RNA–Protein interactions for RNA: ENST00000581391.5

CUEDC1-209, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-209ENST00000581391 SFRP2Q96HF1 295 aa9.28□□□□□ -0.92
CUEDC1-209ENST00000581391 PRADC1Q9BSG0 188 aa9.28□□□□□ -0.92
CUEDC1-209ENST00000581391 K7EN84 100 aa9.27□□□□□ -0.93
CUEDC1-209ENST00000581391 CEBPGP53567 150 aa9.27□□□□□ -0.93
CUEDC1-209ENST00000581391 RHOHQ15669 191 aa9.27□□□□□ -0.93
CUEDC1-209ENST00000581391 TOR2AQ5JU69 321 aa9.27□□□□□ -0.93
CUEDC1-209ENST00000581391 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
CUEDC1-209ENST00000581391 ZFP2Q6ZN57 461 aa9.27□□□□□ -0.93
CUEDC1-209ENST00000581391 OR2D3Q8NGH3 330 aa9.27□□□□□ -0.93
CUEDC1-209ENST00000581391 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
CUEDC1-209ENST00000581391 CIDEAO60543 219 aa9.26□□□□□ -0.93
CUEDC1-209ENST00000581391 ZFP82Q8N141 532 aa9.26□□□□□ -0.93
CUEDC1-209ENST00000581391 NUDT10Q8NFP7 164 aa9.26□□□□□ -0.93
CUEDC1-209ENST00000581391 DAZAP1Q96EP5 407 aaKnown RBP9.26□□□□□ -0.93
CUEDC1-209ENST00000581391 NUDT11Q96G61 164 aa9.26□□□□□ -0.93
CUEDC1-209ENST00000581391 TPPP3Q9BW30 176 aa9.26□□□□□ -0.93
CUEDC1-209ENST00000581391 MSRB1Q9NZV6 116 aa9.26□□□□□ -0.93
CUEDC1-209ENST00000581391 SNAI2O43623 268 aa9.25□□□□□ -0.93
CUEDC1-209ENST00000581391 SOHLH1Q5JUK2 328 aa9.25□□□□□ -0.93
CUEDC1-209ENST00000581391 RNASE7Q9H1E1 156 aaKnown RBP9.25□□□□□ -0.93
CUEDC1-209ENST00000581391 CXCL1P09341 107 aa9.24□□□□□ -0.93
CUEDC1-209ENST00000581391 MED14OSP0DP75 135 aa9.24□□□□□ -0.93
CUEDC1-209ENST00000581391 TAGLN2P37802 199 aaKnown RBP9.24□□□□□ -0.93
CUEDC1-209ENST00000581391 LINC00315P59091 139 aa9.24□□□□□ -0.93
CUEDC1-209ENST00000581391 SPANXN1Q5VSR9 72 aa9.24□□□□□ -0.93
CUEDC1-209ENST00000581391 Q8N3U1 123 aa9.24□□□□□ -0.93
CUEDC1-209ENST00000581391 ATP6V0E2Q8NHE4 81 aa9.24□□□□□ -0.93
CUEDC1-209ENST00000581391 EIF5A2Q9GZV4 153 aaKnown RBP9.24□□□□□ -0.93
CUEDC1-209ENST00000581391 P01737 135 aa9.23□□□□□ -0.93
CUEDC1-209ENST00000581391 OR5AL1P0C617 328 aa9.23□□□□□ -0.93
CUEDC1-209ENST00000581391 IGLC6P0CF74 106 aa9.23□□□□□ -0.93
CUEDC1-209ENST00000581391 LINC00694P0DN24 101 aa9.23□□□□□ -0.93
CUEDC1-209ENST00000581391 A0A1W2PPQ1 181 aa9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 C9JQL5 133 aa9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 SRP19P09132 144 aaKnown RBP9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 SRSF3P84103 164 aaKnown RBP9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 TTC32Q5I0X7 151 aa9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 OR10J3Q5JRS4 329 aa9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 TEX261Q6UWH6 196 aa9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 FER1L6-AS1Q8NA97 138 aa9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 FAM210AQ96ND0 272 aa9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 GTSF1LQ9H1H1 148 aa9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 LY96Q9Y6Y9 160 aa9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 KIF25-AS1Q9Y6Z4 181 aa9.22□□□□□ -0.93
CUEDC1-209ENST00000581391 KIAA1109Q2LD37 5005 aa9.21□□□□□ -0.93
CUEDC1-209ENST00000581391 TMEM250H0YL14 139 aa9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 RHODO00212 210 aa9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 IGHV3-30P01768 117 aa9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 IGHV3-33P01772 117 aa9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 DNAH10OSP0CZ25 163 aa9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 IGHV3-30-3P0DP02 117 aa9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 IGHV3-30-5P0DP03 117 aa9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 TIRAPP58753 221 aa9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 LYZL1Q6UWQ5 148 aa9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 Q6ZRN7 208 aaPredicted RBP9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 SH2D6Q7Z4S9 175 aa9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 SMIM12Q96EX1 92 aa9.21□□□□□ -0.94
CUEDC1-209ENST00000581391 IGHV3-38A0A0C4DH36 116 aa9.2□□□□□ -0.94
CUEDC1-209ENST00000581391 FUSP35637 526 aaKnown RBP eCLIP9.2□□□□□ -0.94
CUEDC1-209ENST00000581391 RPS20P60866 119 aaKnown RBP9.2□□□□□ -0.94
CUEDC1-209ENST00000581391 ZNF56Q15929 161 aa9.2□□□□□ -0.94
CUEDC1-209ENST00000581391 LELP1Q5T871 98 aa9.2□□□□□ -0.94
CUEDC1-209ENST00000581391 DNAH5Q8TE73 4624 aa9.2□□□□□ -0.94
CUEDC1-209ENST00000581391 F5H697 171 aa9.19□□□□□ -0.94
CUEDC1-209ENST00000581391 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
CUEDC1-209ENST00000581391 RPP21Q9H633 154 aaKnown RBP9.19□□□□□ -0.94
CUEDC1-209ENST00000581391 LRP1BQ9NZR2 4599 aa9.19□□□□□ -0.94
CUEDC1-209ENST00000581391 TRAV8-6A0A0B4J262 113 aa9.18□□□□□ -0.94
CUEDC1-209ENST00000581391 NTF3P20783 257 aa9.18□□□□□ -0.94
CUEDC1-209ENST00000581391 EVI2AP22794 236 aa9.18□□□□□ -0.94
CUEDC1-209ENST00000581391 RAB4BP61018 213 aa9.18□□□□□ -0.94
CUEDC1-209ENST00000581391 GTSF1Q8WW33 167 aa9.18□□□□□ -0.94
CUEDC1-209ENST00000581391 SMIM7Q9BQ49 75 aa9.18□□□□□ -0.94
CUEDC1-209ENST00000581391 BIN3Q9NQY0 253 aa9.18□□□□□ -0.94
CUEDC1-209ENST00000581391 ZNF727A8MUV8 499 aa9.17□□□□□ -0.94
CUEDC1-209ENST00000581391 GATCO43716 136 aaKnown RBP9.17□□□□□ -0.94
CUEDC1-209ENST00000581391 MGPP08493 103 aa9.17□□□□□ -0.94
CUEDC1-209ENST00000581391 FOXA3P55318 350 aaPredicted RBP9.17□□□□□ -0.94
CUEDC1-209ENST00000581391 UBE2D3P61077 147 aa9.17□□□□□ -0.94
CUEDC1-209ENST00000581391 UBE2D2P62837 147 aa9.17□□□□□ -0.94
CUEDC1-209ENST00000581391 TRBV7-3A0A075B6L6 115 aa9.16□□□□□ -0.94
CUEDC1-209ENST00000581391 TRAV9-2A0A087WT02 112 aa9.16□□□□□ -0.94
CUEDC1-209ENST00000581391 KRTAP10-2P60368 255 aa9.16□□□□□ -0.94
CUEDC1-209ENST00000581391 CACNG7P62955 275 aa9.16□□□□□ -0.94
CUEDC1-209ENST00000581391 LINC01556Q5JQF7 62 aa9.16□□□□□ -0.94
CUEDC1-209ENST00000581391 LINC01551Q86U37 167 aa9.16□□□□□ -0.94
CUEDC1-209ENST00000581391 DEFB104AQ8WTQ1 72 aa9.16□□□□□ -0.94
CUEDC1-209ENST00000581391 HERC2O95714 4834 aa9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 TRBV10-1A0A0K0K1A3 114 aa9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 XKRY2A2RUG3 117 aa9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 F2Z2F3 143 aa9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 SMIM17P0DL12 118 aa9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 ERVFC1-1P60608 527 aa9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 RPL36AP83881 106 aaKnown RBP9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 TWIST1Q15672 202 aa9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 SUMO4Q6EEV6 95 aa9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 SPATA12Q7Z6I5 190 aa9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 DAZ4Q86SG3 579 aaKnown RBP9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 OR10G8Q8NGN5 311 aa9.15□□□□□ -0.94
CUEDC1-209ENST00000581391 RPL36ALQ969Q0 106 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms