RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 ZNF56Q15929 161 aa8.28□□□□□ -1.08
SDHDP1-201ENST00000588055 SACSQ9NZJ4 4579 aa8.28□□□□□ -1.08
SDHDP1-201ENST00000588055 A0A096LPF7 62 aa8.27□□□□□ -1.09
SDHDP1-201ENST00000588055 MUC21A0A0G2JKD1 596 aa8.27□□□□□ -1.09
SDHDP1-201ENST00000588055 MUC21A0A140T8X8 626 aa8.27□□□□□ -1.09
SDHDP1-201ENST00000588055 C9JQL5 133 aa8.27□□□□□ -1.09
SDHDP1-201ENST00000588055 TRGC1P0CF51 173 aa8.27□□□□□ -1.09
SDHDP1-201ENST00000588055 CTRLP40313 264 aa8.27□□□□□ -1.09
SDHDP1-201ENST00000588055 NEGR1Q7Z3B1 354 aa8.27□□□□□ -1.09
SDHDP1-201ENST00000588055 SLC25A29Q8N8R3 303 aa8.27□□□□□ -1.09
SDHDP1-201ENST00000588055 ISOC2Q96AB3 205 aa8.27□□□□□ -1.09
SDHDP1-201ENST00000588055 OSTCQ9NRP0 149 aa8.27□□□□□ -1.09
SDHDP1-201ENST00000588055 RPL23P62829 140 aaKnown RBP8.26□□□□□ -1.09
SDHDP1-201ENST00000588055 UQCC3Q6UW78 93 aa8.26□□□□□ -1.09
SDHDP1-201ENST00000588055 LYZL1Q6UWQ5 148 aa8.26□□□□□ -1.09
SDHDP1-201ENST00000588055 SMIM15Q7Z3B0 74 aa8.26□□□□□ -1.09
SDHDP1-201ENST00000588055 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
SDHDP1-201ENST00000588055 JPT2Q9H910 190 aa8.26□□□□□ -1.09
SDHDP1-201ENST00000588055 NACAE9PAV3 2078 aa8.26□□□□□ -1.09
SDHDP1-201ENST00000588055 RYR2Q92736 4967 aa8.25□□□□□ -1.09
SDHDP1-201ENST00000588055 F5H697 171 aa8.25□□□□□ -1.09
SDHDP1-201ENST00000588055 MGPP08493 103 aa8.25□□□□□ -1.09
SDHDP1-201ENST00000588055 PNRC1Q12796 327 aaPredicted RBP8.25□□□□□ -1.09
SDHDP1-201ENST00000588055 TWIST1Q15672 202 aa8.25□□□□□ -1.09
SDHDP1-201ENST00000588055 OR10G8Q8NGN5 311 aa8.25□□□□□ -1.09
SDHDP1-201ENST00000588055 TSKUQ8WUA8 353 aa8.25□□□□□ -1.09
SDHDP1-201ENST00000588055 SAMD10Q9BYL1 202 aa8.25□□□□□ -1.09
SDHDP1-201ENST00000588055 GFRA4Q9GZZ7 299 aa8.25□□□□□ -1.09
SDHDP1-201ENST00000588055 DNAH1Q9P2D7 4330 aa8.25□□□□□ -1.09
SDHDP1-201ENST00000588055 RAB4BP61018 213 aa8.24□□□□□ -1.09
SDHDP1-201ENST00000588055 UFSP1Q6NVU6 142 aa8.24□□□□□ -1.09
SDHDP1-201ENST00000588055 WDR73Q6P4I2 378 aa8.24□□□□□ -1.09
SDHDP1-201ENST00000588055 COMMD7Q86VX2 200 aa8.24□□□□□ -1.09
SDHDP1-201ENST00000588055 C14orf178Q8N769 122 aaPredicted RBP8.24□□□□□ -1.09
SDHDP1-201ENST00000588055 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.24□□□□□ -1.09
SDHDP1-201ENST00000588055 MRPS16Q9Y3D3 137 aaKnown RBP8.24□□□□□ -1.09
SDHDP1-201ENST00000588055 LINC00588Q9Y4M8 146 aa8.24□□□□□ -1.09
SDHDP1-201ENST00000588055 RYR3Q15413 4870 aa8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 TRBV10-1A0A0K0K1A3 114 aa8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 LOC100131303A0A0U1RQF7 123 aa8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 FAM231BA6NCW3 169 aa8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 HIGD1CA8MV81 97 aa8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 H7C1H1 209 aa8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 CRYGDP07320 174 aa8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 NTF3P20783 257 aa8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 RPL36AP83881 106 aaKnown RBP8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 RPL36ALQ969Q0 106 aaKnown RBP8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 PGLYRP4Q96LB8 373 aa8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 CNFNQ9BYD5 112 aa8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 DPH3P1Q9H4G8 78 aa8.23□□□□□ -1.09
SDHDP1-201ENST00000588055 GAGE12JA6NER3 117 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 PPP1R2P9O14990 202 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 GAGE1Q13065 139 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 GAGE4Q13068 117 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 GAGE5Q13069 117 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 ESRGQ1W209 222 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 GAGE13Q4V321 117 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 TTC32Q5I0X7 151 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 GTSF1Q8WW33 167 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 UPK3BQ9BT76 320 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 NAT8BQ9UHF3 227 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 V9GYV3 84 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 HYDINQ4G0P3 5121 aa8.22□□□□□ -1.09
SDHDP1-201ENST00000588055 IGLV2-18A0A075B6J9 118 aa8.21□□□□□ -1.1
SDHDP1-201ENST00000588055 A0A1B0GUT8 65 aa8.21□□□□□ -1.1
SDHDP1-201ENST00000588055 F8W036 122 aa8.21□□□□□ -1.1
SDHDP1-201ENST00000588055 ATP6V0E2Q8NHE4 81 aa8.21□□□□□ -1.1
SDHDP1-201ENST00000588055 TRAV8-6A0A0B4J262 113 aa8.2□□□□□ -1.1
SDHDP1-201ENST00000588055 EVI2AP22794 236 aa8.2□□□□□ -1.1
SDHDP1-201ENST00000588055 TIRAPP58753 221 aa8.2□□□□□ -1.1
SDHDP1-201ENST00000588055 LYPD5Q6UWN5 251 aa8.2□□□□□ -1.1
SDHDP1-201ENST00000588055 Q6ZSN1 163 aa8.2□□□□□ -1.1
SDHDP1-201ENST00000588055 ZNRF2Q8NHG8 242 aa8.2□□□□□ -1.1
SDHDP1-201ENST00000588055 Q9H8V8 135 aa8.2□□□□□ -1.1
SDHDP1-201ENST00000588055 MSRB1Q9NZV6 116 aa8.2□□□□□ -1.1
SDHDP1-201ENST00000588055 VPS13DQ5THJ4 4388 aa8.19□□□□□ -1.1
SDHDP1-201ENST00000588055 TRBV7-3A0A075B6L6 115 aa8.19□□□□□ -1.1
SDHDP1-201ENST00000588055 TMEM218A2RU14 115 aa8.19□□□□□ -1.1
SDHDP1-201ENST00000588055 SIVA1O15304 175 aa8.19□□□□□ -1.1
SDHDP1-201ENST00000588055 MT-ND4LP03901 98 aa8.19□□□□□ -1.1
SDHDP1-201ENST00000588055 FOXA3P55318 350 aaPredicted RBP8.19□□□□□ -1.1
SDHDP1-201ENST00000588055 RIGQ13278 110 aa8.19□□□□□ -1.1
SDHDP1-201ENST00000588055 OR10J3Q5JRS4 329 aa8.19□□□□□ -1.1
SDHDP1-201ENST00000588055 GTSF1LQ9H1H1 148 aa8.19□□□□□ -1.1
SDHDP1-201ENST00000588055 A0A087WWC5 75 aa8.18□□□□□ -1.1
SDHDP1-201ENST00000588055 LINC00862A6NCI5 91 aa8.18□□□□□ -1.1
SDHDP1-201ENST00000588055 M0R2N4 97 aa8.18□□□□□ -1.1
SDHDP1-201ENST00000588055 SUMO4Q6EEV6 95 aa8.18□□□□□ -1.1
SDHDP1-201ENST00000588055 NUP35Q8NFH5 326 aa8.18□□□□□ -1.1
SDHDP1-201ENST00000588055 ANAPC16Q96DE5 110 aa8.18□□□□□ -1.1
SDHDP1-201ENST00000588055 TNFRSF18Q9Y5U5 241 aa8.18□□□□□ -1.1
SDHDP1-201ENST00000588055 KIF25-AS1Q9Y6Z4 181 aa8.18□□□□□ -1.1
SDHDP1-201ENST00000588055 TRAV9-2A0A087WT02 112 aa8.17□□□□□ -1.1
SDHDP1-201ENST00000588055 NBDYA0A0U1RRE5 68 aa8.17□□□□□ -1.1
SDHDP1-201ENST00000588055 A0A1B0GW15 77 aa8.17□□□□□ -1.1
SDHDP1-201ENST00000588055 SMIM27A0A1W2PRY6 76 aa8.17□□□□□ -1.1
SDHDP1-201ENST00000588055 S100A8P05109 93 aa8.17□□□□□ -1.1
SDHDP1-201ENST00000588055 LINC00694P0DN24 101 aa8.17□□□□□ -1.1
SDHDP1-201ENST00000588055 LELP1Q5T871 98 aa8.17□□□□□ -1.1
SDHDP1-201ENST00000588055 NEXN-AS1Q8NBZ9 246 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms