RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TRAV12-2A0A075B6T6 113 aa6.6□□□□□ -1.35
BRCA1-226ENST00000591534 F2Z2F3 143 aa6.6□□□□□ -1.35
BRCA1-226ENST00000591534 H3BTX0 84 aa6.6□□□□□ -1.35
BRCA1-226ENST00000591534 M0R3E3 92 aa6.6□□□□□ -1.35
BRCA1-226ENST00000591534 CRXO43186 299 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-226ENST00000591534 GATCO43716 136 aaKnown RBP6.6□□□□□ -1.35
BRCA1-226ENST00000591534 EIF3GO75821 320 aaKnown RBP eCLIP6.6□□□□□ -1.35
BRCA1-226ENST00000591534 GPX1P07203 203 aa6.6□□□□□ -1.35
BRCA1-226ENST00000591534 PFN1P07737 140 aaKnown RBP6.6□□□□□ -1.35
BRCA1-226ENST00000591534 CXCL1P09341 107 aa6.6□□□□□ -1.35
BRCA1-226ENST00000591534 CRISP2P16562 243 aa6.6□□□□□ -1.35
BRCA1-226ENST00000591534 CDKN1BP46527 198 aa6.6□□□□□ -1.35
BRCA1-226ENST00000591534 GNG5P63218 68 aa6.59□□□□□ -1.35
BRCA1-226ENST00000591534 OR5I1Q13606 314 aa6.59□□□□□ -1.35
BRCA1-226ENST00000591534 TSKUQ8WUA8 353 aa6.59□□□□□ -1.35
BRCA1-226ENST00000591534 TMEM263Q8WUH6 116 aaKnown RBP6.59□□□□□ -1.35
BRCA1-226ENST00000591534 DERL1Q9BUN8 251 aa6.59□□□□□ -1.35
BRCA1-226ENST00000591534 RPP21Q9H633 154 aaKnown RBP6.59□□□□□ -1.35
BRCA1-226ENST00000591534 Q9H8V8 135 aa6.59□□□□□ -1.35
BRCA1-226ENST00000591534 NAT8BQ9UHF3 227 aa6.59□□□□□ -1.35
BRCA1-226ENST00000591534 LINC00588Q9Y4M8 146 aa6.59□□□□□ -1.35
BRCA1-226ENST00000591534 TRAV34A0A0B4J273 112 aa6.58□□□□□ -1.36
BRCA1-226ENST00000591534 IGLV2-11P01706 119 aa6.58□□□□□ -1.36
BRCA1-226ENST00000591534 PRM2P04554 102 aa6.58□□□□□ -1.36
BRCA1-226ENST00000591534 AZU1P20160 251 aa6.58□□□□□ -1.36
BRCA1-226ENST00000591534 WDR73Q6P4I2 378 aa6.58□□□□□ -1.36
BRCA1-226ENST00000591534 ATP5L2Q7Z4Y8 100 aa6.58□□□□□ -1.36
BRCA1-226ENST00000591534 KRTAP4-11Q9BYQ6 195 aa6.58□□□□□ -1.36
BRCA1-226ENST00000591534 AGPAT4-IT1Q9H0P7 198 aa6.58□□□□□ -1.36
BRCA1-226ENST00000591534 NOP10Q9NPE3 64 aaKnown RBP6.58□□□□□ -1.36
BRCA1-226ENST00000591534 IL36BQ9NZH7 164 aa6.58□□□□□ -1.36
BRCA1-226ENST00000591534 DYNC1H1Q14204 4646 aaKnown RBP6.57□□□□□ -1.36
BRCA1-226ENST00000591534 MUC4Q99102 2169 aa6.57□□□□□ -1.36
BRCA1-226ENST00000591534 TRBV20OR9-2A0A075B6H5 130 aa6.57□□□□□ -1.36
BRCA1-226ENST00000591534 IGKV2-40A0A087WW87 121 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-226ENST00000591534 PLAC8L1A1L4L8 177 aa6.57□□□□□ -1.36
BRCA1-226ENST00000591534 SNURFLB1AK76 121 aa6.57□□□□□ -1.36
BRCA1-226ENST00000591534 H3BNG1 76 aa6.57□□□□□ -1.36
BRCA1-226ENST00000591534 IGKV2D-40P01614 121 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-226ENST00000591534 MT-ND6P03923 174 aa6.57□□□□□ -1.36
BRCA1-226ENST00000591534 PRR27Q6MZM9 219 aa6.57□□□□□ -1.36
BRCA1-226ENST00000591534 FAM159AQ6UWV7 190 aa6.57□□□□□ -1.36
BRCA1-226ENST00000591534 SMIM15Q7Z3B0 74 aa6.57□□□□□ -1.36
BRCA1-226ENST00000591534 SPATA12Q7Z6I5 190 aa6.57□□□□□ -1.36
BRCA1-226ENST00000591534 Q8N1X5 172 aa6.57□□□□□ -1.36
BRCA1-226ENST00000591534 ABCA13Q86UQ4 5058 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 TRBV24-1A0A075B6N3 115 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 TRAV26-1A0A087WT03 109 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 TRAV8-1A0A0A6YYK1 113 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 KLLNB2CW77 178 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 FOXA3P55318 350 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-226ENST00000591534 FOXI1Q12951 378 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 OR2D3Q8NGH3 330 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 RNASE8Q8TDE3 154 aaKnown RBP6.56□□□□□ -1.36
BRCA1-226ENST00000591534 LINC00479Q96M42 142 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 VGLL1Q99990 258 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 PYGO2Q9BRQ0 406 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 UPK3BQ9BT76 320 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 KRTAP4-5Q9BYR2 181 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 SCRT2Q9NQ03 307 aa6.56□□□□□ -1.36
BRCA1-226ENST00000591534 SMIM27A0A1W2PRY6 76 aa6.55□□□□□ -1.36
BRCA1-226ENST00000591534 C7orf71A4D174 169 aa6.55□□□□□ -1.36
BRCA1-226ENST00000591534 C19orf71A6NCJ1 209 aa6.55□□□□□ -1.36
BRCA1-226ENST00000591534 PRAC2D3DTV9 90 aa6.55□□□□□ -1.36
BRCA1-226ENST00000591534 IGLV2-8P01709 118 aa6.55□□□□□ -1.36
BRCA1-226ENST00000591534 ORM1P02763 201 aa6.55□□□□□ -1.36
BRCA1-226ENST00000591534 S100A4P26447 101 aaKnown RBP6.55□□□□□ -1.36
BRCA1-226ENST00000591534 CACNG7P62955 275 aa6.55□□□□□ -1.36
BRCA1-226ENST00000591534 RIGQ13278 110 aa6.55□□□□□ -1.36
BRCA1-226ENST00000591534 FAM19A4Q96LR4 140 aa6.55□□□□□ -1.36
BRCA1-226ENST00000591534 A0A0J9YY99 117 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 K7EN84 100 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 GAGE7O76087 117 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 GAGE12FP0CL80 117 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 GAGE12GP0CL81 117 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 GAGE12IP0CL82 117 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 ASIPP42127 132 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 BTN1A1Q13410 526 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 TDRG1Q3Y452 100 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 PIK3CD-AS1Q5SR53 167 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 FRZBQ92765 325 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 ZC2HC1AQ96GY0 325 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 LINC00467Q9BRT7 94 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 MRPS16Q9Y3D3 137 aaKnown RBP6.54□□□□□ -1.36
BRCA1-226ENST00000591534 V9GYV3 84 aa6.54□□□□□ -1.36
BRCA1-226ENST00000591534 TRGV2A0A075B6R0 118 aa6.53□□□□□ -1.36
BRCA1-226ENST00000591534 A0A1B0GUT8 65 aa6.53□□□□□ -1.36
BRCA1-226ENST00000591534 SH2D1AO60880 128 aa6.53□□□□□ -1.36
BRCA1-226ENST00000591534 HLA-DQA1P01909 254 aa6.53□□□□□ -1.36
BRCA1-226ENST00000591534 TYMSP04818 313 aa6.53□□□□□ -1.36
BRCA1-226ENST00000591534 OR5AL1P0C617 328 aa6.53□□□□□ -1.36
BRCA1-226ENST00000591534 RNASE4P34096 147 aaKnown RBP6.53□□□□□ -1.36
BRCA1-226ENST00000591534 SUMO2P61956 95 aaKnown RBP6.53□□□□□ -1.36
BRCA1-226ENST00000591534 DAZ2Q13117 558 aaKnown RBP6.53□□□□□ -1.36
BRCA1-226ENST00000591534 ERCC8Q13216 396 aa6.53□□□□□ -1.36
BRCA1-226ENST00000591534 DNLZQ5SXM8 178 aa6.53□□□□□ -1.36
BRCA1-226ENST00000591534 GFI1BQ5VTD9 330 aa6.53□□□□□ -1.36
BRCA1-226ENST00000591534 LINC00612Q8N6U2 182 aa6.53□□□□□ -1.36
BRCA1-226ENST00000591534 RNASE7Q9H1E1 156 aaKnown RBP6.53□□□□□ -1.36
BRCA1-226ENST00000591534 HIGD1CA8MV81 97 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms