RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 TRAV10A0A0B4J240 114 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 A0A1B0GUT8 65 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 A0A1B0GW15 77 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 H3BNG1 76 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 RS1O15537 224 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 APOC3P02656 99 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 TRGC1P0CF51 173 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 DEFB130BP0DP73 79 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 DEFB130AP0DP74 79 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 NANOS2P60321 138 aaKnown RBP7.35□□□□□ -1.23
CCDC47-203ENST00000580986 CFAP126Q5VTH2 177 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 POM121L12Q8N7R1 296 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 NUP35Q8NFH5 326 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 BORCS7Q96B45 105 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 AP1S3Q96PC3 154 aa7.35□□□□□ -1.23
CCDC47-203ENST00000580986 C7orf77A4D0Y5 90 aa7.34□□□□□ -1.23
CCDC47-203ENST00000580986 NUPR2A6NF83 97 aa7.34□□□□□ -1.23
CCDC47-203ENST00000580986 M0R381 172 aa7.34□□□□□ -1.23
CCDC47-203ENST00000580986 NTF3P20783 257 aa7.34□□□□□ -1.23
CCDC47-203ENST00000580986 LCE1DQ5T752 114 aa7.34□□□□□ -1.23
CCDC47-203ENST00000580986 UFSP1Q6NVU6 142 aa7.34□□□□□ -1.23
CCDC47-203ENST00000580986 ATP5L2Q7Z4Y8 100 aa7.34□□□□□ -1.23
CCDC47-203ENST00000580986 OR4C5Q8NGB2 326 aa7.34□□□□□ -1.23
CCDC47-203ENST00000580986 MUC7Q8TAX7 377 aa7.34□□□□□ -1.23
CCDC47-203ENST00000580986 NACAE9PAV3 2078 aa7.33□□□□□ -1.24
CCDC47-203ENST00000580986 DEFB131BA0A096LNP1 70 aa7.33□□□□□ -1.24
CCDC47-203ENST00000580986 TCTAP57738 103 aa7.33□□□□□ -1.24
CCDC47-203ENST00000580986 RIGQ13278 110 aa7.33□□□□□ -1.24
CCDC47-203ENST00000580986 PHLDA1Q8WV24 401 aaPredicted RBP7.33□□□□□ -1.24
CCDC47-203ENST00000580986 FRZBQ92765 325 aa7.33□□□□□ -1.24
CCDC47-203ENST00000580986 TPPP3Q9BW30 176 aa7.33□□□□□ -1.24
CCDC47-203ENST00000580986 TRBV6-4A0A1B0GX49 114 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 C3orf84H3BNL1 204 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 S100A8P05109 93 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 CRYGDP07320 174 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 FHL2Q14192 279 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 KCNIP4Q6PIL6 250 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 CEMP1Q6PRD7 247 aaPredicted RBP7.32□□□□□ -1.24
CCDC47-203ENST00000580986 RASL11AQ6T310 242 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 GATD1Q8NB37 220 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 ZNF479Q96JC4 524 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 BTF3L4Q96K17 158 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 PGLYRP4Q96LB8 373 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 PRO0255Q9UI72 69 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 KIF25-AS1Q9Y6Z4 181 aa7.32□□□□□ -1.24
CCDC47-203ENST00000580986 DNAH7Q8WXX0 4024 aa7.31□□□□□ -1.24
CCDC47-203ENST00000580986 A0A1B0GXF2 115 aa7.31□□□□□ -1.24
CCDC47-203ENST00000580986 SMIM17P0DL12 118 aa7.31□□□□□ -1.24
CCDC47-203ENST00000580986 GATA1P15976 413 aaPredicted RBP7.31□□□□□ -1.24
CCDC47-203ENST00000580986 S100PP25815 95 aa7.31□□□□□ -1.24
CCDC47-203ENST00000580986 TWIST1Q15672 202 aa7.31□□□□□ -1.24
CCDC47-203ENST00000580986 SMIM15Q7Z3B0 74 aa7.31□□□□□ -1.24
CCDC47-203ENST00000580986 KRTAP4-7Q9BYR0 210 aa7.31□□□□□ -1.24
CCDC47-203ENST00000580986 TMEM191AQ9H0A3 160 aa7.31□□□□□ -1.24
CCDC47-203ENST00000580986 DPH3P1Q9H4G8 78 aa7.31□□□□□ -1.24
CCDC47-203ENST00000580986 RPS10P5Q9NQ39 176 aa7.31□□□□□ -1.24
CCDC47-203ENST00000580986 KLK5Q9Y337 293 aaPredicted RBP7.31□□□□□ -1.24
CCDC47-203ENST00000580986 TRGV4A0A0C4DH28 118 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 TRBV10-1A0A0K0K1A3 114 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 IGHV3-53P01767 116 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 HOXA5P20719 270 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 CRYBA4P53673 196 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 LINC00315P59091 139 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 RAB4BP61018 213 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 HBBP68871 147 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 C15orf53Q8NAA6 179 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 JPT2Q9H910 190 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 MSRB1Q9NZV6 116 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 HHLA3Q9XRX5 114 aa7.3□□□□□ -1.24
CCDC47-203ENST00000580986 MUC21A0A0G2JKD1 596 aa7.29□□□□□ -1.24
CCDC47-203ENST00000580986 MUC21A0A140T8X8 626 aa7.29□□□□□ -1.24
CCDC47-203ENST00000580986 F5H768 121 aa7.29□□□□□ -1.24
CCDC47-203ENST00000580986 EVI2AP22794 236 aa7.29□□□□□ -1.24
CCDC47-203ENST00000580986 FAM3BP58499 235 aaPredicted RBP7.29□□□□□ -1.24
CCDC47-203ENST00000580986 RHOHQ15669 191 aa7.29□□□□□ -1.24
CCDC47-203ENST00000580986 C14orf178Q8N769 122 aaPredicted RBP7.29□□□□□ -1.24
CCDC47-203ENST00000580986 SAMD10Q9BYL1 202 aa7.29□□□□□ -1.24
CCDC47-203ENST00000580986 CSMD3Q7Z407 3707 aa7.28□□□□□ -1.24
CCDC47-203ENST00000580986 A0A087WWL8 130 aa7.28□□□□□ -1.24
CCDC47-203ENST00000580986 H7C1H1 209 aa7.28□□□□□ -1.24
CCDC47-203ENST00000580986 K7EQD1 137 aa7.28□□□□□ -1.24
CCDC47-203ENST00000580986 S100A1P23297 94 aa7.28□□□□□ -1.24
CCDC47-203ENST00000580986 COX19Q49B96 90 aa7.28□□□□□ -1.24
CCDC47-203ENST00000580986 FAM74A4Q5TZK3 123 aa7.28□□□□□ -1.24
CCDC47-203ENST00000580986 SLC25A29Q8N8R3 303 aa7.28□□□□□ -1.24
CCDC47-203ENST00000580986 PRADC1Q9BSG0 188 aa7.28□□□□□ -1.24
CCDC47-203ENST00000580986 TRBV24-1A0A075B6N3 115 aa7.27□□□□□ -1.25
CCDC47-203ENST00000580986 TRAV26-1A0A087WT03 109 aa7.27□□□□□ -1.25
CCDC47-203ENST00000580986 HTN3P15516 51 aa7.27□□□□□ -1.25
CCDC47-203ENST00000580986 TMEM88Q6PEY1 159 aa7.27□□□□□ -1.25
CCDC47-203ENST00000580986 SH2D6Q7Z4S9 175 aa7.27□□□□□ -1.25
CCDC47-203ENST00000580986 VSIG2Q96IQ7 327 aa7.27□□□□□ -1.25
CCDC47-203ENST00000580986 DYNC2H1Q8NCM8 4307 aaKnown RBP7.26□□□□□ -1.25
CCDC47-203ENST00000580986 M0QY20 66 aa7.26□□□□□ -1.25
CCDC47-203ENST00000580986 ELOBQ15370 118 aa7.26□□□□□ -1.25
CCDC47-203ENST00000580986 ZNF56Q15929 161 aa7.26□□□□□ -1.25
CCDC47-203ENST00000580986 CASC10Q5T4H9 136 aa7.26□□□□□ -1.25
CCDC47-203ENST00000580986 FAM104BQ5XKR9 115 aa7.26□□□□□ -1.25
CCDC47-203ENST00000580986 MRPL54Q6P161 138 aaKnown RBP7.26□□□□□ -1.25
CCDC47-203ENST00000580986 ATRAIDQ6UW56 229 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms