RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 FLI1Q01543 452 aaPredicted RBP3.78□□□□□ -1.8
TPM4-203ENST00000586193 PEA15Q15121 130 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 MSMO1Q15800 293 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 LTC4SQ16873 150 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 DEFB113Q30KQ7 82 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 SPINK9Q5DT21 86 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 GOLT1AQ6ZVE7 132 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 OR13C6PQ8NH95 151 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 CLDND2Q8NHS1 167 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 MBD3L1Q8WWY6 194 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 C11orf68Q9H3H3 251 aaKnown RBP3.78□□□□□ -1.8
TPM4-203ENST00000586193 RPRMQ9NS64 109 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 SS18L2Q9UHA2 77 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 SMPXQ9UHP9 88 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 KLK5Q9Y337 293 aaPredicted RBP3.78□□□□□ -1.8
TPM4-203ENST00000586193 F8P00451 2351 aa3.78□□□□□ -1.8
TPM4-203ENST00000586193 TRAV1-1A0A0B4J248 108 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 C19orf71A6NCJ1 209 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 DPRXA6NFQ7 191 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 ZNF727A8MUV8 499 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 OR11H12B2RN74 326 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 UMAD1C9J7I0 102 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 HMGB3O15347 200 aaKnown RBP3.77□□□□□ -1.81
TPM4-203ENST00000586193 LY6HO94772 140 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 IGHV3-7P01780 117 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 PRH1P02810 166 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 GLRXP35754 106 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 RAB13P51153 203 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 TNFRSF9Q07011 255 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 SLC38A11Q08AI6 406 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 MOBPQ13875 183 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 SMIM21Q3B7S5 101 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 MORN2Q502X0 79 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 RPL39P5Q59GN2 51 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 SPANXN5Q5MJ07 72 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 ZNF439Q8NDP4 499 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 WFDC11Q8NEX6 87 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 OR11H6Q8NGC7 330 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 OR11H2Q8NH07 326 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 LEAP2Q969E1 77 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 GAFA1Q96PS6 74 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 SLC35B3Q9H1N7 401 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 COA4Q9NYJ1 87 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 PRRC2AP48634 2157 aaKnown RBP3.77□□□□□ -1.81
TPM4-203ENST00000586193 VPS13CQ709C8 3753 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 TEP1Q99973 2627 aaKnown RBP3.77□□□□□ -1.81
TPM4-203ENST00000586193 ZNF469Q96JG9 3925 aaPredicted RBP3.77□□□□□ -1.81
TPM4-203ENST00000586193 POLQO75417 2590 aa3.77□□□□□ -1.81
TPM4-203ENST00000586193 HIVEP1P15822 2718 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 UBE2L5PA0A1B0GUS4 154 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 YPEL1O60688 119 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 CXCL1P09341 107 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 AKR1C8PQ5T2L2 129 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 LCN15Q6UWW0 184 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 DPPA3Q6W0C5 159 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 ZNF561Q8N587 486 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 FAM216BQ8N7L0 139 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 RNASE11Q8TAA1 199 aaKnown RBP3.76□□□□□ -1.81
TPM4-203ENST00000586193 MUCL1Q96DR8 90 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 YPEL2Q96QA6 119 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 CCL19Q99731 98 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 SMR3AQ99954 134 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 PSMG3Q9BT73 122 aaPredicted RBP3.76□□□□□ -1.81
TPM4-203ENST00000586193 C16orf95Q9H693 158 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 SMCO4Q9NRQ5 59 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 JPT1Q9UK76 154 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 RBM7Q9Y580 266 aaKnown RBP3.76□□□□□ -1.81
TPM4-203ENST00000586193 HRNRQ86YZ3 2850 aaPredicted RBP3.76□□□□□ -1.81
TPM4-203ENST00000586193 CCDC168Q8NDH2 2452 aa3.76□□□□□ -1.81
TPM4-203ENST00000586193 H3BQ15 152 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 GYPAP02724 150 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 BCL2P10415 239 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 DEFA4P12838 97 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 S100GP29377 79 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 RPL27AP46776 148 aaKnown RBP3.75□□□□□ -1.81
TPM4-203ENST00000586193 FAM229BQ4G0N7 80 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 KHDC3LQ587J8 217 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 SSX8Q7RTT4 187 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 RPP25LQ8N5L8 163 aaKnown RBP3.75□□□□□ -1.81
TPM4-203ENST00000586193 DEFB108BQ8NET1 73 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 SFT2D1Q8WV19 159 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 MALSU1Q96EH3 234 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 TUBA4BQ9H853 241 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 BIN3Q9NQY0 253 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 GNG13Q9P2W3 67 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 TIMM9Q9Y5J7 89 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 ZFHX3Q15911 3703 aa3.75□□□□□ -1.81
TPM4-203ENST00000586193 IGKV2-28A0A075B6P5 120 aa3.74□□□□□ -1.81
TPM4-203ENST00000586193 MAP1LC3B2A6NCE7 125 aa3.74□□□□□ -1.81
TPM4-203ENST00000586193 GGTLC3B5MD39 225 aa3.74□□□□□ -1.81
TPM4-203ENST00000586193 IGKV2D-28P01615 120 aa3.74□□□□□ -1.81
TPM4-203ENST00000586193 SAA2P0DJI9 122 aaPredicted RBP3.74□□□□□ -1.81
TPM4-203ENST00000586193 FGF7P21781 194 aa3.74□□□□□ -1.81
TPM4-203ENST00000586193 S100A7P31151 101 aa3.74□□□□□ -1.81
TPM4-203ENST00000586193 RPL35P42766 123 aaKnown RBP3.74□□□□□ -1.81
TPM4-203ENST00000586193 EDDM3BP56851 147 aa3.74□□□□□ -1.81
TPM4-203ENST00000586193 AKAP6Q13023 2319 aa3.74□□□□□ -1.81
TPM4-203ENST00000586193 CATR1Q13166 79 aa3.74□□□□□ -1.81
TPM4-203ENST00000586193 RHEBQ15382 184 aa3.74□□□□□ -1.81
TPM4-203ENST00000586193 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms