RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 A4D1N5 150 aa12.34□□□□□ -0.43
RANBP3-209ENST00000587411 SDHAF1A6NFY7 115 aa12.34□□□□□ -0.43
RANBP3-209ENST00000587411 C9JAW5 83 aa12.34□□□□□ -0.43
RANBP3-209ENST00000587411 IGHV1-69P01742 117 aa12.34□□□□□ -0.43
RANBP3-209ENST00000587411 DEFB1P60022 68 aa12.34□□□□□ -0.43
RANBP3-209ENST00000587411 MOB4Q9Y3A3 225 aa12.34□□□□□ -0.43
RANBP3-209ENST00000587411 NPFFO15130 113 aa12.34□□□□□ -0.43
RANBP3-209ENST00000587411 FAM159AQ6UWV7 190 aa12.34□□□□□ -0.43
RANBP3-209ENST00000587411 TMEM263Q8WUH6 116 aaKnown RBP12.34□□□□□ -0.43
RANBP3-209ENST00000587411 LGALS9O00182 355 aa12.33□□□□□ -0.44
RANBP3-209ENST00000587411 SRD5A1P18405 259 aa12.33□□□□□ -0.44
RANBP3-209ENST00000587411 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.33□□□□□ -0.44
RANBP3-209ENST00000587411 KLLNB2CW77 178 aa12.33□□□□□ -0.44
RANBP3-209ENST00000587411 F5H697 171 aa12.33□□□□□ -0.44
RANBP3-209ENST00000587411 F6UB75 175 aa12.33□□□□□ -0.44
RANBP3-209ENST00000587411 RPL11P62913 178 aaKnown RBP12.33□□□□□ -0.44
RANBP3-209ENST00000587411 RHOHQ15669 191 aa12.33□□□□□ -0.44
RANBP3-209ENST00000587411 RAX2Q96IS3 184 aa12.33□□□□□ -0.44
RANBP3-209ENST00000587411 TACC2O95359 2948 aa12.32□□□□□ -0.44
RANBP3-209ENST00000587411 TMEM223A0PJW6 202 aa12.32□□□□□ -0.44
RANBP3-209ENST00000587411 LINC01600Q96MT4 127 aa12.32□□□□□ -0.44
RANBP3-209ENST00000587411 NSUN5P1Q3KNT7 163 aa12.32□□□□□ -0.44
RANBP3-209ENST00000587411 SPTBN2O15020 2390 aa12.32□□□□□ -0.44
RANBP3-209ENST00000587411 CCL21O00585 134 aa12.31□□□□□ -0.44
RANBP3-209ENST00000587411 ATXN8Q156A1 80 aa12.31□□□□□ -0.44
RANBP3-209ENST00000587411 PTPRZ1P23471 2315 aaPredicted RBP12.31□□□□□ -0.44
RANBP3-209ENST00000587411 A0A0J9YX75 114 aa12.31□□□□□ -0.44
RANBP3-209ENST00000587411 GAGE5Q13069 117 aa12.31□□□□□ -0.44
RANBP3-209ENST00000587411 GAGE6Q13070 117 aa12.31□□□□□ -0.44
RANBP3-209ENST00000587411 A0A087WWL8 130 aa12.3□□□□□ -0.44
RANBP3-209ENST00000587411 TRBV12-3P01733 135 aa12.3□□□□□ -0.44
RANBP3-209ENST00000587411 JPT2Q9H910 190 aa12.3□□□□□ -0.44
RANBP3-209ENST00000587411 ANKHD1Q8IWZ3 2542 aaKnown RBP12.3□□□□□ -0.44
RANBP3-209ENST00000587411 RHODO00212 210 aa12.3□□□□□ -0.44
RANBP3-209ENST00000587411 TRPT1Q86TN4 253 aaKnown RBP12.3□□□□□ -0.44
RANBP3-209ENST00000587411 USMG5Q96IX5 58 aa12.3□□□□□ -0.44
RANBP3-209ENST00000587411 PIEZO2Q9H5I5 2752 aa12.3□□□□□ -0.44
RANBP3-209ENST00000587411 EIF4EBP3O60516 100 aaPredicted RBP12.29□□□□□ -0.44
RANBP3-209ENST00000587411 SNCGO76070 127 aa12.29□□□□□ -0.44
RANBP3-209ENST00000587411 BRI3O95415 125 aa12.29□□□□□ -0.44
RANBP3-209ENST00000587411 ZNF292O60281 2723 aa12.29□□□□□ -0.44
RANBP3-209ENST00000587411 TRAV2A0A0B4J234 112 aa12.29□□□□□ -0.44
RANBP3-209ENST00000587411 TCF15Q12870 199 aa12.29□□□□□ -0.44
RANBP3-209ENST00000587411 TMEM219Q86XT9 240 aa12.29□□□□□ -0.44
RANBP3-209ENST00000587411 MUSTN1Q8IVN3 82 aa12.29□□□□□ -0.44
RANBP3-209ENST00000587411 LINC00527Q9UJ94 153 aa12.29□□□□□ -0.44
RANBP3-209ENST00000587411 MUC6Q6W4X9 2439 aa12.28□□□□□ -0.44
RANBP3-209ENST00000587411 H3BUA1 57 aa12.28□□□□□ -0.44
RANBP3-209ENST00000587411 GAGE2BQ13066 116 aa12.28□□□□□ -0.44
RANBP3-209ENST00000587411 LINC01620Q4KN68 170 aa12.28□□□□□ -0.44
RANBP3-209ENST00000587411 GAGE2EQ4V326 116 aa12.28□□□□□ -0.44
RANBP3-209ENST00000587411 MDFICQ9P1T7 246 aa12.28□□□□□ -0.44
RANBP3-209ENST00000587411 GAGE2DQ9UEU5 116 aa12.28□□□□□ -0.44
RANBP3-209ENST00000587411 BSNQ9UPA5 3926 aa12.28□□□□□ -0.44
RANBP3-209ENST00000587411 ANKRD11Q6UB99 2663 aaPredicted RBP12.28□□□□□ -0.44
RANBP3-209ENST00000587411 GATA3P23771 443 aa12.28□□□□□ -0.44
RANBP3-209ENST00000587411 RPL13AP40429 203 aaKnown RBP12.28□□□□□ -0.44
RANBP3-209ENST00000587411 DEFB104AQ8WTQ1 72 aa12.28□□□□□ -0.44
RANBP3-209ENST00000587411 ZNF22P17026 224 aaPredicted RBP12.27□□□□□ -0.44
RANBP3-209ENST00000587411 RHPN1-AS1Q9BWJ2 59 aa12.27□□□□□ -0.44
RANBP3-209ENST00000587411 ZNF256Q9Y2P7 627 aaPredicted RBP12.27□□□□□ -0.44
RANBP3-209ENST00000587411 ACACAQ13085 2346 aa12.27□□□□□ -0.45
RANBP3-209ENST00000587411 M0R2P5 195 aa12.27□□□□□ -0.45
RANBP3-209ENST00000587411 Q1RN00 199 aa12.27□□□□□ -0.45
RANBP3-209ENST00000587411 Q8N1Y9 231 aa12.27□□□□□ -0.45
RANBP3-209ENST00000587411 ID1P41134 155 aa12.26□□□□□ -0.45
RANBP3-209ENST00000587411 CDSNQ15517 529 aa12.26□□□□□ -0.45
RANBP3-209ENST00000587411 Q6Q795 121 aa12.26□□□□□ -0.45
RANBP3-209ENST00000587411 NTN5Q8WTR8 489 aaPredicted RBP12.26□□□□□ -0.45
RANBP3-209ENST00000587411 TRBV30A0A0K0K1B3 111 aa12.26□□□□□ -0.45
RANBP3-209ENST00000587411 H7C2G1 150 aa12.26□□□□□ -0.45
RANBP3-209ENST00000587411 M0QY20 66 aa12.26□□□□□ -0.45
RANBP3-209ENST00000587411 C9orf85Q96MD7 179 aa12.26□□□□□ -0.45
RANBP3-209ENST00000587411 IGKV3-7A0A075B6H7 116 aa12.25□□□□□ -0.45
RANBP3-209ENST00000587411 TRBV10-2A0A0K0K1G8 114 aa12.25□□□□□ -0.45
RANBP3-209ENST00000587411 ADORA2A-AS1P86434 159 aa12.25□□□□□ -0.45
RANBP3-209ENST00000587411 K7ENP7 123 aa12.25□□□□□ -0.45
RANBP3-209ENST00000587411 FAM74A4Q5TZK3 123 aa12.25□□□□□ -0.45
RANBP3-209ENST00000587411 C20orf203Q8NBC4 194 aa12.25□□□□□ -0.45
RANBP3-209ENST00000587411 GVINP1Q7Z2Y8 2422 aa12.25□□□□□ -0.45
RANBP3-209ENST00000587411 MUC4Q99102 2169 aa12.25□□□□□ -0.45
RANBP3-209ENST00000587411 LMO4P61968 165 aa12.24□□□□□ -0.45
RANBP3-209ENST00000587411 ZNF56Q15929 161 aa12.24□□□□□ -0.45
RANBP3-209ENST00000587411 DAZ1Q9NQZ3 744 aaKnown RBP12.24□□□□□ -0.45
RANBP3-209ENST00000587411 NHLRC4P0CG21 123 aaPredicted RBP12.24□□□□□ -0.45
RANBP3-209ENST00000587411 NDUFV3P56181 108 aaKnown RBP12.24□□□□□ -0.45
RANBP3-209ENST00000587411 OPRPNQ99935 248 aaPredicted RBP12.24□□□□□ -0.45
RANBP3-209ENST00000587411 TRAV12-3A0A0B4J271 114 aa12.24□□□□□ -0.45
RANBP3-209ENST00000587411 IGHV3-16A0A0C4DH30 117 aa12.24□□□□□ -0.45
RANBP3-209ENST00000587411 A0A0J9YXY3 114 aa12.24□□□□□ -0.45
RANBP3-209ENST00000587411 ODF3Q96PU9 254 aa12.24□□□□□ -0.45
RANBP3-209ENST00000587411 ABCA4P78363 2273 aa12.23□□□□□ -0.45
RANBP3-209ENST00000587411 TRAV8-4A0A0B4J246 113 aa12.23□□□□□ -0.45
RANBP3-209ENST00000587411 IGHV3-11P01762 117 aa12.23□□□□□ -0.45
RANBP3-209ENST00000587411 AKAP13Q12802 2813 aa12.23□□□□□ -0.45
RANBP3-209ENST00000587411 TRAV4A0A0B4J268 109 aa12.22□□□□□ -0.45
RANBP3-209ENST00000587411 I3L3M4 83 aa12.22□□□□□ -0.45
RANBP3-209ENST00000587411 TTC32Q5I0X7 151 aa12.22□□□□□ -0.45
RANBP3-209ENST00000587411 SS18L2Q9UHA2 77 aa12.22□□□□□ -0.45
RANBP3-209ENST00000587411 CSMD1Q96PZ7 3565 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms