RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	RAB24	Q969Q5	203 aa		11.86	□□□□□ -0.51
CIRBP-238	ENST00000592412	CYTL1	Q9NRR1	136 aa		11.86	□□□□□ -0.51
CIRBP-238	ENST00000592412	EPDR1	Q9UM22	224 aa		11.86	□□□□□ -0.51
CIRBP-238	ENST00000592412	RNF213	Q63HN8	5207 aa		11.85	□□□□□ -0.51
CIRBP-238	ENST00000592412	hCG_2014768	A0A024R1R8	64 aa		11.85	□□□□□ -0.51
CIRBP-238	ENST00000592412		A0A0D9SG52	128 aa		11.85	□□□□□ -0.51
CIRBP-238	ENST00000592412	GCHFR	P30047	84 aa		11.85	□□□□□ -0.51
CIRBP-238	ENST00000592412	SUMO1	P63165	101 aa	Known RBP	11.85	□□□□□ -0.51
CIRBP-238	ENST00000592412	LRP2	P98164	4655 aa		11.85	□□□□□ -0.51
CIRBP-238	ENST00000592412	ZFP69	Q49AA0	526 aa		11.85	□□□□□ -0.51
CIRBP-238	ENST00000592412	DMRTA1	Q5VZB9	504 aa		11.85	□□□□□ -0.51
CIRBP-238	ENST00000592412	UBE2W	Q96B02	151 aa		11.85	□□□□□ -0.51
CIRBP-238	ENST00000592412	DAZAP1	Q96EP5	407 aa	Known RBP	11.85	□□□□□ -0.51
CIRBP-238	ENST00000592412	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.85	□□□□□ -0.51
CIRBP-238	ENST00000592412	TNXB	P22105	4242 aa		11.84	□□□□□ -0.51
CIRBP-238	ENST00000592412	KANTR	A0A1W2PQU2	76 aa		11.84	□□□□□ -0.51
CIRBP-238	ENST00000592412	FGF8	P55075	233 aa	Predicted RBP	11.84	□□□□□ -0.51
CIRBP-238	ENST00000592412		K7EQM0	130 aa		11.83	□□□□□ -0.52
CIRBP-238	ENST00000592412	S100A4	P26447	101 aa	Known RBP	11.83	□□□□□ -0.52
CIRBP-238	ENST00000592412	AKR1C8P	Q5T2L2	129 aa		11.83	□□□□□ -0.52
CIRBP-238	ENST00000592412	TCTE3	Q8IZS6	198 aa		11.83	□□□□□ -0.52
CIRBP-238	ENST00000592412	IL36B	Q9NZH7	164 aa		11.83	□□□□□ -0.52
CIRBP-238	ENST00000592412	URGCP-MRPS24	S4R325	110 aa		11.83	□□□□□ -0.52
CIRBP-238	ENST00000592412	TRAV34	A0A0B4J273	112 aa		11.82	□□□□□ -0.52
CIRBP-238	ENST00000592412		H3BVH4	76 aa		11.82	□□□□□ -0.52
CIRBP-238	ENST00000592412	BCL2L11	O43521	198 aa		11.82	□□□□□ -0.52
CIRBP-238	ENST00000592412	PFDN1	O60925	122 aa		11.82	□□□□□ -0.52
CIRBP-238	ENST00000592412	ASIP	P42127	132 aa		11.82	□□□□□ -0.52
CIRBP-238	ENST00000592412	SAPCD1	Q5SSQ6	148 aa		11.82	□□□□□ -0.52
CIRBP-238	ENST00000592412	ZNF471	Q9BX82	626 aa	Predicted RBP	11.82	□□□□□ -0.52
CIRBP-238	ENST00000592412	CXorf1	O96002	111 aa		11.81	□□□□□ -0.52
CIRBP-238	ENST00000592412	MT1HL1	P0DM35	61 aa		11.81	□□□□□ -0.52
CIRBP-238	ENST00000592412	CRIP1	P50238	77 aa		11.81	□□□□□ -0.52
CIRBP-238	ENST00000592412	RPL37A	P61513	92 aa	Known RBP	11.81	□□□□□ -0.52
CIRBP-238	ENST00000592412	CHCHD7	Q9BUK0	85 aa		11.81	□□□□□ -0.52
CIRBP-238	ENST00000592412	ARL2-SNX15	V9GYD0	113 aa		11.81	□□□□□ -0.52
CIRBP-238	ENST00000592412	CTXND1	A0A1B0GTU2	59 aa		11.8	□□□□□ -0.52
CIRBP-238	ENST00000592412	SEC11B	P0C7V7	166 aa		11.8	□□□□□ -0.52
CIRBP-238	ENST00000592412	DNLZ	Q5SXM8	178 aa		11.8	□□□□□ -0.52
CIRBP-238	ENST00000592412	ENHO	Q6UWT2	76 aa		11.8	□□□□□ -0.52
CIRBP-238	ENST00000592412	TMUB2	Q71RG4	321 aa		11.8	□□□□□ -0.52
CIRBP-238	ENST00000592412	AKAP14	Q86UN6	197 aa		11.8	□□□□□ -0.52
CIRBP-238	ENST00000592412		A0A087WWL8	130 aa		11.79	□□□□□ -0.52
CIRBP-238	ENST00000592412		A0A087WX48	190 aa		11.79	□□□□□ -0.52
CIRBP-238	ENST00000592412	FABP5P3	A8MUU1	101 aa		11.79	□□□□□ -0.52
CIRBP-238	ENST00000592412	RHOD	O00212	210 aa		11.79	□□□□□ -0.52
CIRBP-238	ENST00000592412	ARMS2	P0C7Q2	107 aa		11.79	□□□□□ -0.52
CIRBP-238	ENST00000592412	ZNF726P1	Q15940	193 aa		11.79	□□□□□ -0.52
CIRBP-238	ENST00000592412	FAM74A4	Q5TZK3	123 aa		11.79	□□□□□ -0.52
CIRBP-238	ENST00000592412	TMEM167B	Q9NRX6	74 aa		11.79	□□□□□ -0.52
CIRBP-238	ENST00000592412		B4DEV8	164 aa		11.78	□□□□□ -0.52
CIRBP-238	ENST00000592412	KRBOX1	C9JBD0	128 aa		11.78	□□□□□ -0.52
CIRBP-238	ENST00000592412	UBE2D3	P61077	147 aa		11.78	□□□□□ -0.52
CIRBP-238	ENST00000592412	UBE2D2	P62837	147 aa		11.78	□□□□□ -0.52
CIRBP-238	ENST00000592412	EIF5A	P63241	154 aa	Known RBP	11.78	□□□□□ -0.52
CIRBP-238	ENST00000592412	SFRP2	Q96HF1	295 aa		11.78	□□□□□ -0.52
CIRBP-238	ENST00000592412	GRIFIN	A4D1Z8	144 aa		11.77	□□□□□ -0.53
CIRBP-238	ENST00000592412	PANO1	I0J062	215 aa		11.77	□□□□□ -0.53
CIRBP-238	ENST00000592412	ELOB	Q15370	118 aa		11.77	□□□□□ -0.53
CIRBP-238	ENST00000592412		Q86TA4	180 aa		11.77	□□□□□ -0.53
CIRBP-238	ENST00000592412	ZC2HC1A	Q96GY0	325 aa		11.77	□□□□□ -0.53
CIRBP-238	ENST00000592412		A0A1B0GVG6	124 aa		11.76	□□□□□ -0.53
CIRBP-238	ENST00000592412		A0A1W2PRE2	83 aa		11.76	□□□□□ -0.53
CIRBP-238	ENST00000592412		M0R036	132 aa		11.76	□□□□□ -0.53
CIRBP-238	ENST00000592412	TPT1	P13693	172 aa	Known RBP	11.76	□□□□□ -0.53
CIRBP-238	ENST00000592412		Q0VG73	95 aa		11.76	□□□□□ -0.53
CIRBP-238	ENST00000592412	C14orf177	Q52M58	125 aa		11.76	□□□□□ -0.53
CIRBP-238	ENST00000592412	C1orf43	Q9BWL3	253 aa		11.76	□□□□□ -0.53
CIRBP-238	ENST00000592412	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.76	□□□□□ -0.53
CIRBP-238	ENST00000592412	MAP1LC3B2	A6NCE7	125 aa		11.75	□□□□□ -0.53
CIRBP-238	ENST00000592412	UMAD1	C9J7I0	102 aa		11.75	□□□□□ -0.53
CIRBP-238	ENST00000592412	USP17L23	D6RBM5	183 aa		11.75	□□□□□ -0.53
CIRBP-238	ENST00000592412	PRSS1	P07477	247 aa		11.75	□□□□□ -0.53
CIRBP-238	ENST00000592412	MPV17L2	Q567V2	206 aa		11.75	□□□□□ -0.53
CIRBP-238	ENST00000592412	MAP1LC3B	Q9GZQ8	125 aa		11.75	□□□□□ -0.53
CIRBP-238	ENST00000592412	TRBV10-1	A0A0K0K1A3	114 aa		11.74	□□□□□ -0.53
CIRBP-238	ENST00000592412	SH2D1A	O60880	128 aa		11.74	□□□□□ -0.53
CIRBP-238	ENST00000592412	FHIT	P49789	147 aa		11.74	□□□□□ -0.53
CIRBP-238	ENST00000592412	COX8C	Q7Z4L0	72 aa		11.74	□□□□□ -0.53
CIRBP-238	ENST00000592412	TRBV7-3	A0A075B6L6	115 aa		11.73	□□□□□ -0.53
CIRBP-238	ENST00000592412	TRBV6-8	A0A0A6YYG3	113 aa		11.73	□□□□□ -0.53
CIRBP-238	ENST00000592412		M0R381	172 aa		11.73	□□□□□ -0.53
CIRBP-238	ENST00000592412	PEX7	O00628	323 aa		11.73	□□□□□ -0.53
CIRBP-238	ENST00000592412	RPL36A	P83881	106 aa	Known RBP	11.73	□□□□□ -0.53
CIRBP-238	ENST00000592412	C15orf54	Q8N8G6	183 aa		11.73	□□□□□ -0.53
CIRBP-238	ENST00000592412	OR10G8	Q8NGN5	311 aa		11.73	□□□□□ -0.53
CIRBP-238	ENST00000592412	STOML3	Q8TAV4	291 aa		11.73	□□□□□ -0.53
CIRBP-238	ENST00000592412	FAM213B	Q8TBF2	198 aa		11.73	□□□□□ -0.53
CIRBP-238	ENST00000592412	RPL36AL	Q969Q0	106 aa	Known RBP	11.73	□□□□□ -0.53
CIRBP-238	ENST00000592412	UBE2G2	P60604	165 aa		11.72	□□□□□ -0.53
CIRBP-238	ENST00000592412	KRTAP26-1	Q6PEX3	210 aa		11.72	□□□□□ -0.53
CIRBP-238	ENST00000592412	KCNIP4	Q6PIL6	250 aa		11.72	□□□□□ -0.53
CIRBP-238	ENST00000592412	C9orf163	Q8N9P6	203 aa		11.72	□□□□□ -0.53
CIRBP-238	ENST00000592412	PHLDA3	Q9Y5J5	127 aa		11.72	□□□□□ -0.53
CIRBP-238	ENST00000592412	TMSB15B	A0A087X1C1	80 aa		11.71	□□□□□ -0.53
CIRBP-238	ENST00000592412	TMEM262	E9PQX1	116 aa		11.71	□□□□□ -0.53
CIRBP-238	ENST00000592412	IFNA7	P01567	189 aa		11.71	□□□□□ -0.53
CIRBP-238	ENST00000592412	HLA-DQA1	P01909	254 aa		11.71	□□□□□ -0.53
CIRBP-238	ENST00000592412	EIF5AL1	Q6IS14	154 aa	Known RBP	11.71	□□□□□ -0.53
CIRBP-238	ENST00000592412	CRP	P02741	224 aa		11.7	□□□□□ -0.54

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