RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 SDC4P31431 198 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 POLR2JP52435 117 aaKnown RBP0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 KLKP1Q107X0 134 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 HSD17B12Q53GQ0 312 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 OR8I2Q8N0Y5 310 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 OR4S1Q8NGB4 309 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 TMEM14BQ9NUH8 114 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 CALML5Q9NZT1 146 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 HSPB11Q9Y547 144 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 KMT2AQ03164 3969 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 OVOS2A0A0G2JMS6 1433 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 PTPRGP23470 1445 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 CHD9Q3L8U1 2897 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 ZCCHC6Q5VYS8 1495 aaKnown RBP0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 LRP5O75197 1615 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 RELNP78509 3460 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 ABCA4P78363 2273 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 CNOT1A5YKK6 2376 aaKnown RBP0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 BLMP54132 1417 aaPredicted RBP0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 MYO7AQ13402 2215 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 A0A096LNT2 108 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 TRAV17A0A0B4J275 112 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 TRBV10-1A0A0K0K1A3 114 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 J3KT08 172 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 PAEPP09466 180 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 MT4P47944 62 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 RPS28P62857 69 aaKnown RBP0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 PLGLB1Q02325 96 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 KRTAP19-6Q3LI70 58 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 Q5XG85 94 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 PPP1R1CQ8WVI7 109 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 DSCR8Q96T75 97 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 VPS25Q9BRG1 176 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 METTL1Q9UBP6 276 aaKnown RBP0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 GINS2Q9Y248 185 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 MYH13Q9UKX3 1938 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 KIF13AQ9H1H9 1805 aa0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 HRNRQ86YZ3 2850 aaPredicted RBP0.08□□□□□ -2.4
SMCHD1-207ENST00000581711 CPDO75976 1380 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 KDM5CP41229 1560 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 RANBP2P49792 3224 aaKnown RBP0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 KDM6BO15054 1643 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 LAMA1P25391 3075 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 TRAV36DV7A0A075B6V5 113 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 TEX49A0A1B0GTD5 131 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 MCRIP1C9JLW8 97 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 SMIM24O75264 130 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 MPC1LP0DKB6 136 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 AKR1D1P51857 326 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 TMEM91Q6ZNR0 172 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 SLC25A26Q70HW3 274 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 VMO1Q7Z5L0 202 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 PPDPFLQ8WWR9 84 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 SLC35B3Q9H1N7 401 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 COA4Q9NYJ1 87 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 NDUFAF1Q9Y375 327 aa0.07□□□□□ -2.4
SMCHD1-207ENST00000581711 CASZ1Q86V15 1759 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 CADP27708 2225 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 ARHGAP31Q2M1Z3 1444 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 CEP290O15078 2479 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 CDK5RAP2Q96SN8 1893 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 PLXNA1Q9UIW2 1896 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 PDE4DIPQ5VU43 2346 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 TRAV12-2A0A075B6T6 113 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 TRAV2A0A0B4J234 112 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 CXorf51AA0A1B0GTR3 108 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 A0A1B0GX51 115 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 GNG14A0A1W2PPG7 69 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 C9JAW5 83 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 H0YJX3 145 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 DEGS1O15121 323 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 TNFSF15O95150 251 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 OR2H2O95918 312 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 MT-ND4LP03901 98 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 SCTP09683 121 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 PYYP10082 97 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 CMPK1P30085 196 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 OR8B8Q15620 311 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 TMEM244Q5VVB8 128 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 TCTE3Q8IZS6 198 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 MAGOHBQ96A72 148 aaKnown RBP0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 TMEM141Q96I45 108 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 BANF2Q9H503 90 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 PROK2Q9HC23 129 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 SPANXA1Q9NS26 97 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 SPANXCQ9NY87 97 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 BET1LQ9NYM9 111 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 TAS2R8Q9NYW2 309 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 DNAJC15Q9Y5T4 150 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 TNS1Q9HBL0 1735 aaKnown RBP0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 ZFHX3Q15911 3703 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 F5P12259 2224 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 ERCC6L2Q5T890 1561 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 DOCK11Q5JSL3 2073 aa0.06□□□□□ -2.4
SMCHD1-207ENST00000581711 NBPF19A0A087WUL8 3843 aa0.05□□□□□ -2.4
SMCHD1-207ENST00000581711 ZNF142P52746 1687 aaPredicted RBP0.05□□□□□ -2.4
SMCHD1-207ENST00000581711 UHRF1BP1LA0JNW5 1464 aa0.05□□□□□ -2.4
SMCHD1-207ENST00000581711 BORCS7-ASMTA0A0B4J1R7 106 aa0.05□□□□□ -2.4
SMCHD1-207ENST00000581711 A0A1B0GW64 132 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms