RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 TRBV6-4A0A1B0GX49 114 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 APOC3P02656 99 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 S100A8P05109 93 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 CRYGDP07320 174 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 SMIM17P0DL12 118 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 GATA1P15976 413 aaPredicted RBP9.76□□□□□ -0.85
LINC01543-201ENST00000578367 FHL2Q14192 279 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 ATP5L2Q7Z4Y8 100 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 SLC7A5P1Q8MH63 180 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 NUP35Q8NFH5 326 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 FRZBQ92765 325 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 PGLYRP4Q96LB8 373 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 HHLA3Q9XRX5 114 aa9.76□□□□□ -0.85
LINC01543-201ENST00000578367 C7orf77A4D0Y5 90 aa9.75□□□□□ -0.85
LINC01543-201ENST00000578367 HTN3P15516 51 aa9.75□□□□□ -0.85
LINC01543-201ENST00000578367 HOXA5P20719 270 aa9.75□□□□□ -0.85
LINC01543-201ENST00000578367 TWIST1Q15672 202 aa9.75□□□□□ -0.85
LINC01543-201ENST00000578367 KCNIP4Q6PIL6 250 aa9.75□□□□□ -0.85
LINC01543-201ENST00000578367 CRYBA4P53673 196 aa9.74□□□□□ -0.85
LINC01543-201ENST00000578367 RAB4BP61018 213 aa9.74□□□□□ -0.85
LINC01543-201ENST00000578367 CASC10Q5T4H9 136 aa9.74□□□□□ -0.85
LINC01543-201ENST00000578367 BTF3L4Q96K17 158 aa9.74□□□□□ -0.85
LINC01543-201ENST00000578367 DPH3P1Q9H4G8 78 aa9.74□□□□□ -0.85
LINC01543-201ENST00000578367 KIF25-AS1Q9Y6Z4 181 aa9.74□□□□□ -0.85
LINC01543-201ENST00000578367 TRBV10-1A0A0K0K1A3 114 aa9.73□□□□□ -0.85
LINC01543-201ENST00000578367 PAX4O43316 350 aa9.73□□□□□ -0.85
LINC01543-201ENST00000578367 IGHV3-53P01767 116 aa9.73□□□□□ -0.85
LINC01543-201ENST00000578367 S100PP25815 95 aa9.73□□□□□ -0.85
LINC01543-201ENST00000578367 RHOHQ15669 191 aa9.73□□□□□ -0.85
LINC01543-201ENST00000578367 SH2D6Q7Z4S9 175 aa9.73□□□□□ -0.85
LINC01543-201ENST00000578367 PRADC1Q9BSG0 188 aa9.73□□□□□ -0.85
LINC01543-201ENST00000578367 TMEM191AQ9H0A3 160 aa9.73□□□□□ -0.85
LINC01543-201ENST00000578367 TRAV26-1A0A087WT03 109 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 MUC21A0A0G2JKD1 596 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 MUC21A0A140T8X8 626 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 IGLL5B9A064 214 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 H7C1H1 209 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 TMEM88Q6PEY1 159 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 RASL11AQ6T310 242 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 C14orf178Q8N769 122 aaPredicted RBP9.72□□□□□ -0.85
LINC01543-201ENST00000578367 SAMD10Q9BYL1 202 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 JPT2Q9H910 190 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 RPS10P5Q9NQ39 176 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 MSRB1Q9NZV6 116 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 MUC4Q99102 2169 aa9.72□□□□□ -0.85
LINC01543-201ENST00000578367 A0A087WWL8 130 aa9.71□□□□□ -0.86
LINC01543-201ENST00000578367 LINC00315P59091 139 aa9.71□□□□□ -0.86
LINC01543-201ENST00000578367 HBBP68871 147 aa9.71□□□□□ -0.86
LINC01543-201ENST00000578367 MRPL23Q16540 153 aaKnown RBP9.71□□□□□ -0.86
LINC01543-201ENST00000578367 FAM74A4Q5TZK3 123 aa9.71□□□□□ -0.86
LINC01543-201ENST00000578367 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.86
LINC01543-201ENST00000578367 SLC25A29Q8N8R3 303 aa9.71□□□□□ -0.86
LINC01543-201ENST00000578367 GATD1Q8NB37 220 aa9.71□□□□□ -0.86
LINC01543-201ENST00000578367 A0A1B0GXF2 115 aa9.7□□□□□ -0.86
LINC01543-201ENST00000578367 K7EQD1 137 aa9.7□□□□□ -0.86
LINC01543-201ENST00000578367 EVI2AP22794 236 aa9.7□□□□□ -0.86
LINC01543-201ENST00000578367 VSIG2Q96IQ7 327 aa9.7□□□□□ -0.86
LINC01543-201ENST00000578367 ICOSQ9Y6W8 199 aa9.7□□□□□ -0.86
LINC01543-201ENST00000578367 FAM3BP58499 235 aaPredicted RBP9.69□□□□□ -0.86
LINC01543-201ENST00000578367 SSTP61278 116 aa9.69□□□□□ -0.86
LINC01543-201ENST00000578367 ZNF56Q15929 161 aa9.69□□□□□ -0.86
LINC01543-201ENST00000578367 COX19Q49B96 90 aa9.69□□□□□ -0.86
LINC01543-201ENST00000578367 APLNQ9ULZ1 77 aa9.69□□□□□ -0.86
LINC01543-201ENST00000578367 DYNC2H1Q8NCM8 4307 aaKnown RBP9.69□□□□□ -0.86
LINC01543-201ENST00000578367 IGHV3-73A0A0B4J1V6 119 aa9.68□□□□□ -0.86
LINC01543-201ENST00000578367 F5H697 171 aa9.68□□□□□ -0.86
LINC01543-201ENST00000578367 DNAJC30Q96LL9 226 aa9.68□□□□□ -0.86
LINC01543-201ENST00000578367 A0A0J9YY99 117 aa9.67□□□□□ -0.86
LINC01543-201ENST00000578367 PPP1R17O96001 155 aa9.67□□□□□ -0.86
LINC01543-201ENST00000578367 GYPEP15421 78 aa9.67□□□□□ -0.86
LINC01543-201ENST00000578367 TIRAPP58753 221 aa9.67□□□□□ -0.86
LINC01543-201ENST00000578367 MRAP2Q96G30 205 aa9.67□□□□□ -0.86
LINC01543-201ENST00000578367 M0QY20 66 aa9.66□□□□□ -0.86
LINC01543-201ENST00000578367 SRIP30626 198 aa9.66□□□□□ -0.86
LINC01543-201ENST00000578367 RPL36AP83881 106 aaKnown RBP9.66□□□□□ -0.86
LINC01543-201ENST00000578367 FAM104BQ5XKR9 115 aa9.66□□□□□ -0.86
LINC01543-201ENST00000578367 MRPL54Q6P161 138 aaKnown RBP9.66□□□□□ -0.86
LINC01543-201ENST00000578367 Q6ZSN1 163 aa9.66□□□□□ -0.86
LINC01543-201ENST00000578367 NEGR1Q7Z3B1 354 aa9.66□□□□□ -0.86
LINC01543-201ENST00000578367 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.66□□□□□ -0.86
LINC01543-201ENST00000578367 RPL36ALQ969Q0 106 aaKnown RBP9.66□□□□□ -0.86
LINC01543-201ENST00000578367 TRBV7-3A0A075B6L6 115 aa9.65□□□□□ -0.86
LINC01543-201ENST00000578367 A0A096LPF7 62 aa9.65□□□□□ -0.86
LINC01543-201ENST00000578367 NUDT3O95989 172 aa9.65□□□□□ -0.86
LINC01543-201ENST00000578367 PPBPP02775 128 aa9.65□□□□□ -0.86
LINC01543-201ENST00000578367 MGPP08493 103 aa9.65□□□□□ -0.86
LINC01543-201ENST00000578367 P0DMU3 169 aa9.65□□□□□ -0.86
LINC01543-201ENST00000578367 FAM231AP0DMU4 169 aa9.65□□□□□ -0.86
LINC01543-201ENST00000578367 FAM231CP0DMU5 169 aa9.65□□□□□ -0.86
LINC01543-201ENST00000578367 CAMPP49913 170 aa9.65□□□□□ -0.86
LINC01543-201ENST00000578367 SUMO4Q6EEV6 95 aa9.65□□□□□ -0.86
LINC01543-201ENST00000578367 SMCO4Q9NRQ5 59 aa9.65□□□□□ -0.86
LINC01543-201ENST00000578367 TRBV24-1A0A075B6N3 115 aa9.64□□□□□ -0.87
LINC01543-201ENST00000578367 LINC00694P0DN24 101 aa9.64□□□□□ -0.87
LINC01543-201ENST00000578367 RAB4AP20338 218 aa9.64□□□□□ -0.87
LINC01543-201ENST00000578367 S100A1P23297 94 aa9.64□□□□□ -0.87
LINC01543-201ENST00000578367 CCL18P55774 89 aa9.64□□□□□ -0.87
LINC01543-201ENST00000578367 NIT2Q9NQR4 276 aa9.64□□□□□ -0.87
LINC01543-201ENST00000578367 CSMD3Q7Z407 3707 aa9.64□□□□□ -0.87
LINC01543-201ENST00000578367 STARD9Q9P2P6 4700 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms