RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	COX8C	Q7Z4L0	72 aa		11.59	□□□□□ -0.55
DDX39A-209	ENST00000589318	C16orf92	Q96LL3	132 aa		11.59	□□□□□ -0.55
DDX39A-209	ENST00000589318	C8orf49	Q96NF6	230 aa		11.59	□□□□□ -0.55
DDX39A-209	ENST00000589318	PRO0461	Q9UI25	63 aa		11.59	□□□□□ -0.55
DDX39A-209	ENST00000589318	SETX	Q7Z333	2677 aa	Known RBP	11.59	□□□□□ -0.55
DDX39A-209	ENST00000589318	RBAKDN	A6NC62	111 aa		11.58	□□□□□ -0.55
DDX39A-209	ENST00000589318		D6R8Y8	96 aa		11.58	□□□□□ -0.55
DDX39A-209	ENST00000589318	ATP5L	O75964	103 aa		11.58	□□□□□ -0.55
DDX39A-209	ENST00000589318	CRIP1	P50238	77 aa		11.58	□□□□□ -0.55
DDX39A-209	ENST00000589318	SLURP1	P55000	103 aa		11.58	□□□□□ -0.55
DDX39A-209	ENST00000589318		Q8TAT8	98 aa		11.58	□□□□□ -0.55
DDX39A-209	ENST00000589318	ERG28	Q9UKR5	140 aa		11.58	□□□□□ -0.55
DDX39A-209	ENST00000589318	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.58	□□□□□ -0.56
DDX39A-209	ENST00000589318	TRBV25-1	A0A075B6N4	114 aa		11.58	□□□□□ -0.56
DDX39A-209	ENST00000589318	ERCC8	Q13216	396 aa		11.58	□□□□□ -0.56
DDX39A-209	ENST00000589318	PRR31	Q5SQ13	230 aa		11.58	□□□□□ -0.56
DDX39A-209	ENST00000589318	KLHL30-AS1	Q8NEE0	82 aa		11.58	□□□□□ -0.56
DDX39A-209	ENST00000589318	PRR25	Q96S07	402 aa		11.58	□□□□□ -0.56
DDX39A-209	ENST00000589318	C1QTNF4	Q9BXJ3	329 aa		11.58	□□□□□ -0.56
DDX39A-209	ENST00000589318		H3BMG7	143 aa		11.57	□□□□□ -0.56
DDX39A-209	ENST00000589318	APOM	O95445	188 aa		11.57	□□□□□ -0.56
DDX39A-209	ENST00000589318	IGKC	P01834	107 aa		11.57	□□□□□ -0.56
DDX39A-209	ENST00000589318	CD28	P10747	220 aa		11.57	□□□□□ -0.56
DDX39A-209	ENST00000589318	FOXI1	Q12951	378 aa		11.57	□□□□□ -0.56
DDX39A-209	ENST00000589318	RRN3P1	Q2M238	152 aa		11.57	□□□□□ -0.56
DDX39A-209	ENST00000589318	KHDC1L	Q5JSQ8	128 aa		11.57	□□□□□ -0.56
DDX39A-209	ENST00000589318	DUX3	Q96PT4	197 aa		11.57	□□□□□ -0.56
DDX39A-209	ENST00000589318		A0A1B0GWB2	263 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	NDUFA7	O95182	113 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	SPINK8	P0C7L1	97 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	TWIST1	Q15672	202 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	C12orf74	Q32Q52	190 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	SPANXA1	Q9NS26	97 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	HHLA3	Q9XRX5	114 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	IGKV3-7	A0A075B6H7	116 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	RPL11	P62913	178 aa	Known RBP	11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	SH2D6	Q7Z4S9	175 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	C11orf44	Q8N8P7	122 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	DCANP1	Q8TF63	244 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	AGPAT4-IT1	Q9H0P7	198 aa		11.56	□□□□□ -0.56
DDX39A-209	ENST00000589318	LOC389332	A0A1B0GUA5	103 aa		11.55	□□□□□ -0.56
DDX39A-209	ENST00000589318	ODF1	Q14990	250 aa		11.55	□□□□□ -0.56
DDX39A-209	ENST00000589318		K7ERJ3	54 aa		11.54	□□□□□ -0.56
DDX39A-209	ENST00000589318	DPM2	O94777	84 aa		11.54	□□□□□ -0.56
DDX39A-209	ENST00000589318	FCER1G	P30273	86 aa		11.54	□□□□□ -0.56
DDX39A-209	ENST00000589318	LYRM7	Q5U5X0	104 aa		11.54	□□□□□ -0.56
DDX39A-209	ENST00000589318	C9orf47	Q6ZRZ4	202 aa		11.54	□□□□□ -0.56
DDX39A-209	ENST00000589318	C18orf15	Q96N68	181 aa		11.54	□□□□□ -0.56
DDX39A-209	ENST00000589318	DKK2	Q9UBU2	259 aa		11.54	□□□□□ -0.56
DDX39A-209	ENST00000589318	ZNF80	P51504	273 aa	Predicted RBP	11.54	□□□□□ -0.56
DDX39A-209	ENST00000589318	CITED2	Q99967	270 aa	Predicted RBP	11.54	□□□□□ -0.56
DDX39A-209	ENST00000589318	MAP1LC3A	Q9H492	121 aa		11.54	□□□□□ -0.56
DDX39A-209	ENST00000589318	NXT2	Q9NPJ8	142 aa	Known RBP	11.54	□□□□□ -0.56
DDX39A-209	ENST00000589318	PROK1	P58294	105 aa		11.53	□□□□□ -0.56
DDX39A-209	ENST00000589318	DEFB1	P60022	68 aa		11.53	□□□□□ -0.56
DDX39A-209	ENST00000589318	GAGE5	Q13069	117 aa		11.53	□□□□□ -0.56
DDX39A-209	ENST00000589318	GAGE6	Q13070	117 aa		11.53	□□□□□ -0.56
DDX39A-209	ENST00000589318	FHL3	Q13643	280 aa		11.53	□□□□□ -0.56
DDX39A-209	ENST00000589318	MRPL51	Q4U2R6	128 aa	Known RBP	11.53	□□□□□ -0.56
DDX39A-209	ENST00000589318	DLX4	Q92988	240 aa	Predicted RBP	11.53	□□□□□ -0.56
DDX39A-209	ENST00000589318	RAX2	Q96IS3	184 aa		11.53	□□□□□ -0.56
DDX39A-209	ENST00000589318	CDIP1	Q9H305	208 aa		11.53	□□□□□ -0.56
DDX39A-209	ENST00000589318	CKS2	P33552	79 aa		11.52	□□□□□ -0.56
DDX39A-209	ENST00000589318	SRSF2	Q01130	221 aa	Known RBP	11.52	□□□□□ -0.56
DDX39A-209	ENST00000589318	SYT8	Q8NBV8	401 aa		11.52	□□□□□ -0.56
DDX39A-209	ENST00000589318	SH2D1A	O60880	128 aa		11.52	□□□□□ -0.57
DDX39A-209	ENST00000589318	TCTA	P57738	103 aa		11.52	□□□□□ -0.57
DDX39A-209	ENST00000589318	TMEM158	Q8WZ71	300 aa		11.52	□□□□□ -0.57
DDX39A-209	ENST00000589318	PGPEP1	Q9NXJ5	209 aa		11.52	□□□□□ -0.57
DDX39A-209	ENST00000589318	IGKV2D-26	A0A0A0MRZ7	120 aa		11.51	□□□□□ -0.57
DDX39A-209	ENST00000589318		A0A1W2PRX2	142 aa		11.51	□□□□□ -0.57
DDX39A-209	ENST00000589318	TMEM262	E9PQX1	116 aa		11.51	□□□□□ -0.57
DDX39A-209	ENST00000589318	TMEM78	Q5T7P6	136 aa		11.51	□□□□□ -0.57
DDX39A-209	ENST00000589318		Q6ZUT4	128 aa		11.51	□□□□□ -0.57
DDX39A-209	ENST00000589318	CRLF1	O75462	422 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	AMN1	Q8IY45	258 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	PPDPFL	Q8WWR9	84 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	BAHCC1	Q9P281	2608 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	F8	P00451	2351 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318		F6UB75	175 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318		K7EQG2	157 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	OVOL1	O14753	267 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	PRSS1	P07477	247 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	CFAP126	Q5VTH2	177 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	LYZL1	Q6UWQ5	148 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	ZNF575	Q86XF7	245 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	WFDC3	Q8IUB2	231 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	C20orf78	Q9BR46	151 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	PEMT	Q9UBM1	199 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	C2CD3	Q4AC94	2353 aa		11.5	□□□□□ -0.57
DDX39A-209	ENST00000589318	ADARB2-AS1	A8MUL3	147 aa		11.49	□□□□□ -0.57
DDX39A-209	ENST00000589318	HIST1H4G	Q99525	98 aa		11.49	□□□□□ -0.57
DDX39A-209	ENST00000589318	CCL24	O00175	119 aa		11.48	□□□□□ -0.57
DDX39A-209	ENST00000589318	ZC2HC1B	Q5TFG8	222 aa		11.48	□□□□□ -0.57
DDX39A-209	ENST00000589318	ANAPC13	Q9BS18	74 aa		11.48	□□□□□ -0.57
DDX39A-209	ENST00000589318	LENEP	Q9Y5L5	61 aa		11.48	□□□□□ -0.57
DDX39A-209	ENST00000589318	WNK1	Q9H4A3	2382 aa		11.48	□□□□□ -0.57
DDX39A-209	ENST00000589318	NPY	P01303	97 aa		11.48	□□□□□ -0.57
DDX39A-209	ENST00000589318	PLN	P26678	52 aa		11.48	□□□□□ -0.57
DDX39A-209	ENST00000589318	ID1	P41134	155 aa		11.48	□□□□□ -0.57

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