RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 Q8N3U1 123 aa14.42□□□□□ -0.1
LRP3-202ENST00000590275 MUC21A0A0G2JKD1 596 aa14.41□□□□□ -0.1
LRP3-202ENST00000590275 MUC21A0A140T8X8 626 aa14.41□□□□□ -0.1
LRP3-202ENST00000590275 SH2D6Q7Z4S9 175 aa14.41□□□□□ -0.1
LRP3-202ENST00000590275 OR10AG1Q8NH19 301 aa14.41□□□□□ -0.1
LRP3-202ENST00000590275 PHLDA3Q9Y5J5 127 aa14.41□□□□□ -0.1
LRP3-202ENST00000590275 TRBV20OR9-2A0A075B6H5 130 aa14.4□□□□□ -0.1
LRP3-202ENST00000590275 C16orf90A8MZG2 172 aa14.4□□□□□ -0.1
LRP3-202ENST00000590275 CENPWQ5EE01 88 aa14.4□□□□□ -0.1
LRP3-202ENST00000590275 FAM74A4Q5TZK3 123 aa14.4□□□□□ -0.1
LRP3-202ENST00000590275 ATP6V0E2Q8NHE4 81 aa14.4□□□□□ -0.1
LRP3-202ENST00000590275 SYT8Q8NBV8 401 aa14.39□□□□□ -0.11
LRP3-202ENST00000590275 SSBP4Q9BWG4 385 aaPredicted RBP14.39□□□□□ -0.11
LRP3-202ENST00000590275 GTSF1LQ9H1H1 148 aa14.39□□□□□ -0.11
LRP3-202ENST00000590275 IGHV3-38A0A0C4DH36 116 aa14.38□□□□□ -0.11
LRP3-202ENST00000590275 SNAI2O43623 268 aa14.38□□□□□ -0.11
LRP3-202ENST00000590275 NKX2-5P52952 324 aaPredicted RBP14.38□□□□□ -0.11
LRP3-202ENST00000590275 MEF2BQ02080 365 aaPredicted RBP14.38□□□□□ -0.11
LRP3-202ENST00000590275 LELP1Q5T871 98 aa14.38□□□□□ -0.11
LRP3-202ENST00000590275 BOLA1Q9Y3E2 137 aa14.38□□□□□ -0.11
LRP3-202ENST00000590275 ABCA13Q86UQ4 5058 aa14.38□□□□□ -0.11
LRP3-202ENST00000590275 CXCL1P09341 107 aa14.37□□□□□ -0.11
LRP3-202ENST00000590275 GZMBP10144 247 aa14.37□□□□□ -0.11
LRP3-202ENST00000590275 BCL2P10415 239 aa14.37□□□□□ -0.11
LRP3-202ENST00000590275 LINC01556Q5JQF7 62 aa14.37□□□□□ -0.11
LRP3-202ENST00000590275 ALKAL2Q6UX46 152 aa14.37□□□□□ -0.11
LRP3-202ENST00000590275 ZFP82Q8N141 532 aa14.37□□□□□ -0.11
LRP3-202ENST00000590275 MSRB1Q9NZV6 116 aa14.37□□□□□ -0.11
LRP3-202ENST00000590275 C19orf71A6NCJ1 209 aa14.36□□□□□ -0.11
LRP3-202ENST00000590275 EVI2AP22794 236 aa14.36□□□□□ -0.11
LRP3-202ENST00000590275 RHODO00212 210 aa14.35□□□□□ -0.11
LRP3-202ENST00000590275 OR10J3Q5JRS4 329 aa14.35□□□□□ -0.11
LRP3-202ENST00000590275 TRAV9-2A0A087WT02 112 aa14.34□□□□□ -0.11
LRP3-202ENST00000590275 IGHV3-30P01768 117 aa14.34□□□□□ -0.11
LRP3-202ENST00000590275 IGHV3-33P01772 117 aa14.34□□□□□ -0.11
LRP3-202ENST00000590275 IGHV3-30-3P0DP02 117 aa14.34□□□□□ -0.11
LRP3-202ENST00000590275 IGHV3-30-5P0DP03 117 aa14.34□□□□□ -0.11
LRP3-202ENST00000590275 SSTP61278 116 aa14.34□□□□□ -0.11
LRP3-202ENST00000590275 RBFOX3A6NFN3 312 aa14.33□□□□□ -0.12
LRP3-202ENST00000590275 TEX46H3BTG2 121 aa14.33□□□□□ -0.12
LRP3-202ENST00000590275 OR5AL1P0C617 328 aa14.33□□□□□ -0.12
LRP3-202ENST00000590275 KRTAP4-5Q9BYR2 181 aa14.33□□□□□ -0.12
LRP3-202ENST00000590275 MED9Q9NWA0 146 aa14.33□□□□□ -0.12
LRP3-202ENST00000590275 VAX2Q9UIW0 290 aa14.33□□□□□ -0.12
LRP3-202ENST00000590275 A0A087WTM6 91 aa14.32□□□□□ -0.12
LRP3-202ENST00000590275 TRAV8-6A0A0B4J262 113 aa14.32□□□□□ -0.12
LRP3-202ENST00000590275 IBA57-AS1B1ANH7 110 aa14.32□□□□□ -0.12
LRP3-202ENST00000590275 PDE6DO43924 150 aa14.32□□□□□ -0.12
LRP3-202ENST00000590275 IGLC6P0CF74 106 aa14.32□□□□□ -0.12
LRP3-202ENST00000590275 KIF25-AS1Q9Y6Z4 181 aa14.32□□□□□ -0.12
LRP3-202ENST00000590275 K7EP13 123 aa14.31□□□□□ -0.12
LRP3-202ENST00000590275 GNG4P50150 75 aa14.31□□□□□ -0.12
LRP3-202ENST00000590275 IFNA1P01562 189 aa14.3□□□□□ -0.12
LRP3-202ENST00000590275 NFE4Q86UQ8 179 aa14.3□□□□□ -0.12
LRP3-202ENST00000590275 LYPD6BQ8NI32 183 aa14.3□□□□□ -0.12
LRP3-202ENST00000590275 K7EN84 100 aa14.29□□□□□ -0.12
LRP3-202ENST00000590275 OR2D3Q8NGH3 330 aa14.29□□□□□ -0.12
LRP3-202ENST00000590275 UBE2D3P61077 147 aa14.28□□□□□ -0.12
LRP3-202ENST00000590275 UBE2D2P62837 147 aa14.28□□□□□ -0.12
LRP3-202ENST00000590275 DAZ4Q86SG3 579 aaKnown RBP14.28□□□□□ -0.12
LRP3-202ENST00000590275 C10orf126Q8N4M7 172 aa14.28□□□□□ -0.12
LRP3-202ENST00000590275 NEXN-AS1Q8NBZ9 246 aa14.28□□□□□ -0.12
LRP3-202ENST00000590275 DNAJC30Q96LL9 226 aa14.28□□□□□ -0.12
LRP3-202ENST00000590275 DAZ3Q9NR90 486 aaKnown RBP14.28□□□□□ -0.12
LRP3-202ENST00000590275 LRCOL1A6NCL2 159 aa14.27□□□□□ -0.13
LRP3-202ENST00000590275 SPANXN1Q5VSR9 72 aa14.27□□□□□ -0.13
LRP3-202ENST00000590275 SMIM12Q96EX1 92 aa14.27□□□□□ -0.13
LRP3-202ENST00000590275 Q9HAA7 133 aa14.27□□□□□ -0.13
LRP3-202ENST00000590275 TRBV10-1A0A0K0K1A3 114 aa14.26□□□□□ -0.13
LRP3-202ENST00000590275 ERVFC1-1P60608 527 aa14.26□□□□□ -0.13
LRP3-202ENST00000590275 RAB4BP61018 213 aa14.26□□□□□ -0.13
LRP3-202ENST00000590275 NUDT10Q8NFP7 164 aa14.26□□□□□ -0.13
LRP3-202ENST00000590275 OR10G8Q8NGN5 311 aa14.26□□□□□ -0.13
LRP3-202ENST00000590275 OCC1Q8TAD7 63 aa14.26□□□□□ -0.13
LRP3-202ENST00000590275 NUDT11Q96G61 164 aa14.26□□□□□ -0.13
LRP3-202ENST00000590275 CDK2AP2O75956 126 aa14.25□□□□□ -0.13
LRP3-202ENST00000590275 ZNF56Q15929 161 aa14.25□□□□□ -0.13
LRP3-202ENST00000590275 FER1L6-AS1Q8NA97 138 aa14.25□□□□□ -0.13
LRP3-202ENST00000590275 TPPP3Q9BW30 176 aa14.25□□□□□ -0.13
LRP3-202ENST00000590275 TRBV7-3A0A075B6L6 115 aa14.24□□□□□ -0.13
LRP3-202ENST00000590275 DAZAP1Q96EP5 407 aaKnown RBP14.24□□□□□ -0.13
LRP3-202ENST00000590275 RNASE7Q9H1E1 156 aaKnown RBP14.24□□□□□ -0.13
LRP3-202ENST00000590275 P01737 135 aa14.23□□□□□ -0.13
LRP3-202ENST00000590275 BLOC1S1P78537 153 aa14.23□□□□□ -0.13
LRP3-202ENST00000590275 WFDC2Q14508 124 aa14.23□□□□□ -0.13
LRP3-202ENST00000590275 NIT1Q86X76 327 aa14.23□□□□□ -0.13
LRP3-202ENST00000590275 TAGLN2P37802 199 aaKnown RBP14.22□□□□□ -0.13
LRP3-202ENST00000590275 RPS20P60866 119 aaKnown RBP14.22□□□□□ -0.13
LRP3-202ENST00000590275 RPL36AP83881 106 aaKnown RBP14.22□□□□□ -0.13
LRP3-202ENST00000590275 LYZL1Q6UWQ5 148 aa14.22□□□□□ -0.13
LRP3-202ENST00000590275 MAPKAPK5-AS1Q8N8E1 139 aa14.22□□□□□ -0.13
LRP3-202ENST00000590275 RPL36ALQ969Q0 106 aaKnown RBP14.22□□□□□ -0.13
LRP3-202ENST00000590275 A0A087WWC5 75 aa14.21□□□□□ -0.13
LRP3-202ENST00000590275 KRTAP10-1P60331 282 aa14.21□□□□□ -0.13
LRP3-202ENST00000590275 PGPEP1Q9NXJ5 209 aa14.21□□□□□ -0.13
LRP3-202ENST00000590275 DNAH8Q96JB1 4490 aa14.21□□□□□ -0.14
LRP3-202ENST00000590275 NTM-AS1Q6ZSK4 140 aa14.2□□□□□ -0.14
LRP3-202ENST00000590275 AP1S3Q96PC3 154 aa14.2□□□□□ -0.14
LRP3-202ENST00000590275 FAT1Q14517 4588 aa14.19□□□□□ -0.14
LRP3-202ENST00000590275 F5H697 171 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms