RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 BTF3P20290 206 aaKnown RBP9.89□□□□□ -0.83
MKS1-207ENST00000578789 C6orf223Q8N319 242 aa9.89□□□□□ -0.83
MKS1-207ENST00000578789 OR10AG1Q8NH19 301 aa9.89□□□□□ -0.83
MKS1-207ENST00000578789 DAZAP1Q96EP5 407 aaKnown RBP9.89□□□□□ -0.83
MKS1-207ENST00000578789 A0A1B0GVY2 172 aa9.88□□□□□ -0.83
MKS1-207ENST00000578789 CRYGDP07320 174 aa9.88□□□□□ -0.83
MKS1-207ENST00000578789 RPS20P60866 119 aaKnown RBP9.88□□□□□ -0.83
MKS1-207ENST00000578789 TOR2AQ5JU69 321 aa9.88□□□□□ -0.83
MKS1-207ENST00000578789 P01737 135 aa9.87□□□□□ -0.83
MKS1-207ENST00000578789 IGLC6P0CF74 106 aa9.87□□□□□ -0.83
MKS1-207ENST00000578789 FAM74A4Q5TZK3 123 aa9.87□□□□□ -0.83
MKS1-207ENST00000578789 OR2D3Q8NGH3 330 aa9.87□□□□□ -0.83
MKS1-207ENST00000578789 FAM210AQ96ND0 272 aa9.87□□□□□ -0.83
MKS1-207ENST00000578789 A0A087WWL8 130 aa9.86□□□□□ -0.83
MKS1-207ENST00000578789 TEX261Q6UWH6 196 aa9.86□□□□□ -0.83
MKS1-207ENST00000578789 WFDC10BQ8IUB3 73 aa9.86□□□□□ -0.83
MKS1-207ENST00000578789 C14orf178Q8N769 122 aaPredicted RBP9.86□□□□□ -0.83
MKS1-207ENST00000578789 XKRY2A2RUG3 117 aa9.85□□□□□ -0.83
MKS1-207ENST00000578789 K7EN84 100 aa9.85□□□□□ -0.83
MKS1-207ENST00000578789 DNAH10OSP0CZ25 163 aa9.85□□□□□ -0.83
MKS1-207ENST00000578789 SPANXN1Q5VSR9 72 aa9.85□□□□□ -0.83
MKS1-207ENST00000578789 FER1L6-AS1Q8NA97 138 aa9.85□□□□□ -0.83
MKS1-207ENST00000578789 ATP6V0E2Q8NHE4 81 aa9.85□□□□□ -0.83
MKS1-207ENST00000578789 OCC1Q8TAD7 63 aa9.85□□□□□ -0.83
MKS1-207ENST00000578789 GAGE12JA6NER3 117 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 K7EP13 123 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 GZMBP10144 247 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 GAGE1Q13065 139 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 GAGE4Q13068 117 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 GAGE5Q13069 117 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 GAGE13Q4V321 117 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 LELP1Q5T871 98 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 NUDT10Q8NFP7 164 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 NUDT11Q96G61 164 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 EIF5A2Q9GZV4 153 aaKnown RBP9.84□□□□□ -0.83
MKS1-207ENST00000578789 GTSF1LQ9H1H1 148 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 Q9UF83 564 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 LY96Q9Y6Y9 160 aa9.84□□□□□ -0.83
MKS1-207ENST00000578789 MUC21A0A0G2JKD1 596 aa9.83□□□□□ -0.84
MKS1-207ENST00000578789 TRBV10-1A0A0K0K1A3 114 aa9.83□□□□□ -0.84
MKS1-207ENST00000578789 MUC21A0A140T8X8 626 aa9.83□□□□□ -0.84
MKS1-207ENST00000578789 CACNG7P62955 275 aa9.83□□□□□ -0.84
MKS1-207ENST00000578789 AP1S3Q96PC3 154 aa9.83□□□□□ -0.84
MKS1-207ENST00000578789 RPP21Q9H633 154 aaKnown RBP9.83□□□□□ -0.84
MKS1-207ENST00000578789 F2Z2F3 143 aa9.82□□□□□ -0.84
MKS1-207ENST00000578789 SRP19P09132 144 aaKnown RBP9.82□□□□□ -0.84
MKS1-207ENST00000578789 CTRLP40313 264 aa9.82□□□□□ -0.84
MKS1-207ENST00000578789 LINC00315P59091 139 aa9.82□□□□□ -0.84
MKS1-207ENST00000578789 RAB4BP61018 213 aa9.82□□□□□ -0.84
MKS1-207ENST00000578789 TNP2Q05952 138 aa9.82□□□□□ -0.84
MKS1-207ENST00000578789 FAM231DQ6ZW35 169 aa9.82□□□□□ -0.84
MKS1-207ENST00000578789 RNASE7Q9H1E1 156 aaKnown RBP9.82□□□□□ -0.84
MKS1-207ENST00000578789 KIF25-AS1Q9Y6Z4 181 aa9.82□□□□□ -0.84
MKS1-207ENST00000578789 PKD1P98161 4303 aa9.82□□□□□ -0.84
MKS1-207ENST00000578789 TRAV8-6A0A0B4J262 113 aa9.81□□□□□ -0.84
MKS1-207ENST00000578789 EVI2AP22794 236 aa9.81□□□□□ -0.84
MKS1-207ENST00000578789 CEBPGP53567 150 aa9.81□□□□□ -0.84
MKS1-207ENST00000578789 ZNF56Q15929 161 aa9.81□□□□□ -0.84
MKS1-207ENST00000578789 LINC01556Q5JQF7 62 aa9.81□□□□□ -0.84
MKS1-207ENST00000578789 OR10G8Q8NGN5 311 aa9.81□□□□□ -0.84
MKS1-207ENST00000578789 SMIM7Q9BQ49 75 aa9.81□□□□□ -0.84
MKS1-207ENST00000578789 TPPP3Q9BW30 176 aa9.81□□□□□ -0.84
MKS1-207ENST00000578789 TRAV9-2A0A087WT02 112 aa9.8□□□□□ -0.84
MKS1-207ENST00000578789 IGHV3-38A0A0C4DH36 116 aa9.8□□□□□ -0.84
MKS1-207ENST00000578789 OR10J3Q5JRS4 329 aa9.8□□□□□ -0.84
MKS1-207ENST00000578789 WDR73Q6P4I2 378 aa9.8□□□□□ -0.84
MKS1-207ENST00000578789 Q6ZRN7 208 aaPredicted RBP9.8□□□□□ -0.84
MKS1-207ENST00000578789 C10orf126Q8N4M7 172 aa9.8□□□□□ -0.84
MKS1-207ENST00000578789 CNFNQ9BYD5 112 aa9.8□□□□□ -0.84
MKS1-207ENST00000578789 DNAH11Q96DT5 4516 aa9.79□□□□□ -0.84
MKS1-207ENST00000578789 UBE2D3P61077 147 aa9.79□□□□□ -0.84
MKS1-207ENST00000578789 UBE2D2P62837 147 aa9.79□□□□□ -0.84
MKS1-207ENST00000578789 RPL36AP83881 106 aaKnown RBP9.79□□□□□ -0.84
MKS1-207ENST00000578789 LYZL1Q6UWQ5 148 aa9.79□□□□□ -0.84
MKS1-207ENST00000578789 LINC01551Q86U37 167 aa9.79□□□□□ -0.84
MKS1-207ENST00000578789 RPL36ALQ969Q0 106 aaKnown RBP9.79□□□□□ -0.84
MKS1-207ENST00000578789 MSRB1Q9NZV6 116 aa9.79□□□□□ -0.84
MKS1-207ENST00000578789 DYNC1H1Q14204 4646 aaKnown RBP9.78□□□□□ -0.84
MKS1-207ENST00000578789 TRBV7-3A0A075B6L6 115 aa9.78□□□□□ -0.84
MKS1-207ENST00000578789 A0A087WWC5 75 aa9.78□□□□□ -0.84
MKS1-207ENST00000578789 ZNF727A8MUV8 499 aa9.78□□□□□ -0.84
MKS1-207ENST00000578789 SMIM17P0DL12 118 aa9.78□□□□□ -0.84
MKS1-207ENST00000578789 SSTP61278 116 aa9.78□□□□□ -0.84
MKS1-207ENST00000578789 CT83Q5H943 113 aa9.78□□□□□ -0.84
MKS1-207ENST00000578789 NEXN-AS1Q8NBZ9 246 aa9.78□□□□□ -0.84
MKS1-207ENST00000578789 GATCO43716 136 aaKnown RBP9.77□□□□□ -0.85
MKS1-207ENST00000578789 TRGC1P0CF51 173 aa9.77□□□□□ -0.85
MKS1-207ENST00000578789 NFE4Q86UQ8 179 aa9.77□□□□□ -0.85
MKS1-207ENST00000578789 GTSF1Q8WW33 167 aa9.77□□□□□ -0.85
MKS1-207ENST00000578789 SMDT1Q9H4I9 107 aa9.77□□□□□ -0.85
MKS1-207ENST00000578789 A8MWL6 223 aa9.76□□□□□ -0.85
MKS1-207ENST00000578789 C9JQL5 133 aa9.76□□□□□ -0.85
MKS1-207ENST00000578789 F5H697 171 aa9.76□□□□□ -0.85
MKS1-207ENST00000578789 NTF3P20783 257 aa9.76□□□□□ -0.85
MKS1-207ENST00000578789 ERVFC1-1P60608 527 aa9.76□□□□□ -0.85
MKS1-207ENST00000578789 PEA15Q15121 130 aa9.76□□□□□ -0.85
MKS1-207ENST00000578789 FAM74A3Q4VXF1 159 aa9.76□□□□□ -0.85
MKS1-207ENST00000578789 SRSF3P84103 164 aaKnown RBP9.75□□□□□ -0.85
MKS1-207ENST00000578789 DPH3P1Q9H4G8 78 aa9.75□□□□□ -0.85
MKS1-207ENST00000578789 OSTCQ9NRP0 149 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms