RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 OCC1Q8TAD7 63 aa8.19□□□□□ -1.1
LIG3-213ENST00000590630 SAMD10Q9BYL1 202 aa8.19□□□□□ -1.1
LIG3-213ENST00000590630 LY96Q9Y6Y9 160 aa8.19□□□□□ -1.1
LIG3-213ENST00000590630 A0A087WWL8 130 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 K7EN84 100 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 CRYGDP07320 174 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 IGLC6P0CF74 106 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 TTC32Q5I0X7 151 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 SOHLH1Q5JUK2 328 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 COMMD7Q86VX2 200 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 FER1L6-AS1Q8NA97 138 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 NUDT10Q8NFP7 164 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 NUDT11Q96G61 164 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 SMIM7Q9BQ49 75 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 DNAH10Q8IVF4 4471 aa8.18□□□□□ -1.1
LIG3-213ENST00000590630 EPPK1P58107 5090 aaKnown RBP8.18□□□□□ -1.1
LIG3-213ENST00000590630 A0A1W2PPQ1 181 aa8.17□□□□□ -1.1
LIG3-213ENST00000590630 F2Z2F3 143 aa8.17□□□□□ -1.1
LIG3-213ENST00000590630 SRP19P09132 144 aaKnown RBP8.17□□□□□ -1.1
LIG3-213ENST00000590630 GZMBP10144 247 aa8.17□□□□□ -1.1
LIG3-213ENST00000590630 TIRAPP58753 221 aa8.17□□□□□ -1.1
LIG3-213ENST00000590630 Q6ZSN1 163 aa8.17□□□□□ -1.1
LIG3-213ENST00000590630 LINC00336Q6ZUF6 198 aa8.17□□□□□ -1.1
LIG3-213ENST00000590630 TPPP3Q9BW30 176 aa8.17□□□□□ -1.1
LIG3-213ENST00000590630 SMDT1Q9H4I9 107 aa8.17□□□□□ -1.1
LIG3-213ENST00000590630 RPP21Q9H633 154 aaKnown RBP8.17□□□□□ -1.1
LIG3-213ENST00000590630 DNAH2Q9P225 4427 aa8.17□□□□□ -1.1
LIG3-213ENST00000590630 MUC21A0A0G2JKD1 596 aa8.16□□□□□ -1.1
LIG3-213ENST00000590630 MUC21A0A140T8X8 626 aa8.16□□□□□ -1.1
LIG3-213ENST00000590630 ZNF727A8MUV8 499 aa8.16□□□□□ -1.1
LIG3-213ENST00000590630 SIVA1O15304 175 aa8.16□□□□□ -1.1
LIG3-213ENST00000590630 CACNG7P62955 275 aa8.16□□□□□ -1.1
LIG3-213ENST00000590630 PEA15Q15121 130 aa8.16□□□□□ -1.1
LIG3-213ENST00000590630 C1orf134Q5TEV5 83 aa8.16□□□□□ -1.1
LIG3-213ENST00000590630 FAM231DQ6ZW35 169 aa8.16□□□□□ -1.1
LIG3-213ENST00000590630 AP1S3Q96PC3 154 aa8.16□□□□□ -1.1
LIG3-213ENST00000590630 RNASE7Q9H1E1 156 aaKnown RBP8.16□□□□□ -1.1
LIG3-213ENST00000590630 TRBV10-1A0A0K0K1A3 114 aa8.15□□□□□ -1.1
LIG3-213ENST00000590630 LINC00694P0DN24 101 aa8.15□□□□□ -1.1
LIG3-213ENST00000590630 CTRLP40313 264 aa8.15□□□□□ -1.1
LIG3-213ENST00000590630 RAB4BP61018 213 aa8.15□□□□□ -1.1
LIG3-213ENST00000590630 FAM74A3Q4VXF1 159 aa8.15□□□□□ -1.1
LIG3-213ENST00000590630 LINC01551Q86U37 167 aa8.15□□□□□ -1.1
LIG3-213ENST00000590630 C14orf178Q8N769 122 aaPredicted RBP8.15□□□□□ -1.1
LIG3-213ENST00000590630 ATP6V0E2Q8NHE4 81 aa8.15□□□□□ -1.1
LIG3-213ENST00000590630 HECTD4Q9Y4D8 3996 aa8.14□□□□□ -1.11
LIG3-213ENST00000590630 K7EP13 123 aa8.14□□□□□ -1.11
LIG3-213ENST00000590630 RTL8CO15255 209 aa8.14□□□□□ -1.11
LIG3-213ENST00000590630 SMIM17P0DL12 118 aa8.14□□□□□ -1.11
LIG3-213ENST00000590630 BTF3P20290 206 aaKnown RBP8.14□□□□□ -1.11
LIG3-213ENST00000590630 ERVFC1-1P60608 527 aa8.14□□□□□ -1.11
LIG3-213ENST00000590630 SSTP61278 116 aa8.14□□□□□ -1.11
LIG3-213ENST00000590630 ZNF56Q15929 161 aa8.14□□□□□ -1.11
LIG3-213ENST00000590630 WDR73Q6P4I2 378 aa8.14□□□□□ -1.11
LIG3-213ENST00000590630 LYZL1Q6UWQ5 148 aa8.14□□□□□ -1.11
LIG3-213ENST00000590630 GTSF1LQ9H1H1 148 aa8.14□□□□□ -1.11
LIG3-213ENST00000590630 GAGE12JA6NER3 117 aa8.13□□□□□ -1.11
LIG3-213ENST00000590630 A8MWL6 223 aa8.13□□□□□ -1.11
LIG3-213ENST00000590630 GATCO43716 136 aaKnown RBP8.13□□□□□ -1.11
LIG3-213ENST00000590630 GAGE1Q13065 139 aa8.13□□□□□ -1.11
LIG3-213ENST00000590630 GAGE4Q13068 117 aa8.13□□□□□ -1.11
LIG3-213ENST00000590630 GAGE5Q13069 117 aa8.13□□□□□ -1.11
LIG3-213ENST00000590630 GAGE13Q4V321 117 aa8.13□□□□□ -1.11
LIG3-213ENST00000590630 CT83Q5H943 113 aa8.13□□□□□ -1.11
LIG3-213ENST00000590630 C6orf223Q8N319 242 aa8.13□□□□□ -1.11
LIG3-213ENST00000590630 CNFNQ9BYD5 112 aa8.13□□□□□ -1.11
LIG3-213ENST00000590630 KRTAP1-5Q9BYS1 174 aa8.13□□□□□ -1.11
LIG3-213ENST00000590630 KIF25-AS1Q9Y6Z4 181 aa8.13□□□□□ -1.11
LIG3-213ENST00000590630 TRAV9-2A0A087WT02 112 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 TRAV8-6A0A0B4J262 113 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 C9JQL5 133 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 F5H697 171 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 TRGC1P0CF51 173 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 DNAH10OSP0CZ25 163 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 RPL36AP83881 106 aaKnown RBP8.12□□□□□ -1.11
LIG3-213ENST00000590630 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
LIG3-213ENST00000590630 TMEM241Q24JQ0 296 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 LELP1Q5T871 98 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 WFDC10BQ8IUB3 73 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 RPL36ALQ969Q0 106 aaKnown RBP8.12□□□□□ -1.11
LIG3-213ENST00000590630 MSRB1Q9NZV6 116 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 Q9UF83 564 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 FAT2Q9NYQ8 4349 aa8.12□□□□□ -1.11
LIG3-213ENST00000590630 TRBV7-3A0A075B6L6 115 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 A0A087WWC5 75 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 PRSS29PA6NIE9 313 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 NTF3P20783 257 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 EVI2AP22794 236 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 S100A12P80511 92 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 OR10J3Q5JRS4 329 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 C15orf54Q8N8G6 183 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 OR10G8Q8NGN5 311 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 GTSF1Q8WW33 167 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 OSTCQ9NRP0 149 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 NAT8Q9UHE5 227 aa8.11□□□□□ -1.11
LIG3-213ENST00000590630 DNAH17Q9UFH2 4485 aa8.1□□□□□ -1.11
LIG3-213ENST00000590630 IGHV3-38A0A0C4DH36 116 aa8.1□□□□□ -1.11
LIG3-213ENST00000590630 LINC00315P59091 139 aa8.1□□□□□ -1.11
LIG3-213ENST00000590630 C10orf126Q8N4M7 172 aa8.1□□□□□ -1.11
LIG3-213ENST00000590630 GFRA4Q9GZZ7 299 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms