RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 ICOSQ9Y6W8 199 aa16.11■□□□□ 0.17
LSM7-202ENST00000585395 NXPH4O95158 308 aa16.1■□□□□ 0.17
LSM7-202ENST00000585395 IGLC6P0CF74 106 aa16.1■□□□□ 0.17
LSM7-202ENST00000585395 ADIRFQ15847 76 aa16.1■□□□□ 0.17
LSM7-202ENST00000585395 OR10AG1Q8NH19 301 aa16.1■□□□□ 0.17
LSM7-202ENST00000585395 PRADC1Q9BSG0 188 aa16.1■□□□□ 0.17
LSM7-202ENST00000585395 DNAH6Q9C0G6 4158 aa16.09■□□□□ 0.17
LSM7-202ENST00000585395 IGLV2-18A0A075B6J9 118 aa16.09■□□□□ 0.17
LSM7-202ENST00000585395 GZMBP10144 247 aa16.09■□□□□ 0.17
LSM7-202ENST00000585395 GATA1P15976 413 aaPredicted RBP16.09■□□□□ 0.17
LSM7-202ENST00000585395 RPL23P62829 140 aaKnown RBP16.09■□□□□ 0.17
LSM7-202ENST00000585395 MRPL23Q16540 153 aaKnown RBP16.09■□□□□ 0.17
LSM7-202ENST00000585395 LINC00336Q6ZUF6 198 aa16.09■□□□□ 0.17
LSM7-202ENST00000585395 VSIG2Q96IQ7 327 aa16.09■□□□□ 0.17
LSM7-202ENST00000585395 TRBV6-4A0A1B0GX49 114 aa16.08■□□□□ 0.16
LSM7-202ENST00000585395 SMIM17P0DL12 118 aa16.08■□□□□ 0.16
LSM7-202ENST00000585395 CCL18P55774 89 aa16.08■□□□□ 0.16
LSM7-202ENST00000585395 RHOHQ15669 191 aa16.08■□□□□ 0.16
LSM7-202ENST00000585395 WDR73Q6P4I2 378 aa16.08■□□□□ 0.16
LSM7-202ENST00000585395 AP1S3Q96PC3 154 aa16.08■□□□□ 0.16
LSM7-202ENST00000585395 SH2D6Q7Z4S9 175 aa16.07■□□□□ 0.16
LSM7-202ENST00000585395 ISOC2Q96AB3 205 aa16.07■□□□□ 0.16
LSM7-202ENST00000585395 BORCS7Q96B45 105 aa16.07■□□□□ 0.16
LSM7-202ENST00000585395 IGHV3-73A0A0B4J1V6 119 aa16.06■□□□□ 0.16
LSM7-202ENST00000585395 FAM3BP58499 235 aaPredicted RBP16.06■□□□□ 0.16
LSM7-202ENST00000585395 FAM74A4Q5TZK3 123 aa16.06■□□□□ 0.16
LSM7-202ENST00000585395 TRGC1P0CF51 173 aa16.05■□□□□ 0.16
LSM7-202ENST00000585395 SRIP30626 198 aa16.05■□□□□ 0.16
LSM7-202ENST00000585395 CTRLP40313 264 aa16.05■□□□□ 0.16
LSM7-202ENST00000585395 PNRC1Q12796 327 aaPredicted RBP16.05■□□□□ 0.16
LSM7-202ENST00000585395 LYZL1Q6UWQ5 148 aa16.05■□□□□ 0.16
LSM7-202ENST00000585395 OR10G8Q8NGN5 311 aa16.05■□□□□ 0.16
LSM7-202ENST00000585395 GFRA4Q9GZZ7 299 aa16.05■□□□□ 0.16
LSM7-202ENST00000585395 FAM231BA6NCW3 169 aa16.04■□□□□ 0.16
LSM7-202ENST00000585395 GYPEP15421 78 aa16.04■□□□□ 0.16
LSM7-202ENST00000585395 NACAE9PAV3 2078 aa16.04■□□□□ 0.16
LSM7-202ENST00000585395 A0A087WWL8 130 aa16.03■□□□□ 0.16
LSM7-202ENST00000585395 A0A096LPF7 62 aa16.03■□□□□ 0.16
LSM7-202ENST00000585395 MUC21A0A0G2JKD1 596 aa16.03■□□□□ 0.16
LSM7-202ENST00000585395 MUC21A0A140T8X8 626 aa16.03■□□□□ 0.16
LSM7-202ENST00000585395 SSTP61278 116 aa16.03■□□□□ 0.16
LSM7-202ENST00000585395 SLC25A29Q8N8R3 303 aa16.03■□□□□ 0.16
LSM7-202ENST00000585395 TSKUQ8WUA8 353 aa16.03■□□□□ 0.16
LSM7-202ENST00000585395 JPT2Q9H910 190 aa16.03■□□□□ 0.16
LSM7-202ENST00000585395 A0A1B0GVY2 172 aa16.02■□□□□ 0.16
LSM7-202ENST00000585395 SMIM15Q7Z3B0 74 aa16.02■□□□□ 0.16
LSM7-202ENST00000585395 NEGR1Q7Z3B1 354 aa16.02■□□□□ 0.16
LSM7-202ENST00000585395 COMMD7Q86VX2 200 aa16.02■□□□□ 0.16
LSM7-202ENST00000585395 SAMD10Q9BYL1 202 aa16.02■□□□□ 0.16
LSM7-202ENST00000585395 FAT2Q9NYQ8 4349 aa16.01■□□□□ 0.15
LSM7-202ENST00000585395 K7EQD1 137 aa16.01■□□□□ 0.15
LSM7-202ENST00000585395 CRYGDP07320 174 aa16.01■□□□□ 0.15
LSM7-202ENST00000585395 UFSP1Q6NVU6 142 aa16.01■□□□□ 0.15
LSM7-202ENST00000585395 CNFNQ9BYD5 112 aa16.01■□□□□ 0.15
LSM7-202ENST00000585395 PPP1R2P9O14990 202 aa16■□□□□ 0.15
LSM7-202ENST00000585395 FOXA3P55318 350 aaPredicted RBP16■□□□□ 0.15
LSM7-202ENST00000585395 RAB4BP61018 213 aa16■□□□□ 0.15
LSM7-202ENST00000585395 TWIST1Q15672 202 aa16■□□□□ 0.15
LSM7-202ENST00000585395 ZNF56Q15929 161 aa16■□□□□ 0.15
LSM7-202ENST00000585395 LINC00862A6NCI5 91 aa15.99■□□□□ 0.15
LSM7-202ENST00000585395 C14orf178Q8N769 122 aaPredicted RBP15.99■□□□□ 0.15
LSM7-202ENST00000585395 V9GYV3 84 aa15.99■□□□□ 0.15
LSM7-202ENST00000585395 F5H697 171 aa15.98■□□□□ 0.15
LSM7-202ENST00000585395 NTF3P20783 257 aa15.98■□□□□ 0.15
LSM7-202ENST00000585395 GTSF1Q8WW33 167 aa15.98■□□□□ 0.15
LSM7-202ENST00000585395 PGLYRP4Q96LB8 373 aa15.98■□□□□ 0.15
LSM7-202ENST00000585395 LINC00588Q9Y4M8 146 aa15.98■□□□□ 0.15
LSM7-202ENST00000585395 TRBV10-1A0A0K0K1A3 114 aa15.97■□□□□ 0.15
LSM7-202ENST00000585395 TMEM218A2RU14 115 aa15.97■□□□□ 0.15
LSM7-202ENST00000585395 NAT8BQ9UHF3 227 aa15.97■□□□□ 0.15
LSM7-202ENST00000585395 DNAH2Q9P225 4427 aa15.97■□□□□ 0.15
LSM7-202ENST00000585395 HIGD1CA8MV81 97 aa15.96■□□□□ 0.15
LSM7-202ENST00000585395 F8W036 122 aa15.96■□□□□ 0.15
LSM7-202ENST00000585395 DPH3P1Q9H4G8 78 aa15.96■□□□□ 0.15
LSM7-202ENST00000585395 A0A1B0GUT8 65 aa15.95■□□□□ 0.14
LSM7-202ENST00000585395 H7C1H1 209 aa15.95■□□□□ 0.14
LSM7-202ENST00000585395 MT-ND4LP03901 98 aa15.95■□□□□ 0.14
LSM7-202ENST00000585395 ESRGQ1W209 222 aa15.95■□□□□ 0.14
LSM7-202ENST00000585395 MRPS16Q9Y3D3 137 aaKnown RBP15.95■□□□□ 0.14
LSM7-202ENST00000585395 MGPP08493 103 aa15.94■□□□□ 0.14
LSM7-202ENST00000585395 RPL36AP83881 106 aaKnown RBP15.94■□□□□ 0.14
LSM7-202ENST00000585395 RIGQ13278 110 aa15.94■□□□□ 0.14
LSM7-202ENST00000585395 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.94■□□□□ 0.14
LSM7-202ENST00000585395 ZNRF2Q8NHG8 242 aa15.94■□□□□ 0.14
LSM7-202ENST00000585395 RPL36ALQ969Q0 106 aaKnown RBP15.94■□□□□ 0.14
LSM7-202ENST00000585395 MSRB1Q9NZV6 116 aa15.94■□□□□ 0.14
LSM7-202ENST00000585395 DNAH17Q9UFH2 4485 aa15.94■□□□□ 0.14
LSM7-202ENST00000585395 LOC100131303A0A0U1RQF7 123 aa15.93■□□□□ 0.14
LSM7-202ENST00000585395 C1orf134Q5TEV5 83 aa15.93■□□□□ 0.14
LSM7-202ENST00000585395 Q6ZSN1 163 aa15.93■□□□□ 0.14
LSM7-202ENST00000585395 ANAPC16Q96DE5 110 aa15.93■□□□□ 0.14
LSM7-202ENST00000585395 SEC11CQ9BY50 192 aa15.93■□□□□ 0.14
LSM7-202ENST00000585395 KRTAP4-5Q9BYR2 181 aa15.93■□□□□ 0.14
LSM7-202ENST00000585395 KIF25-AS1Q9Y6Z4 181 aa15.93■□□□□ 0.14
LSM7-202ENST00000585395 GAGE12JA6NER3 117 aa15.92■□□□□ 0.14
LSM7-202ENST00000585395 PRSS29PA6NIE9 313 aa15.92■□□□□ 0.14
LSM7-202ENST00000585395 TIRAPP58753 221 aa15.92■□□□□ 0.14
LSM7-202ENST00000585395 GAGE1Q13065 139 aa15.92■□□□□ 0.14
LSM7-202ENST00000585395 GAGE4Q13068 117 aa15.92■□□□□ 0.14
LSM7-202ENST00000585395 GAGE5Q13069 117 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms