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 GFRA4Q9GZZ7 299 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 NAT8BQ9UHF3 227 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 KIF25-AS1Q9Y6Z4 181 aa6.76□□□□□ -1.33
DDX39A-220ENST00000593008 IGHV4-4A0A075B6R2 117 aa6.75□□□□□ -1.33
DDX39A-220ENST00000593008 TGIF2-C20orf24A0A0A6YYL0 155 aa6.75□□□□□ -1.33
DDX39A-220ENST00000593008 TRAV26-2A0A0B4J265 109 aa6.75□□□□□ -1.33
DDX39A-220ENST00000593008 TRAV4A0A0B4J268 109 aa6.75□□□□□ -1.33
DDX39A-220ENST00000593008 A0A1B0GXF2 115 aa6.75□□□□□ -1.33
DDX39A-220ENST00000593008 PPP1R2P9O14990 202 aa6.75□□□□□ -1.33
DDX39A-220ENST00000593008 SNAPINO95295 136 aa6.75□□□□□ -1.33
DDX39A-220ENST00000593008 MGPP08493 103 aa6.75□□□□□ -1.33
DDX39A-220ENST00000593008 CAMPP49913 170 aa6.75□□□□□ -1.33
DDX39A-220ENST00000593008 SYT8Q8NBV8 401 aa6.75□□□□□ -1.33
DDX39A-220ENST00000593008 APLNQ9ULZ1 77 aa6.75□□□□□ -1.33
DDX39A-220ENST00000593008 TRAV26-1A0A087WT03 109 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 A0A087WWC5 75 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 A0A1B0GUT8 65 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 SMKR1H3BMG3 65 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 ATP5G1P05496 136 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 CACNG7P62955 275 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 PIK3CD-AS1Q5SR53 167 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 PTH2Q96A98 100 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 VSIG2Q96IQ7 327 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 YPEL4Q96NS1 127 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 AP1S3Q96PC3 154 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 CTDSP1Q9GZU7 261 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 DNAH6Q9C0G6 4158 aa6.74□□□□□ -1.33
DDX39A-220ENST00000593008 F2Z2F3 143 aa6.73□□□□□ -1.33
DDX39A-220ENST00000593008 NCR2O95944 276 aa6.73□□□□□ -1.33
DDX39A-220ENST00000593008 GATA1P15976 413 aaPredicted RBP6.73□□□□□ -1.33
DDX39A-220ENST00000593008 ZNF56Q15929 161 aa6.73□□□□□ -1.33
DDX39A-220ENST00000593008 LGALS9CQ6DKI2 356 aa6.73□□□□□ -1.33
DDX39A-220ENST00000593008 SUMO4Q6EEV6 95 aa6.73□□□□□ -1.33
DDX39A-220ENST00000593008 AMN1Q8IY45 258 aa6.73□□□□□ -1.33
DDX39A-220ENST00000593008 RNF185Q96GF1 192 aa6.73□□□□□ -1.33
DDX39A-220ENST00000593008 C18orf15Q96N68 181 aa6.73□□□□□ -1.33
DDX39A-220ENST00000593008 A0A096LPF7 62 aa6.72□□□□□ -1.33
DDX39A-220ENST00000593008 TRGV4A0A0C4DH28 118 aa6.72□□□□□ -1.33
DDX39A-220ENST00000593008 FAM231BA6NCW3 169 aa6.72□□□□□ -1.33
DDX39A-220ENST00000593008 A8MWV9 139 aa6.72□□□□□ -1.33
DDX39A-220ENST00000593008 SLC25A29Q8N8R3 303 aa6.72□□□□□ -1.33
DDX39A-220ENST00000593008 DEFB104AQ8WTQ1 72 aa6.72□□□□□ -1.33
DDX39A-220ENST00000593008 BORCS7Q96B45 105 aa6.72□□□□□ -1.33
DDX39A-220ENST00000593008 KMT2AQ03164 3969 aa6.71□□□□□ -1.33
DDX39A-220ENST00000593008 DNAH2Q9P225 4427 aa6.71□□□□□ -1.34
DDX39A-220ENST00000593008 CRYBA4P53673 196 aa6.71□□□□□ -1.34
DDX39A-220ENST00000593008 HBBP68871 147 aa6.71□□□□□ -1.34
DDX39A-220ENST00000593008 RIGQ13278 110 aa6.71□□□□□ -1.34
DDX39A-220ENST00000593008 ELOBQ15370 118 aa6.71□□□□□ -1.34
DDX39A-220ENST00000593008 RPL39LQ96EH5 51 aaKnown RBP6.71□□□□□ -1.34
DDX39A-220ENST00000593008 IMMP2LQ96T52 175 aa6.71□□□□□ -1.34
DDX39A-220ENST00000593008 GAGE12JA6NER3 117 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 F5H697 171 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 TRGC1P0CF51 173 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 RPS10P46783 165 aaKnown RBP6.7□□□□□ -1.34
DDX39A-220ENST00000593008 GAGE1Q13065 139 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 GAGE4Q13068 117 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 GAGE5Q13069 117 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 GAGE13Q4V321 117 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 WDR73Q6P4I2 378 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 KCNIP4Q6PIL6 250 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 TMEM136Q6ZRR5 245 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 NEGR1Q7Z3B1 354 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.7□□□□□ -1.34
DDX39A-220ENST00000593008 C15orf53Q8NAA6 179 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 GATD1Q8NB37 220 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 BTF3L4Q96K17 158 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 DPH3P1Q9H4G8 78 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 TMEM242Q9NWH2 141 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 HHLA3Q9XRX5 114 aa6.7□□□□□ -1.34
DDX39A-220ENST00000593008 K7EQD1 137 aa6.69□□□□□ -1.34
DDX39A-220ENST00000593008 RHODO00212 210 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms