RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 RPS20P60866 119 aaKnown RBP11.99□□□□□ -0.49
H3F3B-207ENST00000589417 M0R381 172 aa11.98□□□□□ -0.49
H3F3B-207ENST00000589417 OR10AG1Q8NH19 301 aa11.98□□□□□ -0.49
H3F3B-207ENST00000589417 DAZAP1Q96EP5 407 aaKnown RBP11.98□□□□□ -0.49
H3F3B-207ENST00000589417 IGLC6P0CF74 106 aa11.97□□□□□ -0.49
H3F3B-207ENST00000589417 DNAH10OSP0CZ25 163 aa11.97□□□□□ -0.49
H3F3B-207ENST00000589417 PKD1P98161 4303 aa11.97□□□□□ -0.49
H3F3B-207ENST00000589417 ATP6V0E2Q8NHE4 81 aa11.96□□□□□ -0.49
H3F3B-207ENST00000589417 FAM210AQ96ND0 272 aa11.96□□□□□ -0.49
H3F3B-207ENST00000589417 GTSF1LQ9H1H1 148 aa11.96□□□□□ -0.49
H3F3B-207ENST00000589417 TRAV9-2A0A087WT02 112 aa11.95□□□□□ -0.5
H3F3B-207ENST00000589417 A0A087WWL8 130 aa11.95□□□□□ -0.5
H3F3B-207ENST00000589417 TRBV10-1A0A0K0K1A3 114 aa11.95□□□□□ -0.5
H3F3B-207ENST00000589417 XKRY2A2RUG3 117 aa11.95□□□□□ -0.5
H3F3B-207ENST00000589417 P01737 135 aa11.95□□□□□ -0.5
H3F3B-207ENST00000589417 TEX261Q6UWH6 196 aa11.95□□□□□ -0.5
H3F3B-207ENST00000589417 WFDC10BQ8IUB3 73 aa11.95□□□□□ -0.5
H3F3B-207ENST00000589417 C14orf178Q8N769 122 aaPredicted RBP11.95□□□□□ -0.5
H3F3B-207ENST00000589417 OR2D3Q8NGH3 330 aa11.95□□□□□ -0.5
H3F3B-207ENST00000589417 OCC1Q8TAD7 63 aa11.95□□□□□ -0.5
H3F3B-207ENST00000589417 LY96Q9Y6Y9 160 aa11.95□□□□□ -0.5
H3F3B-207ENST00000589417 LELP1Q5T871 98 aa11.94□□□□□ -0.5
H3F3B-207ENST00000589417 FAM74A4Q5TZK3 123 aa11.94□□□□□ -0.5
H3F3B-207ENST00000589417 SPANXN1Q5VSR9 72 aa11.94□□□□□ -0.5
H3F3B-207ENST00000589417 NUDT10Q8NFP7 164 aa11.94□□□□□ -0.5
H3F3B-207ENST00000589417 NUDT11Q96G61 164 aa11.94□□□□□ -0.5
H3F3B-207ENST00000589417 Q9UF83 564 aa11.94□□□□□ -0.5
H3F3B-207ENST00000589417 DNAH11Q96DT5 4516 aa11.94□□□□□ -0.5
H3F3B-207ENST00000589417 PKHD1P08F94 4074 aa11.93□□□□□ -0.5
H3F3B-207ENST00000589417 F2Z2F3 143 aa11.93□□□□□ -0.5
H3F3B-207ENST00000589417 K7EN84 100 aa11.93□□□□□ -0.5
H3F3B-207ENST00000589417 RAB4BP61018 213 aa11.93□□□□□ -0.5
H3F3B-207ENST00000589417 TOR2AQ5JU69 321 aa11.93□□□□□ -0.5
H3F3B-207ENST00000589417 WDR73Q6P4I2 378 aa11.93□□□□□ -0.5
H3F3B-207ENST00000589417 FER1L6-AS1Q8NA97 138 aa11.93□□□□□ -0.5
H3F3B-207ENST00000589417 KIF25-AS1Q9Y6Z4 181 aa11.93□□□□□ -0.5
H3F3B-207ENST00000589417 GAGE12JA6NER3 117 aa11.92□□□□□ -0.5
H3F3B-207ENST00000589417 EVI2AP22794 236 aa11.92□□□□□ -0.5
H3F3B-207ENST00000589417 CACNG7P62955 275 aa11.92□□□□□ -0.5
H3F3B-207ENST00000589417 TNP2Q05952 138 aa11.92□□□□□ -0.5
H3F3B-207ENST00000589417 GAGE1Q13065 139 aa11.92□□□□□ -0.5
H3F3B-207ENST00000589417 GAGE4Q13068 117 aa11.92□□□□□ -0.5
H3F3B-207ENST00000589417 GAGE5Q13069 117 aa11.92□□□□□ -0.5
H3F3B-207ENST00000589417 GAGE13Q4V321 117 aa11.92□□□□□ -0.5
H3F3B-207ENST00000589417 LINC01556Q5JQF7 62 aa11.92□□□□□ -0.5
H3F3B-207ENST00000589417 Q6ZRN7 208 aaPredicted RBP11.92□□□□□ -0.5
H3F3B-207ENST00000589417 OR10G8Q8NGN5 311 aa11.92□□□□□ -0.5
H3F3B-207ENST00000589417 EIF5A2Q9GZV4 153 aaKnown RBP11.92□□□□□ -0.5
H3F3B-207ENST00000589417 DYNC1H1Q14204 4646 aaKnown RBP11.91□□□□□ -0.5
H3F3B-207ENST00000589417 TRAV8-6A0A0B4J262 113 aa11.91□□□□□ -0.5
H3F3B-207ENST00000589417 IGHV3-38A0A0C4DH36 116 aa11.91□□□□□ -0.5
H3F3B-207ENST00000589417 GZMBP10144 247 aa11.91□□□□□ -0.5
H3F3B-207ENST00000589417 LINC00315P59091 139 aa11.91□□□□□ -0.5
H3F3B-207ENST00000589417 FAM231DQ6ZW35 169 aa11.91□□□□□ -0.5
H3F3B-207ENST00000589417 C10orf126Q8N4M7 172 aa11.91□□□□□ -0.5
H3F3B-207ENST00000589417 CNFNQ9BYD5 112 aa11.91□□□□□ -0.5
H3F3B-207ENST00000589417 A0A087WWC5 75 aa11.9□□□□□ -0.5
H3F3B-207ENST00000589417 SRP19P09132 144 aaKnown RBP11.9□□□□□ -0.5
H3F3B-207ENST00000589417 TRBV7-3A0A075B6L6 115 aa11.89□□□□□ -0.51
H3F3B-207ENST00000589417 MUC21A0A0G2JKD1 596 aa11.89□□□□□ -0.51
H3F3B-207ENST00000589417 MUC21A0A140T8X8 626 aa11.89□□□□□ -0.51
H3F3B-207ENST00000589417 NFE4Q86UQ8 179 aa11.89□□□□□ -0.51
H3F3B-207ENST00000589417 AP1S3Q96PC3 154 aa11.89□□□□□ -0.51
H3F3B-207ENST00000589417 RPP21Q9H633 154 aaKnown RBP11.89□□□□□ -0.51
H3F3B-207ENST00000589417 CTRLP40313 264 aa11.88□□□□□ -0.51
H3F3B-207ENST00000589417 UBE2D3P61077 147 aa11.88□□□□□ -0.51
H3F3B-207ENST00000589417 UBE2D2P62837 147 aa11.88□□□□□ -0.51
H3F3B-207ENST00000589417 RPL36AP83881 106 aaKnown RBP11.88□□□□□ -0.51
H3F3B-207ENST00000589417 OR10J3Q5JRS4 329 aa11.88□□□□□ -0.51
H3F3B-207ENST00000589417 RPL36ALQ969Q0 106 aaKnown RBP11.88□□□□□ -0.51
H3F3B-207ENST00000589417 RNASE7Q9H1E1 156 aaKnown RBP11.88□□□□□ -0.51
H3F3B-207ENST00000589417 SMDT1Q9H4I9 107 aa11.88□□□□□ -0.51
H3F3B-207ENST00000589417 CT83Q5H943 113 aa11.87□□□□□ -0.51
H3F3B-207ENST00000589417 LYZL1Q6UWQ5 148 aa11.87□□□□□ -0.51
H3F3B-207ENST00000589417 SMIM7Q9BQ49 75 aa11.87□□□□□ -0.51
H3F3B-207ENST00000589417 SMIM17P0DL12 118 aa11.86□□□□□ -0.51
H3F3B-207ENST00000589417 FOXA3P55318 350 aaPredicted RBP11.86□□□□□ -0.51
H3F3B-207ENST00000589417 LINC01551Q86U37 167 aa11.86□□□□□ -0.51
H3F3B-207ENST00000589417 MSRB1Q9NZV6 116 aa11.86□□□□□ -0.51
H3F3B-207ENST00000589417 IBA57-AS1B1ANH7 110 aa11.85□□□□□ -0.51
H3F3B-207ENST00000589417 NTF3P20783 257 aa11.85□□□□□ -0.51
H3F3B-207ENST00000589417 ZNF56Q15929 161 aa11.85□□□□□ -0.51
H3F3B-207ENST00000589417 FAM74A3Q4VXF1 159 aa11.85□□□□□ -0.51
H3F3B-207ENST00000589417 NEXN-AS1Q8NBZ9 246 aa11.85□□□□□ -0.51
H3F3B-207ENST00000589417 TPPP3Q9BW30 176 aa11.85□□□□□ -0.51
H3F3B-207ENST00000589417 ZNF727A8MUV8 499 aa11.84□□□□□ -0.51
H3F3B-207ENST00000589417 TRGC1P0CF51 173 aa11.84□□□□□ -0.51
H3F3B-207ENST00000589417 CEBPGP53567 150 aa11.84□□□□□ -0.51
H3F3B-207ENST00000589417 GTSF1Q8WW33 167 aa11.84□□□□□ -0.51
H3F3B-207ENST00000589417 TNFRSF18Q9Y5U5 241 aa11.84□□□□□ -0.51
H3F3B-207ENST00000589417 A8MWL6 223 aa11.83□□□□□ -0.52
H3F3B-207ENST00000589417 M0QY20 66 aa11.83□□□□□ -0.52
H3F3B-207ENST00000589417 GATCO43716 136 aaKnown RBP11.83□□□□□ -0.52
H3F3B-207ENST00000589417 SSTP61278 116 aa11.83□□□□□ -0.52
H3F3B-207ENST00000589417 OSTCQ9NRP0 149 aa11.83□□□□□ -0.52
H3F3B-207ENST00000589417 FAM231BA6NCW3 169 aa11.82□□□□□ -0.52
H3F3B-207ENST00000589417 C9JQL5 133 aa11.82□□□□□ -0.52
H3F3B-207ENST00000589417 F5H697 171 aa11.82□□□□□ -0.52
H3F3B-207ENST00000589417 ERVFC1-1P60608 527 aa11.82□□□□□ -0.52
H3F3B-207ENST00000589417 LAGE3Q14657 143 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms