RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 FAM74A4Q5TZK3 123 aa5.53□□□□□ -1.52
CASC3-206ENST00000579238 OR11H4Q8NGC9 324 aa5.53□□□□□ -1.52
CASC3-206ENST00000579238 S100ZQ8WXG8 99 aa5.53□□□□□ -1.52
CASC3-206ENST00000579238 ARL2-SNX15V9GYD0 113 aa5.53□□□□□ -1.52
CASC3-206ENST00000579238 A0A087WWL8 130 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 A0A1W2PRE2 83 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 KRBOX1C9JBD0 128 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 TMEM262E9PQX1 116 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 UPK1BO75841 260 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 MBP02144 154 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 CRPP02741 224 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 ARMS2P0C7Q2 107 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 UBE2D3P61077 147 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 UBE2D2P62837 147 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 RPL36AP83881 106 aaKnown RBP5.52□□□□□ -1.53
CASC3-206ENST00000579238 SERF2P84101 59 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 ENHOQ6UWT2 76 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 RPL36ALQ969Q0 106 aaKnown RBP5.52□□□□□ -1.53
CASC3-206ENST00000579238 SFRP2Q96HF1 295 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 MARVELD1Q9BSK0 173 aa5.52□□□□□ -1.53
CASC3-206ENST00000579238 PSMG3Q9BT73 122 aaPredicted RBP5.52□□□□□ -1.53
CASC3-206ENST00000579238 TRBV7-3A0A075B6L6 115 aa5.51□□□□□ -1.53
CASC3-206ENST00000579238 TRBV6-8A0A0A6YYG3 113 aa5.51□□□□□ -1.53
CASC3-206ENST00000579238 USP17L23D6RBM5 183 aa5.51□□□□□ -1.53
CASC3-206ENST00000579238 ATP6V0CP27449 155 aa5.51□□□□□ -1.53
CASC3-206ENST00000579238 DGAT2L7PQ6IED9 249 aa5.51□□□□□ -1.53
CASC3-206ENST00000579238 Q6ZRU5 148 aa5.51□□□□□ -1.53
CASC3-206ENST00000579238 C15orf54Q8N8G6 183 aa5.51□□□□□ -1.53
CASC3-206ENST00000579238 C9orf163Q8N9P6 203 aa5.51□□□□□ -1.53
CASC3-206ENST00000579238 HSD17B11Q8NBQ5 300 aa5.51□□□□□ -1.53
CASC3-206ENST00000579238 ACTR3CQ9C0K3 210 aaPredicted RBP5.51□□□□□ -1.53
CASC3-206ENST00000579238 PHLDA3Q9Y5J5 127 aa5.51□□□□□ -1.53
CASC3-206ENST00000579238 GRIFINA4D1Z8 144 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 M0R036 132 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 M0R381 172 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 PEX7O00628 323 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 SH2D1AO60880 128 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 IFNA7P01567 189 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 HLA-DQA1P01909 254 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 ANGP03950 147 aaKnown RBP5.5□□□□□ -1.53
CASC3-206ENST00000579238 PRSS1P07477 247 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 TPT1P13693 172 aaKnown RBP5.5□□□□□ -1.53
CASC3-206ENST00000579238 CRIP1P50238 77 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 PKIAP61925 76 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 IFITM3Q01628 133 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 MPV17L2Q567V2 206 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 FAM162BQ5T6X4 162 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 COX8CQ7Z4L0 72 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 Q86TA4 180 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 ZFP82Q8N141 532 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 OR10G8Q8NGN5 311 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 ZC2HC1AQ96GY0 325 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 TNFSF18Q9UNG2 199 aa5.5□□□□□ -1.53
CASC3-206ENST00000579238 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.5□□□□□ -1.53
CASC3-206ENST00000579238 RPL19P84098 196 aaKnown RBP5.49□□□□□ -1.53
CASC3-206ENST00000579238 MIAQ16674 131 aa5.49□□□□□ -1.53
CASC3-206ENST00000579238 HIST1H2BAQ96A08 127 aa5.49□□□□□ -1.53
CASC3-206ENST00000579238 NKX6-2Q9C056 277 aaPredicted RBP5.49□□□□□ -1.53
CASC3-206ENST00000579238 ZFP30Q9Y2G7 519 aa5.49□□□□□ -1.53
CASC3-206ENST00000579238 A0A0D9SG52 128 aa5.48□□□□□ -1.53
CASC3-206ENST00000579238 PANO1I0J062 215 aa5.48□□□□□ -1.53
CASC3-206ENST00000579238 UBE2G2P60604 165 aa5.48□□□□□ -1.53
CASC3-206ENST00000579238 RAB4BP61018 213 aa5.48□□□□□ -1.53
CASC3-206ENST00000579238 ZNF674Q2M3X9 581 aa5.48□□□□□ -1.53
CASC3-206ENST00000579238 LINC01559Q495D7 138 aa5.48□□□□□ -1.53
CASC3-206ENST00000579238 SDIM1Q6ZPB5 146 aa5.48□□□□□ -1.53
CASC3-206ENST00000579238 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.48□□□□□ -1.53
CASC3-206ENST00000579238 NEXN-AS1Q8NBZ9 246 aa5.48□□□□□ -1.53
CASC3-206ENST00000579238 AQP10Q96PS8 301 aa5.48□□□□□ -1.53
CASC3-206ENST00000579238 CHCHD5Q9BSY4 110 aa5.48□□□□□ -1.53
CASC3-206ENST00000579238 TNXBP22105 4242 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 TMSB15BA0A087X1C1 80 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 CTXND1A0A1B0GTU2 59 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 FAM74A7A6NL05 159 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 PTTG1O95997 202 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 CIRBPQ14011 172 aaKnown RBP5.47□□□□□ -1.53
CASC3-206ENST00000579238 ZNF726P1Q15940 193 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 TMEM97Q5BJF2 176 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 PRR27Q6MZM9 219 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 KRTAP26-1Q6PEX3 210 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 CLRN3Q8NCR9 226 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 FMC1Q96HJ9 113 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 PRR34Q9NV39 138 aa5.47□□□□□ -1.53
CASC3-206ENST00000579238 TRBV6-1A0A0K0K1D8 114 aa5.46□□□□□ -1.54
CASC3-206ENST00000579238 DEFA1P59665 94 aa5.46□□□□□ -1.54
CASC3-206ENST00000579238 DEFA3P59666 94 aa5.46□□□□□ -1.54
CASC3-206ENST00000579238 UBE2G1P62253 170 aa5.46□□□□□ -1.54
CASC3-206ENST00000579238 CNBPP62633 177 aaKnown RBP5.46□□□□□ -1.54
CASC3-206ENST00000579238 RBX1P62877 108 aa5.46□□□□□ -1.54
CASC3-206ENST00000579238 ZNF56Q15929 161 aa5.46□□□□□ -1.54
CASC3-206ENST00000579238 LTAP01374 205 aa5.45□□□□□ -1.54
CASC3-206ENST00000579238 CXCL1P09341 107 aa5.45□□□□□ -1.54
CASC3-206ENST00000579238 CLPSL2Q6UWE3 100 aa5.45□□□□□ -1.54
CASC3-206ENST00000579238 NTM-AS1Q6ZSK4 140 aa5.45□□□□□ -1.54
CASC3-206ENST00000579238 LINC00269Q8N2A0 174 aa5.45□□□□□ -1.54
CASC3-206ENST00000579238 RNF185Q96GF1 192 aa5.45□□□□□ -1.54
CASC3-206ENST00000579238 TCEAL7Q9BRU2 100 aa5.45□□□□□ -1.54
CASC3-206ENST00000579238 VAX2Q9UIW0 290 aa5.45□□□□□ -1.54
CASC3-206ENST00000579238 TRBV25-1A0A075B6N4 114 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms