RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 LYZL1Q6UWQ5 148 aa2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 DPPA3Q6W0C5 159 aa2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 GTF2H5Q6ZYL4 71 aa2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 FAM216BQ8N7L0 139 aa2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 WFDC11Q8NEX6 87 aa2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 SFT2D1Q8WV19 159 aa2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 COPS9Q8WXC6 57 aa2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 DPH3Q96FX2 82 aa2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 SLC35B3Q9H1N7 401 aa2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 ZFC3H1O60293 1989 aaKnown RBP2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 USP9YO00507 2555 aaPredicted RBP2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 VPS13CQ709C8 3753 aa2.68□□□□□ -1.98
GAPLINC-201ENST00000578664 CACNA1DQ01668 2161 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 APCP25054 2843 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 A0A087WXM4 84 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 TRGV5A0A0B4J1U4 118 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 TRBV10-2A0A0K0K1G8 114 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 A0A1W2PNU3 283 aaPredicted RBP2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 FXYD1O00168 92 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 TIMM17BO60830 172 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 CLPSP04118 112 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 IFI6P09912 130 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 CCL4P13236 92 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 TPT1P13693 172 aaKnown RBP2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 ZNF19P17023 458 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 SPINT3P49223 89 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 POLR2JP52435 117 aaKnown RBP2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 HSD52Q0P140 79 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 FOXF1Q12946 379 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 ZNF79Q15937 498 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 ASB16-AS1Q495Z4 193 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 C2orf83Q53S99 150 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 LINC01545Q5VT33 79 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 SNX29P2Q8IUI4 249 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 CCL4L1Q8NHW4 92 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 CIB3Q96Q77 187 aaPredicted RBP2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 FAIMQ9NVQ4 179 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 METTL1Q9UBP6 276 aaKnown RBP2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 TIMM9Q9Y5J7 89 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 S4R3C0 116 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 AHCTF1Q8WYP5 2266 aa2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 NIPBLQ6KC79 2804 aaeCLIP2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 TLN1Q9Y490 2541 aaKnown RBP2.67□□□□□ -1.98
GAPLINC-201ENST00000578664 TRPM6Q9BX84 2022 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 NF1P21359 2839 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 TRAV12-2A0A075B6T6 113 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 IGHV3OR16-8A0A075B7F1 116 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 PNMA8CA0A1B0GUJ8 204 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 A0A1B0GVG6 124 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 CCDC179H3BU77 68 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 SYNGR2O43760 224 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 CPSF4O95639 269 aaKnown RBP2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 FABP4P15090 132 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 ZNF90Q03938 601 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 NCMAPQ5T1S8 102 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 AQP3Q92482 292 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 BCL2L10Q9HD36 194 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 TAS2R8Q9NYW2 309 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 DNHD1Q96M86 4753 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 UNC13CQ8NB66 2214 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 MAP1AP78559 2803 aaPredicted RBP2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 MYO9AB2RTY4 2548 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 LRRK2Q5S007 2527 aa2.66□□□□□ -1.98
GAPLINC-201ENST00000578664 ZNF469Q96JG9 3925 aaPredicted RBP2.65□□□□□ -1.98
GAPLINC-201ENST00000578664 ANKRD17O75179 2603 aaKnown RBP2.65□□□□□ -1.98
GAPLINC-201ENST00000578664 ICE1Q9Y2F5 2266 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 LOC107986453A0A1B0GWG9 222 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 H7C2G1 150 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 GNRH2O43555 120 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 RBP4P02753 201 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 LINC00032P0C843 101 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 S100A3P33764 101 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 CDK5R1Q15078 307 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 LGALSLQ3ZCW2 172 aaPredicted RBP2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 COL5A1-AS1Q5SY13 56 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 GKN2Q86XP6 184 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 LINC00471Q8N535 108 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 KCNRGQ8N5I3 272 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 LINC00612Q8N6U2 182 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 DPY30Q9C005 99 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 NAA60Q9H7X0 242 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 U3KQA8 63 aa2.65□□□□□ -1.99
GAPLINC-201ENST00000578664 SDK2Q58EX2 2172 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 MED13Q9UHV7 2174 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 NBASA2RRP1 2371 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 OR51F1A6NGY5 319 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 LYRM1O43325 122 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 OR1I1O60431 355 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 CD3DP04234 171 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 ZNF705BP0CI00 300 aaPredicted RBP2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 ZNF22P17026 224 aaPredicted RBP2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 SMIM11AP58511 58 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 IGFBP7Q16270 282 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 FAM27BQ5VT28 67 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 Q8N2B8 174 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 RETNLBQ9BQ08 111 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 SNHG12Q9BXW3 62 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 TAS2R4Q9NYW5 299 aa2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 LSM2Q9Y333 95 aaKnown RBP2.64□□□□□ -1.99
GAPLINC-201ENST00000578664 TPRKBQ9Y3C4 175 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms