RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 RNASE8Q8TDE3 154 aaKnown RBP9.13□□□□□ -0.95
VMP1-202ENST00000585847 PACRGQ96M98 296 aaPredicted RBP9.13□□□□□ -0.95
VMP1-202ENST00000585847 RCHY1Q96PM5 261 aa9.13□□□□□ -0.95
VMP1-202ENST00000585847 ALKBH7Q9BT30 221 aaPredicted RBP9.13□□□□□ -0.95
VMP1-202ENST00000585847 EDA2RQ9HAV5 297 aa9.13□□□□□ -0.95
VMP1-202ENST00000585847 TP53TG1Q9Y2A0 90 aa9.13□□□□□ -0.95
VMP1-202ENST00000585847 TEX48A0A1B0GUV7 120 aa9.12□□□□□ -0.95
VMP1-202ENST00000585847 H7C1H1 209 aa9.12□□□□□ -0.95
VMP1-202ENST00000585847 K7EMI3 77 aa9.12□□□□□ -0.95
VMP1-202ENST00000585847 NHLRC4P0CG21 123 aaPredicted RBP9.12□□□□□ -0.95
VMP1-202ENST00000585847 ESDP10768 282 aa9.12□□□□□ -0.95
VMP1-202ENST00000585847 SRIP30626 198 aa9.12□□□□□ -0.95
VMP1-202ENST00000585847 ZNF876PQ49A33 203 aa9.12□□□□□ -0.95
VMP1-202ENST00000585847 C11orf72Q8NBR9 251 aa9.12□□□□□ -0.95
VMP1-202ENST00000585847 RASL10AQ92737 203 aa9.12□□□□□ -0.95
VMP1-202ENST00000585847 OVOL2Q9BRP0 275 aa9.12□□□□□ -0.95
VMP1-202ENST00000585847 C5orf52A6NGY3 159 aa9.11□□□□□ -0.95
VMP1-202ENST00000585847 CKS2P33552 79 aa9.11□□□□□ -0.95
VMP1-202ENST00000585847 DEFB135Q30KP9 77 aa9.11□□□□□ -0.95
VMP1-202ENST00000585847 ZFP2Q6ZN57 461 aa9.11□□□□□ -0.95
VMP1-202ENST00000585847 Q6ZQT7 251 aa9.11□□□□□ -0.95
VMP1-202ENST00000585847 MDFICQ9P1T7 246 aa9.11□□□□□ -0.95
VMP1-202ENST00000585847 MIFP14174 115 aa9.1□□□□□ -0.95
VMP1-202ENST00000585847 RAB4AP20338 218 aa9.1□□□□□ -0.95
VMP1-202ENST00000585847 PMCHP20382 165 aa9.1□□□□□ -0.95
VMP1-202ENST00000585847 BAGE3Q86Y29 109 aa9.1□□□□□ -0.95
VMP1-202ENST00000585847 AMN1Q8IY45 258 aa9.1□□□□□ -0.95
VMP1-202ENST00000585847 CHCHD1Q96BP2 118 aaKnown RBP9.1□□□□□ -0.95
VMP1-202ENST00000585847 RNF183Q96D59 192 aa9.1□□□□□ -0.95
VMP1-202ENST00000585847 C18orf15Q96N68 181 aa9.1□□□□□ -0.95
VMP1-202ENST00000585847 C20orf78Q9BR46 151 aa9.1□□□□□ -0.95
VMP1-202ENST00000585847 LINC01549A6NIU2 74 aa9.09□□□□□ -0.95
VMP1-202ENST00000585847 TCAPO15273 167 aa9.09□□□□□ -0.95
VMP1-202ENST00000585847 EVI2AP22794 236 aa9.09□□□□□ -0.95
VMP1-202ENST00000585847 RPL32P62910 135 aaKnown RBP9.09□□□□□ -0.95
VMP1-202ENST00000585847 MRPL51Q4U2R6 128 aaKnown RBP9.09□□□□□ -0.95
VMP1-202ENST00000585847 C18orf32Q8TCD1 76 aa9.09□□□□□ -0.95
VMP1-202ENST00000585847 PRELID3AQ96N28 172 aa9.09□□□□□ -0.95
VMP1-202ENST00000585847 NXT2Q9NPJ8 142 aaKnown RBP9.09□□□□□ -0.95
VMP1-202ENST00000585847 TIMM8BQ9Y5J9 83 aaPredicted RBP9.09□□□□□ -0.95
VMP1-202ENST00000585847 LYRM9A8MSI8 78 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 D6R8Y8 96 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 C3orf84H3BNL1 204 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 SPRY2O43597 315 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 HOXA5P20719 270 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 S100A2P29034 98 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 RNF185Q96GF1 192 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 SPATA25Q9BR10 227 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 MAP1LC3AQ9H492 121 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 MSRB1Q9NZV6 116 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 KIF25-AS1Q9Y6Z4 181 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 X6R8D5 127 aa9.08□□□□□ -0.96
VMP1-202ENST00000585847 HTN1P15515 57 aa9.07□□□□□ -0.96
VMP1-202ENST00000585847 G0S2P27469 103 aa9.07□□□□□ -0.96
VMP1-202ENST00000585847 NDUFA6P56556 154 aa9.07□□□□□ -0.96
VMP1-202ENST00000585847 TMEM18Q96B42 140 aa9.07□□□□□ -0.96
VMP1-202ENST00000585847 IGHV3OR16-12A0A075B7B8 117 aa9.06□□□□□ -0.96
VMP1-202ENST00000585847 TRBV6-5A0A0K0K1A5 114 aa9.06□□□□□ -0.96
VMP1-202ENST00000585847 PRM2P04554 102 aa9.06□□□□□ -0.96
VMP1-202ENST00000585847 C14orf178Q8N769 122 aaPredicted RBP9.06□□□□□ -0.96
VMP1-202ENST00000585847 TRAV4A0A0B4J268 109 aa9.05□□□□□ -0.96
VMP1-202ENST00000585847 MUC21A0A0G2JKD1 596 aa9.05□□□□□ -0.96
VMP1-202ENST00000585847 MUC21A0A140T8X8 626 aa9.05□□□□□ -0.96
VMP1-202ENST00000585847 RS1O15537 224 aa9.05□□□□□ -0.96
VMP1-202ENST00000585847 CRYGDP07320 174 aa9.05□□□□□ -0.96
VMP1-202ENST00000585847 SNRPEP62304 92 aaKnown RBP9.05□□□□□ -0.96
VMP1-202ENST00000585847 KIAA1644Q3SXP7 199 aa9.05□□□□□ -0.96
VMP1-202ENST00000585847 ZMAT4Q9H898 229 aa9.05□□□□□ -0.96
VMP1-202ENST00000585847 AP5S1Q9NUS5 200 aa9.05□□□□□ -0.96
VMP1-202ENST00000585847 TRBV10-1A0A0K0K1A3 114 aa9.04□□□□□ -0.96
VMP1-202ENST00000585847 HSBP1O75506 76 aa9.04□□□□□ -0.96
VMP1-202ENST00000585847 TNFRSF6BO95407 300 aa9.04□□□□□ -0.96
VMP1-202ENST00000585847 AZU1P20160 251 aa9.04□□□□□ -0.96
VMP1-202ENST00000585847 LINC00315P59091 139 aa9.04□□□□□ -0.96
VMP1-202ENST00000585847 FA2HQ7L5A8 372 aa9.04□□□□□ -0.96
VMP1-202ENST00000585847 LINC00612Q8N6U2 182 aa9.04□□□□□ -0.96
VMP1-202ENST00000585847 Q8NAQ8 132 aa9.04□□□□□ -0.96
VMP1-202ENST00000585847 OR11H2Q8NH07 326 aa9.04□□□□□ -0.96
VMP1-202ENST00000585847 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
VMP1-202ENST00000585847 TRGV1A0A0A0MS02 117 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 LINC01546A6NGU7 62 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 MGPP08493 103 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 AKR1D1P51857 326 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 SSTP61278 116 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 SUMO2P61956 95 aaKnown RBP9.03□□□□□ -0.96
VMP1-202ENST00000585847 ZNF56Q15929 161 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 CFAP126Q5VTH2 177 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 UFSP1Q6NVU6 142 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 HIST3H2BBQ8N257 126 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 OR4C5Q8NGB2 326 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 PRSS3P2Q8NHM4 247 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 STAB2Q8WWQ8 2551 aa9.03□□□□□ -0.96
VMP1-202ENST00000585847 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.97
VMP1-202ENST00000585847 F5H697 171 aa9.02□□□□□ -0.97
VMP1-202ENST00000585847 SERF1AO75920 110 aa9.02□□□□□ -0.97
VMP1-202ENST00000585847 IGHV3-53P01767 116 aa9.02□□□□□ -0.97
VMP1-202ENST00000585847 LINC00614P0C842 121 aa9.02□□□□□ -0.97
VMP1-202ENST00000585847 NRACQ8N912 160 aa9.02□□□□□ -0.97
VMP1-202ENST00000585847 MUC7Q8TAX7 377 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms