RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 NUDT11Q96G61 164 aa17.12■□□□□ 0.33
TSEN54-209ENST00000583454 SAMD10Q9BYL1 202 aa17.12■□□□□ 0.33
TSEN54-209ENST00000583454 CEBPGP53567 150 aa17.11■□□□□ 0.33
TSEN54-209ENST00000583454 Q6ZSN1 163 aa17.11■□□□□ 0.33
TSEN54-209ENST00000583454 OR10AG1Q8NH19 301 aa17.11■□□□□ 0.33
TSEN54-209ENST00000583454 LY96Q9Y6Y9 160 aa17.11■□□□□ 0.33
TSEN54-209ENST00000583454 IGLC6P0CF74 106 aa17.1■□□□□ 0.33
TSEN54-209ENST00000583454 GZMBP10144 247 aa17.1■□□□□ 0.33
TSEN54-209ENST00000583454 SOHLH1Q5JUK2 328 aa17.1■□□□□ 0.33
TSEN54-209ENST00000583454 NEGR1Q7Z3B1 354 aa17.1■□□□□ 0.33
TSEN54-209ENST00000583454 UPK3BQ9BT76 320 aa17.1■□□□□ 0.33
TSEN54-209ENST00000583454 MRPS16Q9Y3D3 137 aaKnown RBP17.1■□□□□ 0.33
TSEN54-209ENST00000583454 LOC100131303A0A0U1RQF7 123 aa17.09■□□□□ 0.33
TSEN54-209ENST00000583454 CRYGDP07320 174 aa17.09■□□□□ 0.33
TSEN54-209ENST00000583454 SMIM7Q9BQ49 75 aa17.09■□□□□ 0.33
TSEN54-209ENST00000583454 XKRY2A2RUG3 117 aa17.08■□□□□ 0.32
TSEN54-209ENST00000583454 RHODO00212 210 aa17.08■□□□□ 0.32
TSEN54-209ENST00000583454 SRIP30626 198 aa17.08■□□□□ 0.32
TSEN54-209ENST00000583454 RHOHQ15669 191 aa17.08■□□□□ 0.32
TSEN54-209ENST00000583454 LYPD5Q6UWN5 251 aa17.08■□□□□ 0.32
TSEN54-209ENST00000583454 PRADC1Q9BSG0 188 aa17.08■□□□□ 0.32
TSEN54-209ENST00000583454 SMDT1Q9H4I9 107 aa17.08■□□□□ 0.32
TSEN54-209ENST00000583454 APOBP04114 4563 aaKnown RBP17.08■□□□□ 0.32
TSEN54-209ENST00000583454 C9JQL5 133 aa17.07■□□□□ 0.32
TSEN54-209ENST00000583454 RNASE7Q9H1E1 156 aaKnown RBP17.07■□□□□ 0.32
TSEN54-209ENST00000583454 NBDYA0A0U1RRE5 68 aa17.06■□□□□ 0.32
TSEN54-209ENST00000583454 ZNF727A8MUV8 499 aa17.06■□□□□ 0.32
TSEN54-209ENST00000583454 SRSF3P84103 164 aaKnown RBP17.06■□□□□ 0.32
TSEN54-209ENST00000583454 TNP2Q05952 138 aa17.06■□□□□ 0.32
TSEN54-209ENST00000583454 PEA15Q15121 130 aa17.06■□□□□ 0.32
TSEN54-209ENST00000583454 SH2D6Q7Z4S9 175 aa17.06■□□□□ 0.32
TSEN54-209ENST00000583454 FER1L6-AS1Q8NA97 138 aa17.06■□□□□ 0.32
TSEN54-209ENST00000583454 A0A087WWL8 130 aa17.05■□□□□ 0.32
TSEN54-209ENST00000583454 MUC21A0A0G2JKD1 596 aa17.05■□□□□ 0.32
TSEN54-209ENST00000583454 MUC21A0A140T8X8 626 aa17.05■□□□□ 0.32
TSEN54-209ENST00000583454 SPANXN1Q5VSR9 72 aa17.05■□□□□ 0.32
TSEN54-209ENST00000583454 FAM231DQ6ZW35 169 aa17.05■□□□□ 0.32
TSEN54-209ENST00000583454 RPP21Q9H633 154 aaKnown RBP17.05■□□□□ 0.32
TSEN54-209ENST00000583454 Q9H8V8 135 aa17.05■□□□□ 0.32
TSEN54-209ENST00000583454 FAM74A3Q4VXF1 159 aa17.04■□□□□ 0.32
TSEN54-209ENST00000583454 LINC01551Q86U37 167 aa17.04■□□□□ 0.32
TSEN54-209ENST00000583454 KRTAP4-5Q9BYR2 181 aa17.04■□□□□ 0.32
TSEN54-209ENST00000583454 DNAH5Q8TE73 4624 aa17.03■□□□□ 0.32
TSEN54-209ENST00000583454 A0A1W2PPQ1 181 aa17.03■□□□□ 0.32
TSEN54-209ENST00000583454 F2Z2F3 143 aa17.03■□□□□ 0.32
TSEN54-209ENST00000583454 FAM74A4Q5TZK3 123 aa17.03■□□□□ 0.32
TSEN54-209ENST00000583454 RAB14P61106 215 aa17.02■□□□□ 0.32
TSEN54-209ENST00000583454 C14orf178Q8N769 122 aaPredicted RBP17.02■□□□□ 0.32
TSEN54-209ENST00000583454 TPPP3Q9BW30 176 aa17.02■□□□□ 0.32
TSEN54-209ENST00000583454 TIRAPP58753 221 aa17.01■□□□□ 0.31
TSEN54-209ENST00000583454 CACNG7P62955 275 aa17.01■□□□□ 0.31
TSEN54-209ENST00000583454 C6orf223Q8N319 242 aa17.01■□□□□ 0.31
TSEN54-209ENST00000583454 SSTP61278 116 aa17■□□□□ 0.31
TSEN54-209ENST00000583454 TMEM241Q24JQ0 296 aa17■□□□□ 0.31
TSEN54-209ENST00000583454 WDR73Q6P4I2 378 aa17■□□□□ 0.31
TSEN54-209ENST00000583454 LYZL1Q6UWQ5 148 aa17■□□□□ 0.31
TSEN54-209ENST00000583454 Q9UF83 564 aa17■□□□□ 0.31
TSEN54-209ENST00000583454 KIF25-AS1Q9Y6Z4 181 aa17■□□□□ 0.31
TSEN54-209ENST00000583454 GATCO43716 136 aaKnown RBP16.99■□□□□ 0.31
TSEN54-209ENST00000583454 LINC00694P0DN24 101 aa16.99■□□□□ 0.31
TSEN54-209ENST00000583454 CTRLP40313 264 aa16.99■□□□□ 0.31
TSEN54-209ENST00000583454 IFITM2Q01629 132 aa16.99■□□□□ 0.31
TSEN54-209ENST00000583454 ERVFC1-1P60608 527 aa16.98■□□□□ 0.31
TSEN54-209ENST00000583454 RAB4BP61018 213 aa16.98■□□□□ 0.31
TSEN54-209ENST00000583454 CT83Q5H943 113 aa16.98■□□□□ 0.31
TSEN54-209ENST00000583454 KRTAP1-5Q9BYS1 174 aa16.98■□□□□ 0.31
TSEN54-209ENST00000583454 MSRB1Q9NZV6 116 aa16.98■□□□□ 0.31
TSEN54-209ENST00000583454 LINC00315P59091 139 aa16.97■□□□□ 0.31
TSEN54-209ENST00000583454 CLLU1Q5K131 121 aa16.97■□□□□ 0.31
TSEN54-209ENST00000583454 GTSF1Q8WW33 167 aa16.97■□□□□ 0.31
TSEN54-209ENST00000583454 AP1S3Q96PC3 154 aa16.97■□□□□ 0.31
TSEN54-209ENST00000583454 CNFNQ9BYD5 112 aa16.97■□□□□ 0.31
TSEN54-209ENST00000583454 OSTCQ9NRP0 149 aa16.97■□□□□ 0.31
TSEN54-209ENST00000583454 A8MWL6 223 aa16.96■□□□□ 0.31
TSEN54-209ENST00000583454 SIVA1O15304 175 aa16.96■□□□□ 0.31
TSEN54-209ENST00000583454 TRBV10-1A0A0K0K1A3 114 aa16.95■□□□□ 0.3
TSEN54-209ENST00000583454 GAGE12JA6NER3 117 aa16.95■□□□□ 0.3
TSEN54-209ENST00000583454 RPL23P62829 140 aaKnown RBP16.95■□□□□ 0.3
TSEN54-209ENST00000583454 GAGE1Q13065 139 aa16.95■□□□□ 0.3
TSEN54-209ENST00000583454 GAGE4Q13068 117 aa16.95■□□□□ 0.3
TSEN54-209ENST00000583454 GAGE5Q13069 117 aa16.95■□□□□ 0.3
TSEN54-209ENST00000583454 GAGE13Q4V321 117 aa16.95■□□□□ 0.3
TSEN54-209ENST00000583454 ATP6V0E2Q8NHE4 81 aa16.95■□□□□ 0.3
TSEN54-209ENST00000583454 NAT8Q9UHE5 227 aa16.95■□□□□ 0.3
TSEN54-209ENST00000583454 NTF3P20783 257 aa16.94■□□□□ 0.3
TSEN54-209ENST00000583454 FOXA3P55318 350 aaPredicted RBP16.94■□□□□ 0.3
TSEN54-209ENST00000583454 GTSF1LQ9H1H1 148 aa16.94■□□□□ 0.3
TSEN54-209ENST00000583454 SMIM17P0DL12 118 aa16.93■□□□□ 0.3
TSEN54-209ENST00000583454 ZNF56Q15929 161 aa16.93■□□□□ 0.3
TSEN54-209ENST00000583454 TTC32Q5I0X7 151 aa16.93■□□□□ 0.3
TSEN54-209ENST00000583454 ISOC2Q96AB3 205 aa16.93■□□□□ 0.3
TSEN54-209ENST00000583454 C16orf90A8MZG2 172 aa16.92■□□□□ 0.3
TSEN54-209ENST00000583454 OR10G8Q8NGN5 311 aa16.92■□□□□ 0.3
TSEN54-209ENST00000583454 TRGC1P0CF51 173 aa16.91■□□□□ 0.3
TSEN54-209ENST00000583454 WFDC10BQ8IUB3 73 aa16.91■□□□□ 0.3
TSEN54-209ENST00000583454 TSKUQ8WUA8 353 aa16.91■□□□□ 0.3
TSEN54-209ENST00000583454 F5H697 171 aa16.9■□□□□ 0.3
TSEN54-209ENST00000583454 CDK2AP2O75956 126 aa16.9■□□□□ 0.3
TSEN54-209ENST00000583454 EVI2AP22794 236 aa16.9■□□□□ 0.3
TSEN54-209ENST00000583454 LELP1Q5T871 98 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms