RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 LYPD1Q8N2G4 141 aa7.41□□□□□ -1.22
ZNF540-205ENST00000587220 CMTM2Q8TAZ6 248 aa7.41□□□□□ -1.22
ZNF540-205ENST00000587220 ZNF492Q9P255 531 aa7.41□□□□□ -1.22
ZNF540-205ENST00000587220 NAGKQ9UJ70 344 aa7.41□□□□□ -1.22
ZNF540-205ENST00000587220 KLF12Q9Y4X4 402 aa7.41□□□□□ -1.22
ZNF540-205ENST00000587220 TCL1AP56279 114 aa7.4□□□□□ -1.22
ZNF540-205ENST00000587220 ZNF415Q09FC8 603 aa7.4□□□□□ -1.22
ZNF540-205ENST00000587220 ESRGQ1W209 222 aa7.4□□□□□ -1.22
ZNF540-205ENST00000587220 PRR9Q5T870 116 aa7.4□□□□□ -1.22
ZNF540-205ENST00000587220 TEX43Q6ZNM6 134 aa7.4□□□□□ -1.22
ZNF540-205ENST00000587220 ZNF575Q86XF7 245 aa7.4□□□□□ -1.22
ZNF540-205ENST00000587220 ZFAND2AQ8N6M9 145 aa7.4□□□□□ -1.22
ZNF540-205ENST00000587220 C18orf15Q96N68 181 aa7.4□□□□□ -1.22
ZNF540-205ENST00000587220 KRTAP17-1Q9BYP8 105 aa7.4□□□□□ -1.22
ZNF540-205ENST00000587220 MRPL18Q9H0U6 180 aaKnown RBP7.4□□□□□ -1.22
ZNF540-205ENST00000587220 Q9H3A6 140 aa7.4□□□□□ -1.22
ZNF540-205ENST00000587220 TRBV7-9A0A0J9YWB2 115 aa7.39□□□□□ -1.23
ZNF540-205ENST00000587220 SMIM27A0A1W2PRY6 76 aa7.39□□□□□ -1.23
ZNF540-205ENST00000587220 RBAKDNA6NC62 111 aa7.39□□□□□ -1.23
ZNF540-205ENST00000587220 C16orf90A8MZG2 172 aa7.39□□□□□ -1.23
ZNF540-205ENST00000587220 SPINK4O60575 86 aa7.39□□□□□ -1.23
ZNF540-205ENST00000587220 IGHV3-53P01767 116 aa7.39□□□□□ -1.23
ZNF540-205ENST00000587220 CENPWQ5EE01 88 aa7.39□□□□□ -1.23
ZNF540-205ENST00000587220 MUC21Q5SSG8 566 aa7.39□□□□□ -1.23
ZNF540-205ENST00000587220 DMRTA1Q5VZB9 504 aa7.39□□□□□ -1.23
ZNF540-205ENST00000587220 MRPL16Q9NX20 251 aaKnown RBP7.39□□□□□ -1.23
ZNF540-205ENST00000587220 TP53TG3Q9ULZ0 132 aa7.39□□□□□ -1.23
ZNF540-205ENST00000587220 RPH3ALQ9UNE2 315 aa7.39□□□□□ -1.23
ZNF540-205ENST00000587220 MRPS16Q9Y3D3 137 aaKnown RBP7.39□□□□□ -1.23
ZNF540-205ENST00000587220 PAX4O43316 350 aa7.38□□□□□ -1.23
ZNF540-205ENST00000587220 FAM162BQ5T6X4 162 aa7.38□□□□□ -1.23
ZNF540-205ENST00000587220 FAM159AQ6UWV7 190 aa7.38□□□□□ -1.23
ZNF540-205ENST00000587220 Q6ZQT7 251 aa7.38□□□□□ -1.23
ZNF540-205ENST00000587220 VSIG2Q96IQ7 327 aa7.38□□□□□ -1.23
ZNF540-205ENST00000587220 UPK3BQ9BT76 320 aa7.38□□□□□ -1.23
ZNF540-205ENST00000587220 PRO1933Q9H354 126 aa7.38□□□□□ -1.23
ZNF540-205ENST00000587220 ICOSQ9Y6W8 199 aa7.38□□□□□ -1.23
ZNF540-205ENST00000587220 A0A096LPF7 62 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 PGPEP1LA6NFU8 196 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 GGTLC3B5MD39 225 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 DIRC3C9JPN6 131 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 M0R143 59 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 SCGB1D1O95968 90 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 IGLV2-8P01709 118 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 SLAQ13239 276 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 TMEM183BQ1AE95 376 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 CT83Q5H943 113 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 TMEM136Q6ZRR5 245 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 ATP5L2Q7Z4Y8 100 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 OTORQ9NRC9 128 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 PRO0255Q9UI72 69 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 HHLA3Q9XRX5 114 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 LENEPQ9Y5L5 61 aa7.37□□□□□ -1.23
ZNF540-205ENST00000587220 TRGV11A0A075B6L2 103 aa7.36□□□□□ -1.23
ZNF540-205ENST00000587220 TRGV4A0A0C4DH28 118 aa7.36□□□□□ -1.23
ZNF540-205ENST00000587220 PGPA6NDG6 321 aa7.36□□□□□ -1.23
ZNF540-205ENST00000587220 RAB4AP20338 218 aa7.36□□□□□ -1.23
ZNF540-205ENST00000587220 KCNS1Q96KK3 526 aa7.36□□□□□ -1.23
ZNF540-205ENST00000587220 C8orf49Q96NF6 230 aa7.36□□□□□ -1.23
ZNF540-205ENST00000587220 FAM231BA6NCW3 169 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 SIVA1O15304 175 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 SERF1AO75920 110 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 LINC00310P59036 64 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 GOLT1AQ6ZVE7 132 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 BAGE3Q86Y29 109 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 BAGE2Q86Y30 109 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 MIEN1Q9BRT3 115 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 KRTAP1-5Q9BYS1 174 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 MDFICQ9P1T7 246 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 NAT8BQ9UHF3 227 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 DNAH11Q96DT5 4516 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 MUC4Q99102 2169 aa7.35□□□□□ -1.23
ZNF540-205ENST00000587220 DYNC1H1Q14204 4646 aaKnown RBP7.34□□□□□ -1.23
ZNF540-205ENST00000587220 TRBV6-1A0A0K0K1D8 114 aa7.34□□□□□ -1.23
ZNF540-205ENST00000587220 C20orf202A1L168 122 aa7.34□□□□□ -1.23
ZNF540-205ENST00000587220 PEX7O00628 323 aa7.34□□□□□ -1.23
ZNF540-205ENST00000587220 NXPH4O95158 308 aa7.34□□□□□ -1.23
ZNF540-205ENST00000587220 BTF3P20290 206 aaKnown RBP7.34□□□□□ -1.23
ZNF540-205ENST00000587220 CRYBA4P53673 196 aa7.34□□□□□ -1.23
ZNF540-205ENST00000587220 SUMO1P63165 101 aaKnown RBP7.34□□□□□ -1.23
ZNF540-205ENST00000587220 MRPL23Q16540 153 aaKnown RBP7.34□□□□□ -1.23
ZNF540-205ENST00000587220 Q6AWC8 147 aa7.34□□□□□ -1.23
ZNF540-205ENST00000587220 SPATA12Q7Z6I5 190 aa7.34□□□□□ -1.23
ZNF540-205ENST00000587220 SPXQ9BT56 116 aa7.34□□□□□ -1.23
ZNF540-205ENST00000587220 NDFIP1Q9BT67 221 aa7.34□□□□□ -1.23
ZNF540-205ENST00000587220 SAMD10Q9BYL1 202 aa7.34□□□□□ -1.23
ZNF540-205ENST00000587220 TRAV21A0A0B4J279 112 aa7.33□□□□□ -1.24
ZNF540-205ENST00000587220 A0A1B0GV90 55 aa7.33□□□□□ -1.24
ZNF540-205ENST00000587220 K7EQM0 130 aa7.33□□□□□ -1.24
ZNF540-205ENST00000587220 NUPR1O60356 82 aa7.33□□□□□ -1.24
ZNF540-205ENST00000587220 SRIP30626 198 aa7.33□□□□□ -1.24
ZNF540-205ENST00000587220 FHL2Q14192 279 aa7.33□□□□□ -1.24
ZNF540-205ENST00000587220 NEGR1Q7Z3B1 354 aa7.33□□□□□ -1.24
ZNF540-205ENST00000587220 TSKUQ8WUA8 353 aa7.33□□□□□ -1.24
ZNF540-205ENST00000587220 FMC1Q96HJ9 113 aa7.33□□□□□ -1.24
ZNF540-205ENST00000587220 VAMP8Q9BV40 100 aa7.33□□□□□ -1.24
ZNF540-205ENST00000587220 GFRA4Q9GZZ7 299 aa7.33□□□□□ -1.24
ZNF540-205ENST00000587220 TRAV9-2A0A087WT02 112 aa7.32□□□□□ -1.24
ZNF540-205ENST00000587220 TRAV8-1A0A0A6YYK1 113 aa7.32□□□□□ -1.24
ZNF540-205ENST00000587220 GRIFINA4D1Z8 144 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms