RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 ADCYAP1P18509 176 aa6.56□□□□□ -1.36
UBBP4-201ENST00000583708 NTF3P20783 257 aa6.56□□□□□ -1.36
UBBP4-201ENST00000583708 RAB4BP61018 213 aa6.56□□□□□ -1.36
UBBP4-201ENST00000583708 RNF212Q495C1 297 aa6.56□□□□□ -1.36
UBBP4-201ENST00000583708 CASC10Q5T4H9 136 aa6.56□□□□□ -1.36
UBBP4-201ENST00000583708 ATP5L2Q7Z4Y8 100 aa6.56□□□□□ -1.36
UBBP4-201ENST00000583708 POM121L12Q8N7R1 296 aa6.56□□□□□ -1.36
UBBP4-201ENST00000583708 OR10AG1Q8NH19 301 aa6.56□□□□□ -1.36
UBBP4-201ENST00000583708 PRADC1Q9BSG0 188 aa6.56□□□□□ -1.36
UBBP4-201ENST00000583708 H7C1H1 209 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 PAX4O43316 350 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 IGHV3-53P01767 116 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 CRYGDP07320 174 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 GZMBP10144 247 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 HTN3P15516 51 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 CRYBA4P53673 196 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 RHOHQ15669 191 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 TWIST1Q15672 202 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 MRPL23Q16540 153 aaKnown RBP6.55□□□□□ -1.36
UBBP4-201ENST00000583708 UFSP1Q6NVU6 142 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 KCNIP4Q6PIL6 250 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 RASL11AQ6T310 242 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 NUP35Q8NFH5 326 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 ZNF479Q96JC4 524 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 TPPP3Q9BW30 176 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 DPH3P1Q9H4G8 78 aa6.55□□□□□ -1.36
UBBP4-201ENST00000583708 DYNC2H1Q8NCM8 4307 aaKnown RBP6.55□□□□□ -1.36
UBBP4-201ENST00000583708 TRAV26-1A0A087WT03 109 aa6.54□□□□□ -1.36
UBBP4-201ENST00000583708 IGLL5B9A064 214 aa6.54□□□□□ -1.36
UBBP4-201ENST00000583708 S100PP25815 95 aa6.54□□□□□ -1.36
UBBP4-201ENST00000583708 FAM3BP58499 235 aaPredicted RBP6.54□□□□□ -1.36
UBBP4-201ENST00000583708 COX19Q49B96 90 aa6.54□□□□□ -1.36
UBBP4-201ENST00000583708 CLRN3Q8NCR9 226 aa6.54□□□□□ -1.36
UBBP4-201ENST00000583708 PGLYRP4Q96LB8 373 aa6.54□□□□□ -1.36
UBBP4-201ENST00000583708 TMEM191AQ9H0A3 160 aa6.54□□□□□ -1.36
UBBP4-201ENST00000583708 KIF25-AS1Q9Y6Z4 181 aa6.54□□□□□ -1.36
UBBP4-201ENST00000583708 C7orf77A4D0Y5 90 aa6.53□□□□□ -1.36
UBBP4-201ENST00000583708 PPP1R17O96001 155 aa6.53□□□□□ -1.36
UBBP4-201ENST00000583708 APOC3P02656 99 aa6.53□□□□□ -1.36
UBBP4-201ENST00000583708 HOXA5P20719 270 aa6.53□□□□□ -1.36
UBBP4-201ENST00000583708 TIRAPP58753 221 aa6.53□□□□□ -1.36
UBBP4-201ENST00000583708 TMEM88Q6PEY1 159 aa6.53□□□□□ -1.36
UBBP4-201ENST00000583708 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.53□□□□□ -1.36
UBBP4-201ENST00000583708 DNAJC30Q96LL9 226 aa6.53□□□□□ -1.36
UBBP4-201ENST00000583708 APLNQ9ULZ1 77 aa6.53□□□□□ -1.36
UBBP4-201ENST00000583708 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
UBBP4-201ENST00000583708 P0DMU3 169 aa6.52□□□□□ -1.37
UBBP4-201ENST00000583708 FAM231AP0DMU4 169 aa6.52□□□□□ -1.37
UBBP4-201ENST00000583708 FAM231CP0DMU5 169 aa6.52□□□□□ -1.37
UBBP4-201ENST00000583708 C14orf178Q8N769 122 aaPredicted RBP6.52□□□□□ -1.37
UBBP4-201ENST00000583708 SLC25A29Q8N8R3 303 aa6.52□□□□□ -1.37
UBBP4-201ENST00000583708 GATD1Q8NB37 220 aa6.52□□□□□ -1.37
UBBP4-201ENST00000583708 VSIG2Q96IQ7 327 aa6.52□□□□□ -1.37
UBBP4-201ENST00000583708 F5H697 171 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 K7EQD1 137 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 EVI2AP22794 236 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 CCL18P55774 89 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 LINC00315P59091 139 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 HBBP68871 147 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 RPL36AP83881 106 aaKnown RBP6.51□□□□□ -1.37
UBBP4-201ENST00000583708 TMEM97Q5BJF2 176 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 FAM74A4Q5TZK3 123 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 LGALS9CQ6DKI2 356 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 ZFAND6Q6FIF0 208 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 NEGR1Q7Z3B1 354 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 SLC7A5P1Q8MH63 180 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 RPL36ALQ969Q0 106 aaKnown RBP6.51□□□□□ -1.37
UBBP4-201ENST00000583708 MRAP2Q96G30 205 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 SAMD10Q9BYL1 202 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 JPT2Q9H910 190 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 RPS10P5Q9NQ39 176 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 MSRB1Q9NZV6 116 aa6.51□□□□□ -1.37
UBBP4-201ENST00000583708 TRBV7-3A0A075B6L6 115 aa6.5□□□□□ -1.37
UBBP4-201ENST00000583708 A0A087WWL8 130 aa6.5□□□□□ -1.37
UBBP4-201ENST00000583708 A0A1B0GXF2 115 aa6.5□□□□□ -1.37
UBBP4-201ENST00000583708 PPBPP02775 128 aa6.5□□□□□ -1.37
UBBP4-201ENST00000583708 GYPEP15421 78 aa6.5□□□□□ -1.37
UBBP4-201ENST00000583708 SRIP30626 198 aa6.5□□□□□ -1.37
UBBP4-201ENST00000583708 NIT2Q9NQR4 276 aa6.5□□□□□ -1.37
UBBP4-201ENST00000583708 A0A096LPF7 62 aa6.49□□□□□ -1.37
UBBP4-201ENST00000583708 MUC21A0A0G2JKD1 596 aa6.49□□□□□ -1.37
UBBP4-201ENST00000583708 MUC21A0A140T8X8 626 aa6.49□□□□□ -1.37
UBBP4-201ENST00000583708 K7EP13 123 aa6.49□□□□□ -1.37
UBBP4-201ENST00000583708 M0QY20 66 aa6.49□□□□□ -1.37
UBBP4-201ENST00000583708 ZNF56Q15929 161 aa6.49□□□□□ -1.37
UBBP4-201ENST00000583708 FAM104BQ5XKR9 115 aa6.49□□□□□ -1.37
UBBP4-201ENST00000583708 DAZ4Q86SG3 579 aaKnown RBP6.49□□□□□ -1.37
UBBP4-201ENST00000583708 DAZ3Q9NR90 486 aaKnown RBP6.49□□□□□ -1.37
UBBP4-201ENST00000583708 TENM2Q9NT68 2774 aa6.49□□□□□ -1.37
UBBP4-201ENST00000583708 CSMD3Q7Z407 3707 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 IGHV3-73A0A0B4J1V6 119 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 A0A0J9YY99 117 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 TRBV6-5A0A0K0K1A5 114 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 PHOX2AO14813 284 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 NUDT3O95989 172 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 MT-ND6P03923 174 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 SSTP61278 116 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 Q6ZSN1 163 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 ATP6V0E2Q8NHE4 81 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms