RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 LELP1Q5T871 98 aa13.5□□□□□ -0.25
TRAPPC6A-203ENST00000587818 DERL1Q9BUN8 251 aa13.5□□□□□ -0.25
TRAPPC6A-203ENST00000587818 KRTAP4-5Q9BYR2 181 aa13.5□□□□□ -0.25
TRAPPC6A-203ENST00000587818 APOBP04114 4563 aaKnown RBP13.49□□□□□ -0.25
TRAPPC6A-203ENST00000587818 hCG_2014768A0A024R1R8 64 aa13.49□□□□□ -0.25
TRAPPC6A-203ENST00000587818 MUC21A0A0G2JKD1 596 aa13.49□□□□□ -0.25
TRAPPC6A-203ENST00000587818 MUC21A0A140T8X8 626 aa13.49□□□□□ -0.25
TRAPPC6A-203ENST00000587818 RPL35P42766 123 aaKnown RBP13.49□□□□□ -0.25
TRAPPC6A-203ENST00000587818 ERVFC1-1P60608 527 aa13.49□□□□□ -0.25
TRAPPC6A-203ENST00000587818 SSTP61278 116 aa13.49□□□□□ -0.25
TRAPPC6A-203ENST00000587818 Q8N3U1 123 aa13.49□□□□□ -0.25
TRAPPC6A-203ENST00000587818 A0A087WTM6 91 aa13.48□□□□□ -0.25
TRAPPC6A-203ENST00000587818 TRAV1-1A0A0B4J248 108 aa13.48□□□□□ -0.25
TRAPPC6A-203ENST00000587818 K7EP13 123 aa13.48□□□□□ -0.25
TRAPPC6A-203ENST00000587818 SULT1A2P50226 295 aa13.48□□□□□ -0.25
TRAPPC6A-203ENST00000587818 LINC01556Q5JQF7 62 aa13.48□□□□□ -0.25
TRAPPC6A-203ENST00000587818 EIF5AL1Q6IS14 154 aaKnown RBP13.48□□□□□ -0.25
TRAPPC6A-203ENST00000587818 ABCA13Q86UQ4 5058 aa13.47□□□□□ -0.25
TRAPPC6A-203ENST00000587818 EREGO14944 169 aa13.47□□□□□ -0.25
TRAPPC6A-203ENST00000587818 C1QBP02746 253 aa13.47□□□□□ -0.25
TRAPPC6A-203ENST00000587818 LINC00694P0DN24 101 aa13.47□□□□□ -0.25
TRAPPC6A-203ENST00000587818 RAB5CP51148 216 aa13.47□□□□□ -0.25
TRAPPC6A-203ENST00000587818 ZFP82Q8N141 532 aa13.47□□□□□ -0.25
TRAPPC6A-203ENST00000587818 C10orf126Q8N4M7 172 aa13.47□□□□□ -0.25
TRAPPC6A-203ENST00000587818 Q9HAA7 133 aa13.47□□□□□ -0.25
TRAPPC6A-203ENST00000587818 MANBALQ9NQG1 85 aa13.47□□□□□ -0.25
TRAPPC6A-203ENST00000587818 RAB19A4D1S5 217 aa13.46□□□□□ -0.25
TRAPPC6A-203ENST00000587818 IBA57-AS1B1ANH7 110 aa13.46□□□□□ -0.25
TRAPPC6A-203ENST00000587818 RHODO00212 210 aa13.46□□□□□ -0.25
TRAPPC6A-203ENST00000587818 CDK2AP2O75956 126 aa13.46□□□□□ -0.25
TRAPPC6A-203ENST00000587818 OR10AG1Q8NH19 301 aa13.46□□□□□ -0.25
TRAPPC6A-203ENST00000587818 SLC51BQ86UW2 128 aa13.45□□□□□ -0.26
TRAPPC6A-203ENST00000587818 PGPEP1Q9NXJ5 209 aa13.45□□□□□ -0.26
TRAPPC6A-203ENST00000587818 C11orf52Q96A22 123 aa13.44□□□□□ -0.26
TRAPPC6A-203ENST00000587818 TEX46H3BTG2 121 aa13.43□□□□□ -0.26
TRAPPC6A-203ENST00000587818 IGLV2-8P01709 118 aa13.43□□□□□ -0.26
TRAPPC6A-203ENST00000587818 CENPWQ5EE01 88 aa13.43□□□□□ -0.26
TRAPPC6A-203ENST00000587818 PSCAO43653 123 aa13.42□□□□□ -0.26
TRAPPC6A-203ENST00000587818 GZMBP10144 247 aa13.42□□□□□ -0.26
TRAPPC6A-203ENST00000587818 MAPKAPK5-AS1Q8N8E1 139 aa13.42□□□□□ -0.26
TRAPPC6A-203ENST00000587818 SSBP4Q9BWG4 385 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC6A-203ENST00000587818 MED9Q9NWA0 146 aa13.42□□□□□ -0.26
TRAPPC6A-203ENST00000587818 SNAI2O43623 268 aa13.41□□□□□ -0.26
TRAPPC6A-203ENST00000587818 DAZ4Q86SG3 579 aaKnown RBP13.41□□□□□ -0.26
TRAPPC6A-203ENST00000587818 AKAP14Q86UN6 197 aa13.41□□□□□ -0.26
TRAPPC6A-203ENST00000587818 DAZ3Q9NR90 486 aaKnown RBP13.41□□□□□ -0.26
TRAPPC6A-203ENST00000587818 CXCL1P09341 107 aa13.4□□□□□ -0.26
TRAPPC6A-203ENST00000587818 MEF2BQ02080 365 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC6A-203ENST00000587818 SPANXN1Q5VSR9 72 aa13.4□□□□□ -0.26
TRAPPC6A-203ENST00000587818 C9orf62Q8N4C0 152 aa13.4□□□□□ -0.26
TRAPPC6A-203ENST00000587818 LRCOL1A6NCL2 159 aa13.39□□□□□ -0.27
TRAPPC6A-203ENST00000587818 RBFOX3A6NFN3 312 aa13.39□□□□□ -0.27
TRAPPC6A-203ENST00000587818 IFNA1P01562 189 aa13.39□□□□□ -0.27
TRAPPC6A-203ENST00000587818 ZNF56Q15929 161 aa13.39□□□□□ -0.27
TRAPPC6A-203ENST00000587818 DAZAP1Q96EP5 407 aaKnown RBP13.39□□□□□ -0.27
TRAPPC6A-203ENST00000587818 BOLA1Q9Y3E2 137 aa13.39□□□□□ -0.27
TRAPPC6A-203ENST00000587818 OR5AL1P0C617 328 aa13.38□□□□□ -0.27
TRAPPC6A-203ENST00000587818 BCL2P10415 239 aa13.38□□□□□ -0.27
TRAPPC6A-203ENST00000587818 GNG4P50150 75 aa13.38□□□□□ -0.27
TRAPPC6A-203ENST00000587818 KRTAP10-1P60331 282 aa13.38□□□□□ -0.27
TRAPPC6A-203ENST00000587818 RAB4BP61018 213 aa13.38□□□□□ -0.27
TRAPPC6A-203ENST00000587818 RPL36AP83881 106 aaKnown RBP13.38□□□□□ -0.27
TRAPPC6A-203ENST00000587818 OR2D3Q8NGH3 330 aa13.38□□□□□ -0.27
TRAPPC6A-203ENST00000587818 RPL36ALQ969Q0 106 aaKnown RBP13.38□□□□□ -0.27
TRAPPC6A-203ENST00000587818 TPPP3Q9BW30 176 aa13.38□□□□□ -0.27
TRAPPC6A-203ENST00000587818 A0A087WWC5 75 aa13.37□□□□□ -0.27
TRAPPC6A-203ENST00000587818 F5H697 171 aa13.37□□□□□ -0.27
TRAPPC6A-203ENST00000587818 UBE2D3P61077 147 aa13.37□□□□□ -0.27
TRAPPC6A-203ENST00000587818 UBE2D2P62837 147 aa13.37□□□□□ -0.27
TRAPPC6A-203ENST00000587818 VAX2Q9UIW0 290 aa13.37□□□□□ -0.27
TRAPPC6A-203ENST00000587818 TRBV20OR9-2A0A075B6H5 130 aa13.36□□□□□ -0.27
TRAPPC6A-203ENST00000587818 TRBV7-3A0A075B6L6 115 aa13.36□□□□□ -0.27
TRAPPC6A-203ENST00000587818 TRBV10-1A0A0K0K1A3 114 aa13.36□□□□□ -0.27
TRAPPC6A-203ENST00000587818 C19orf71A6NCJ1 209 aa13.36□□□□□ -0.27
TRAPPC6A-203ENST00000587818 PDE6DO43924 150 aa13.36□□□□□ -0.27
TRAPPC6A-203ENST00000587818 DNAJC30Q96LL9 226 aa13.36□□□□□ -0.27
TRAPPC6A-203ENST00000587818 CDPF1Q6NVV7 123 aa13.35□□□□□ -0.27
TRAPPC6A-203ENST00000587818 ALKAL2Q6UX46 152 aa13.35□□□□□ -0.27
TRAPPC6A-203ENST00000587818 NIT1Q86X76 327 aa13.35□□□□□ -0.27
TRAPPC6A-203ENST00000587818 NEXN-AS1Q8NBZ9 246 aa13.35□□□□□ -0.27
TRAPPC6A-203ENST00000587818 KIF25-AS1Q9Y6Z4 181 aa13.35□□□□□ -0.27
TRAPPC6A-203ENST00000587818 OR10G8Q8NGN5 311 aa13.34□□□□□ -0.27
TRAPPC6A-203ENST00000587818 IGLC6P0CF74 106 aa13.33□□□□□ -0.28
TRAPPC6A-203ENST00000587818 RPS20P60866 119 aaKnown RBP13.33□□□□□ -0.28
TRAPPC6A-203ENST00000587818 WFDC2Q14508 124 aa13.33□□□□□ -0.28
TRAPPC6A-203ENST00000587818 Q8N1X5 172 aa13.33□□□□□ -0.28
TRAPPC6A-203ENST00000587818 FER1L6-AS1Q8NA97 138 aa13.33□□□□□ -0.28
TRAPPC6A-203ENST00000587818 KLK12Q9UKR0 248 aa13.33□□□□□ -0.28
TRAPPC6A-203ENST00000587818 URGCP-MRPS24S4R325 110 aa13.33□□□□□ -0.28
TRAPPC6A-203ENST00000587818 A0A1B0GVG6 124 aa13.32□□□□□ -0.28
TRAPPC6A-203ENST00000587818 P01737 135 aa13.32□□□□□ -0.28
TRAPPC6A-203ENST00000587818 SMIM17P0DL12 118 aa13.32□□□□□ -0.28
TRAPPC6A-203ENST00000587818 GCSHP23434 173 aa13.32□□□□□ -0.28
TRAPPC6A-203ENST00000587818 NKX2-5P52952 324 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC6A-203ENST00000587818 XGP55808 180 aa13.32□□□□□ -0.28
TRAPPC6A-203ENST00000587818 LAGE3Q14657 143 aa13.32□□□□□ -0.28
TRAPPC6A-203ENST00000587818 TM2D2Q9BX73 214 aa13.32□□□□□ -0.28
TRAPPC6A-203ENST00000587818 TRAV8-3A0A0A6YYJ7 113 aa13.31□□□□□ -0.28
TRAPPC6A-203ENST00000587818 TMEM262E9PQX1 116 aa13.31□□□□□ -0.28
TRAPPC6A-203ENST00000587818 LECT2O14960 151 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms