RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 ZNF479Q96JC4 524 aa11.56□□□□□ -0.56
CSNK1D-225ENST00000584913 C11orf21Q9P2W6 132 aa11.56□□□□□ -0.56
CSNK1D-225ENST00000584913 IGHV3-53P01767 116 aa11.55□□□□□ -0.56
CSNK1D-225ENST00000584913 DNLZQ5SXM8 178 aa11.55□□□□□ -0.56
CSNK1D-225ENST00000584913 IMMP2LQ96T52 175 aa11.55□□□□□ -0.56
CSNK1D-225ENST00000584913 PKHD1P08F94 4074 aa11.54□□□□□ -0.56
CSNK1D-225ENST00000584913 TIRAPP58753 221 aa11.54□□□□□ -0.56
CSNK1D-225ENST00000584913 ERVFC1-1P60608 527 aa11.54□□□□□ -0.56
CSNK1D-225ENST00000584913 ZNF876PQ49A33 203 aa11.54□□□□□ -0.56
CSNK1D-225ENST00000584913 NHLRC2Q8NBF2 726 aa11.54□□□□□ -0.56
CSNK1D-225ENST00000584913 K7EQD1 137 aa11.53□□□□□ -0.56
CSNK1D-225ENST00000584913 RNASE3P12724 160 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-225ENST00000584913 SRIP30626 198 aa11.53□□□□□ -0.56
CSNK1D-225ENST00000584913 PKD1P98161 4303 aa11.53□□□□□ -0.56
CSNK1D-225ENST00000584913 RS1O15537 224 aa11.52□□□□□ -0.57
CSNK1D-225ENST00000584913 GATA1P15976 413 aaPredicted RBP11.52□□□□□ -0.57
CSNK1D-225ENST00000584913 S100PP25815 95 aa11.52□□□□□ -0.57
CSNK1D-225ENST00000584913 KCNIP4Q6PIL6 250 aa11.52□□□□□ -0.57
CSNK1D-225ENST00000584913 YPEL4Q96NS1 127 aa11.52□□□□□ -0.57
CSNK1D-225ENST00000584913 IL36BQ9NZH7 164 aa11.52□□□□□ -0.57
CSNK1D-225ENST00000584913 V9GYV3 84 aa11.52□□□□□ -0.57
CSNK1D-225ENST00000584913 IGKV3D-20A0A0C4DH25 116 aa11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 TRBV6-4A0A1B0GX49 114 aa11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 C19orf71A6NCJ1 209 aa11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 SIVA1O15304 175 aa11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 ASIPP42127 132 aa11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 CT83Q5H943 113 aa11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 FAM162BQ5T6X4 162 aa11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 LYPD5Q6UWN5 251 aa11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 ZFP2Q6ZN57 461 aa11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 BTF3L4Q96K17 158 aa11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 RNASE7Q9H1E1 156 aaKnown RBP11.51□□□□□ -0.57
CSNK1D-225ENST00000584913 TRAV9-1A0A075B6T8 112 aa11.5□□□□□ -0.57
CSNK1D-225ENST00000584913 A8MWV9 139 aa11.5□□□□□ -0.57
CSNK1D-225ENST00000584913 GATCO43716 136 aaKnown RBP11.5□□□□□ -0.57
CSNK1D-225ENST00000584913 GYPEP15421 78 aa11.5□□□□□ -0.57
CSNK1D-225ENST00000584913 ELOBQ15370 118 aa11.5□□□□□ -0.57
CSNK1D-225ENST00000584913 RHOHQ15669 191 aa11.5□□□□□ -0.57
CSNK1D-225ENST00000584913 CFAP126Q5VTH2 177 aa11.5□□□□□ -0.57
CSNK1D-225ENST00000584913 PRR27Q6MZM9 219 aa11.5□□□□□ -0.57
CSNK1D-225ENST00000584913 DAZAP1Q96EP5 407 aaKnown RBP11.5□□□□□ -0.57
CSNK1D-225ENST00000584913 DNAH11Q96DT5 4516 aa11.5□□□□□ -0.57
CSNK1D-225ENST00000584913 TRBV24-1A0A075B6N3 115 aa11.49□□□□□ -0.57
CSNK1D-225ENST00000584913 COLCA2A8K830 154 aa11.49□□□□□ -0.57
CSNK1D-225ENST00000584913 NXPH4O95158 308 aa11.49□□□□□ -0.57
CSNK1D-225ENST00000584913 P01737 135 aa11.49□□□□□ -0.57
CSNK1D-225ENST00000584913 S100A4P26447 101 aaKnown RBP11.49□□□□□ -0.57
CSNK1D-225ENST00000584913 LINC01559Q495D7 138 aa11.49□□□□□ -0.57
CSNK1D-225ENST00000584913 NUDT10Q8NFP7 164 aa11.49□□□□□ -0.57
CSNK1D-225ENST00000584913 NUDT11Q96G61 164 aa11.49□□□□□ -0.57
CSNK1D-225ENST00000584913 KRTAP1-5Q9BYS1 174 aa11.49□□□□□ -0.57
CSNK1D-225ENST00000584913 HERC2O95714 4834 aa11.49□□□□□ -0.57
CSNK1D-225ENST00000584913 CXCL1P09341 107 aa11.48□□□□□ -0.57
CSNK1D-225ENST00000584913 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-225ENST00000584913 PRADC1Q9BSG0 188 aa11.48□□□□□ -0.57
CSNK1D-225ENST00000584913 RPP21Q9H633 154 aaKnown RBP11.48□□□□□ -0.57
CSNK1D-225ENST00000584913 DYNC1H1Q14204 4646 aaKnown RBP11.47□□□□□ -0.57
CSNK1D-225ENST00000584913 TRAV9-2A0A087WT02 112 aa11.47□□□□□ -0.57
CSNK1D-225ENST00000584913 SH2D1AO60880 128 aa11.47□□□□□ -0.57
CSNK1D-225ENST00000584913 CRIP1P50238 77 aa11.47□□□□□ -0.57
CSNK1D-225ENST00000584913 URGCP-MRPS24S4R325 110 aa11.47□□□□□ -0.57
CSNK1D-225ENST00000584913 SMIM27A0A1W2PRY6 76 aa11.46□□□□□ -0.57
CSNK1D-225ENST00000584913 FAM231BA6NCW3 169 aa11.46□□□□□ -0.57
CSNK1D-225ENST00000584913 RHODO00212 210 aa11.46□□□□□ -0.57
CSNK1D-225ENST00000584913 MED14OSP0DP75 135 aa11.46□□□□□ -0.57
CSNK1D-225ENST00000584913 SLC25A29Q8N8R3 303 aa11.46□□□□□ -0.57
CSNK1D-225ENST00000584913 SYT8Q8NBV8 401 aa11.46□□□□□ -0.57
CSNK1D-225ENST00000584913 GFRA4Q9GZZ7 299 aa11.46□□□□□ -0.57
CSNK1D-225ENST00000584913 A8MWL6 223 aa11.45□□□□□ -0.58
CSNK1D-225ENST00000584913 DNAH10OSP0CZ25 163 aa11.45□□□□□ -0.58
CSNK1D-225ENST00000584913 RPL19P84098 196 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-225ENST00000584913 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
CSNK1D-225ENST00000584913 TSKUQ8WUA8 353 aa11.45□□□□□ -0.58
CSNK1D-225ENST00000584913 SCRT2Q9NQ03 307 aa11.45□□□□□ -0.58
CSNK1D-225ENST00000584913 XKRY2A2RUG3 117 aa11.44□□□□□ -0.58
CSNK1D-225ENST00000584913 RAB5AP20339 215 aa11.44□□□□□ -0.58
CSNK1D-225ENST00000584913 RPS20P60866 119 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-225ENST00000584913 TNP2Q05952 138 aa11.44□□□□□ -0.58
CSNK1D-225ENST00000584913 C10orf126Q8N4M7 172 aa11.44□□□□□ -0.58
CSNK1D-225ENST00000584913 TGIF2-C20orf24A0A0A6YYL0 155 aa11.43□□□□□ -0.58
CSNK1D-225ENST00000584913 LINC00315P59091 139 aa11.43□□□□□ -0.58
CSNK1D-225ENST00000584913 UFSP1Q6NVU6 142 aa11.43□□□□□ -0.58
CSNK1D-225ENST00000584913 OR2D3Q8NGH3 330 aa11.43□□□□□ -0.58
CSNK1D-225ENST00000584913 NAT8BQ9UHF3 227 aa11.43□□□□□ -0.58
CSNK1D-225ENST00000584913 H3BVH4 76 aa11.42□□□□□ -0.58
CSNK1D-225ENST00000584913 ARMS2P0C7Q2 107 aa11.42□□□□□ -0.58
CSNK1D-225ENST00000584913 EVI2AP22794 236 aa11.42□□□□□ -0.58
CSNK1D-225ENST00000584913 Q6ZRN7 208 aaPredicted RBP11.42□□□□□ -0.58
CSNK1D-225ENST00000584913 ZFP82Q8N141 532 aa11.42□□□□□ -0.58
CSNK1D-225ENST00000584913 LINC00694P0DN24 101 aa11.41□□□□□ -0.58
CSNK1D-225ENST00000584913 COX19Q49B96 90 aa11.41□□□□□ -0.58
CSNK1D-225ENST00000584913 PHLDA3Q9Y5J5 127 aa11.41□□□□□ -0.58
CSNK1D-225ENST00000584913 KIAA1109Q2LD37 5005 aa11.4□□□□□ -0.58
CSNK1D-225ENST00000584913 LOC100131303A0A0U1RQF7 123 aa11.4□□□□□ -0.58
CSNK1D-225ENST00000584913 FOXA3P55318 350 aaPredicted RBP11.4□□□□□ -0.58
CSNK1D-225ENST00000584913 LINC01556Q5JQF7 62 aa11.4□□□□□ -0.58
CSNK1D-225ENST00000584913 LELP1Q5T871 98 aa11.4□□□□□ -0.58
CSNK1D-225ENST00000584913 ZNF575Q86XF7 245 aa11.4□□□□□ -0.58
CSNK1D-225ENST00000584913 WFDC10BQ8IUB3 73 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms