RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 KIAA1109Q2LD37 5005 aa5.7□□□□□ -1.5
VMP1-204ENST00000587259 NUPR2A6NF83 97 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 SERF1AO75920 110 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 PPP1R17O96001 155 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 ZNF705DP0CH99 300 aaPredicted RBP5.69□□□□□ -1.5
VMP1-204ENST00000587259 ZNF705BP0CI00 300 aaPredicted RBP5.69□□□□□ -1.5
VMP1-204ENST00000587259 RPL35AP18077 110 aaKnown RBP5.69□□□□□ -1.5
VMP1-204ENST00000587259 NTF3P20783 257 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 DEFB131AP59861 70 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 ZNF124Q15973 351 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 GDF5OSQ5U4N7 250 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 SYT8Q8NBV8 401 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 OR10D4PQ8NGN7 298 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 AP1S3Q96PC3 154 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 C12orf57Q99622 126 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 MAP6D1Q9H9H5 199 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 DNAH10Q8IVF4 4471 aa5.69□□□□□ -1.5
VMP1-204ENST00000587259 H3BMM0 161 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 H3BVH4 76 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 SPRY2O43597 315 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 ZNF324O75467 553 aaPredicted RBP5.68□□□□□ -1.5
VMP1-204ENST00000587259 AMTP48728 403 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 IQCJQ1A5X6 159 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 KIAA1644Q3SXP7 199 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 ANXA2RQ3ZCQ2 193 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 PDZD11Q5EBL8 140 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 PRR9Q5T870 116 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 GFI1BQ5VTD9 330 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 STHQ8IWL8 128 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 TMEM256Q8N2U0 113 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 PHLDA1Q8WV24 401 aaPredicted RBP5.68□□□□□ -1.5
VMP1-204ENST00000587259 MRAP2Q96G30 205 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 SCRT2Q9NQ03 307 aa5.68□□□□□ -1.5
VMP1-204ENST00000587259 MUC4Q99102 2169 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 IGHV1OR15-1A0A075B7D0 117 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 TRAV12-3A0A0B4J271 114 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 J3KRW8 73 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 DEFB4AO15263 64 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 NXPH4O95158 308 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 INSP01308 110 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 SMIM17P0DL12 118 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 CKS2P33552 79 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 NANOS2P60321 138 aaKnown RBP5.67□□□□□ -1.5
VMP1-204ENST00000587259 PIK3CD-AS1Q5SR53 167 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 RNASEKQ6P5S7 137 aaKnown RBP5.67□□□□□ -1.5
VMP1-204ENST00000587259 AMTNQ6UX39 209 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 PRELID3AQ96N28 172 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 LINC00467Q9BRT7 94 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 NDUFAF3Q9BU61 184 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 C1QTNF4Q9BXJ3 329 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 DPH3P1Q9H4G8 78 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 AP5S1Q9NUS5 200 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 C11orf21Q9P2W6 132 aa5.67□□□□□ -1.5
VMP1-204ENST00000587259 HECTD4Q9Y4D8 3996 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 IFITM10A6NMD0 228 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 D6R8Y8 96 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 K7EMI3 77 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 LINC00614P0C842 121 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 PRB4P10163 310 aaPredicted RBP5.66□□□□□ -1.5
VMP1-204ENST00000587259 S100A12P80511 92 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 JOSD1Q15040 202 aaPredicted RBP5.66□□□□□ -1.5
VMP1-204ENST00000587259 SPINK13Q1W4C9 94 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 ODF3L2Q3SX64 289 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 MRPL51Q4U2R6 128 aaKnown RBP5.66□□□□□ -1.5
VMP1-204ENST00000587259 MORN3Q6PF18 240 aaPredicted RBP5.66□□□□□ -1.5
VMP1-204ENST00000587259 FA2HQ7L5A8 372 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 AMN1Q8IY45 258 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 OR10AG1Q8NH19 301 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 PRSS3P2Q8NHM4 247 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 MAP1LC3AQ9H492 121 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 NXT2Q9NPJ8 142 aaKnown RBP5.66□□□□□ -1.5
VMP1-204ENST00000587259 TP53TG3Q9ULZ0 132 aa5.66□□□□□ -1.5
VMP1-204ENST00000587259 KLK5Q9Y337 293 aaPredicted RBP5.66□□□□□ -1.5
VMP1-204ENST00000587259 M0R2Z0 102 aa5.65□□□□□ -1.5
VMP1-204ENST00000587259 M0R381 172 aa5.65□□□□□ -1.5
VMP1-204ENST00000587259 EIF4EBP3O60516 100 aaPredicted RBP5.65□□□□□ -1.5
VMP1-204ENST00000587259 IGKV3-20P01619 116 aa5.65□□□□□ -1.5
VMP1-204ENST00000587259 RNASE3P12724 160 aaKnown RBP5.65□□□□□ -1.5
VMP1-204ENST00000587259 DEFB1P60022 68 aa5.65□□□□□ -1.5
VMP1-204ENST00000587259 ZNF415Q09FC8 603 aa5.65□□□□□ -1.5
VMP1-204ENST00000587259 MUC21Q5SSG8 566 aa5.65□□□□□ -1.5
VMP1-204ENST00000587259 RNF183Q96D59 192 aa5.65□□□□□ -1.5
VMP1-204ENST00000587259 GSN-AS1Q9NRJ2 163 aa5.65□□□□□ -1.5
VMP1-204ENST00000587259 HSPB8Q9UJY1 196 aa5.65□□□□□ -1.5
VMP1-204ENST00000587259 IGHV3-16A0A0C4DH30 117 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 C20orf202A1L168 122 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 CBY3A6NI87 242 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 LINC01549A6NIU2 74 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 KNCNA6PVL3 124 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 G0S2P27469 103 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 APOC4P55056 127 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 LINC00310P59036 64 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 PYY3Q5JQD4 70 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 LGALS9CQ6DKI2 356 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 Q6ZWC4 215 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 TRPT1Q86TN4 253 aaKnown RBP5.64□□□□□ -1.51
VMP1-204ENST00000587259 NIT1Q86X76 327 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 ZNF575Q86XF7 245 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 PTH2Q96A98 100 aa5.64□□□□□ -1.51
VMP1-204ENST00000587259 C9orf85Q96MD7 179 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms