RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 ERVFC1-1P60608 527 aa10.69□□□□□ -0.7
IFT20-206ENST00000578122 SSTP61278 116 aa10.69□□□□□ -0.7
IFT20-206ENST00000578122 NAT8Q9UHE5 227 aa10.69□□□□□ -0.7
IFT20-206ENST00000578122 A0A087WWL8 130 aa10.68□□□□□ -0.7
IFT20-206ENST00000578122 A0A1W2PPQ1 181 aa10.68□□□□□ -0.7
IFT20-206ENST00000578122 F2Z2F3 143 aa10.68□□□□□ -0.7
IFT20-206ENST00000578122 GHRHP01286 108 aa10.68□□□□□ -0.7
IFT20-206ENST00000578122 CCL18P55774 89 aa10.68□□□□□ -0.7
IFT20-206ENST00000578122 RPL23P62829 140 aaKnown RBP10.68□□□□□ -0.7
IFT20-206ENST00000578122 MRPL23Q16540 153 aaKnown RBP10.68□□□□□ -0.7
IFT20-206ENST00000578122 UFSP1Q6NVU6 142 aa10.68□□□□□ -0.7
IFT20-206ENST00000578122 OSTCQ9NRP0 149 aa10.68□□□□□ -0.7
IFT20-206ENST00000578122 TRBV6-4A0A1B0GX49 114 aa10.67□□□□□ -0.7
IFT20-206ENST00000578122 CRYGDP07320 174 aa10.67□□□□□ -0.7
IFT20-206ENST00000578122 CACNG7P62955 275 aa10.67□□□□□ -0.7
IFT20-206ENST00000578122 ADIRFQ15847 76 aa10.67□□□□□ -0.7
IFT20-206ENST00000578122 FAM74A4Q5TZK3 123 aa10.67□□□□□ -0.7
IFT20-206ENST00000578122 LYZL1Q6UWQ5 148 aa10.67□□□□□ -0.7
IFT20-206ENST00000578122 Q6ZSN1 163 aa10.67□□□□□ -0.7
IFT20-206ENST00000578122 SLC25A29Q8N8R3 303 aa10.67□□□□□ -0.7
IFT20-206ENST00000578122 PRADC1Q9BSG0 188 aa10.67□□□□□ -0.7
IFT20-206ENST00000578122 LOC100131303A0A0U1RQF7 123 aa10.66□□□□□ -0.7
IFT20-206ENST00000578122 A8MWL6 223 aa10.66□□□□□ -0.7
IFT20-206ENST00000578122 K7EQD1 137 aa10.66□□□□□ -0.7
IFT20-206ENST00000578122 SRIP30626 198 aa10.66□□□□□ -0.7
IFT20-206ENST00000578122 FAM3BP58499 235 aaPredicted RBP10.66□□□□□ -0.7
IFT20-206ENST00000578122 RHOHQ15669 191 aa10.66□□□□□ -0.7
IFT20-206ENST00000578122 ESRGQ1W209 222 aa10.66□□□□□ -0.7
IFT20-206ENST00000578122 CT83Q5H943 113 aa10.66□□□□□ -0.7
IFT20-206ENST00000578122 ISOC2Q96AB3 205 aa10.66□□□□□ -0.7
IFT20-206ENST00000578122 LINC00588Q9Y4M8 146 aa10.66□□□□□ -0.7
IFT20-206ENST00000578122 ALMS1Q8TCU4 4167 aa10.66□□□□□ -0.7
IFT20-206ENST00000578122 PLECQ15149 4684 aaKnown RBP10.66□□□□□ -0.7
IFT20-206ENST00000578122 CTRLP40313 264 aa10.65□□□□□ -0.7
IFT20-206ENST00000578122 WDR73Q6P4I2 378 aa10.65□□□□□ -0.7
IFT20-206ENST00000578122 NEGR1Q7Z3B1 354 aa10.65□□□□□ -0.7
IFT20-206ENST00000578122 C15orf54Q8N8G6 183 aa10.65□□□□□ -0.7
IFT20-206ENST00000578122 KMT2CQ8NEZ4 4911 aaKnown RBP10.65□□□□□ -0.71
IFT20-206ENST00000578122 C14orf178Q8N769 122 aaPredicted RBP10.64□□□□□ -0.71
IFT20-206ENST00000578122 GTSF1Q8WW33 167 aa10.64□□□□□ -0.71
IFT20-206ENST00000578122 AP1S3Q96PC3 154 aa10.64□□□□□ -0.71
IFT20-206ENST00000578122 MRPL18Q9H0U6 180 aaKnown RBP10.64□□□□□ -0.71
IFT20-206ENST00000578122 MSRB1Q9NZV6 116 aa10.64□□□□□ -0.71
IFT20-206ENST00000578122 SMIM17P0DL12 118 aa10.63□□□□□ -0.71
IFT20-206ENST00000578122 SH2D6Q7Z4S9 175 aa10.63□□□□□ -0.71
IFT20-206ENST00000578122 OR10G8Q8NGN5 311 aa10.63□□□□□ -0.71
IFT20-206ENST00000578122 KRTAP9-2Q9BYQ4 174 aa10.63□□□□□ -0.71
IFT20-206ENST00000578122 V9GYV3 84 aa10.63□□□□□ -0.71
IFT20-206ENST00000578122 NTF3P20783 257 aa10.62□□□□□ -0.71
IFT20-206ENST00000578122 RAB4BP61018 213 aa10.62□□□□□ -0.71
IFT20-206ENST00000578122 ZNF56Q15929 161 aa10.62□□□□□ -0.71
IFT20-206ENST00000578122 UQCC3Q6UW78 93 aa10.62□□□□□ -0.71
IFT20-206ENST00000578122 LYPD5Q6UWN5 251 aa10.62□□□□□ -0.71
IFT20-206ENST00000578122 TSKUQ8WUA8 353 aa10.62□□□□□ -0.71
IFT20-206ENST00000578122 PGLYRP4Q96LB8 373 aa10.62□□□□□ -0.71
IFT20-206ENST00000578122 CNFNQ9BYD5 112 aa10.62□□□□□ -0.71
IFT20-206ENST00000578122 MRPS16Q9Y3D3 137 aaKnown RBP10.62□□□□□ -0.71
IFT20-206ENST00000578122 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.61□□□□□ -0.71
IFT20-206ENST00000578122 TRGC1P0CF51 173 aa10.61□□□□□ -0.71
IFT20-206ENST00000578122 FOXA3P55318 350 aaPredicted RBP10.61□□□□□ -0.71
IFT20-206ENST00000578122 TWIST1Q15672 202 aa10.61□□□□□ -0.71
IFT20-206ENST00000578122 COMMD7Q86VX2 200 aa10.61□□□□□ -0.71
IFT20-206ENST00000578122 ZNRF2Q8NHG8 242 aa10.61□□□□□ -0.71
IFT20-206ENST00000578122 GFRA4Q9GZZ7 299 aa10.61□□□□□ -0.71
IFT20-206ENST00000578122 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
IFT20-206ENST00000578122 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
IFT20-206ENST00000578122 GAGE12JA6NER3 117 aa10.6□□□□□ -0.71
IFT20-206ENST00000578122 F5H697 171 aa10.6□□□□□ -0.71
IFT20-206ENST00000578122 GAGE1Q13065 139 aa10.6□□□□□ -0.71
IFT20-206ENST00000578122 GAGE4Q13068 117 aa10.6□□□□□ -0.71
IFT20-206ENST00000578122 GAGE5Q13069 117 aa10.6□□□□□ -0.71
IFT20-206ENST00000578122 GAGE13Q4V321 117 aa10.6□□□□□ -0.71
IFT20-206ENST00000578122 Q9UF83 564 aa10.6□□□□□ -0.71
IFT20-206ENST00000578122 LINC00862A6NCI5 91 aa10.59□□□□□ -0.71
IFT20-206ENST00000578122 FAM231BA6NCW3 169 aa10.59□□□□□ -0.71
IFT20-206ENST00000578122 HIGD1CA8MV81 97 aa10.59□□□□□ -0.71
IFT20-206ENST00000578122 MGPP08493 103 aa10.59□□□□□ -0.71
IFT20-206ENST00000578122 EVI2AP22794 236 aa10.59□□□□□ -0.71
IFT20-206ENST00000578122 LINC00315P59091 139 aa10.59□□□□□ -0.71
IFT20-206ENST00000578122 BORCS7Q96B45 105 aa10.59□□□□□ -0.71
IFT20-206ENST00000578122 UPK3BQ9BT76 320 aa10.59□□□□□ -0.71
IFT20-206ENST00000578122 LYSTQ99698 3801 aa10.59□□□□□ -0.71
IFT20-206ENST00000578122 TRBV10-1A0A0K0K1A3 114 aa10.58□□□□□ -0.72
IFT20-206ENST00000578122 LINC00694P0DN24 101 aa10.58□□□□□ -0.72
IFT20-206ENST00000578122 TIRAPP58753 221 aa10.58□□□□□ -0.72
IFT20-206ENST00000578122 ATP6V0E2Q8NHE4 81 aa10.58□□□□□ -0.72
IFT20-206ENST00000578122 DPH3P1Q9H4G8 78 aa10.58□□□□□ -0.72
IFT20-206ENST00000578122 Q9H8V8 135 aa10.58□□□□□ -0.72
IFT20-206ENST00000578122 RYR3Q15413 4870 aa10.58□□□□□ -0.72
IFT20-206ENST00000578122 DNAH1Q9P2D7 4330 aa10.58□□□□□ -0.72
IFT20-206ENST00000578122 A0A1B0GUT8 65 aa10.57□□□□□ -0.72
IFT20-206ENST00000578122 TMEM218A2RU14 115 aa10.57□□□□□ -0.72
IFT20-206ENST00000578122 M0R2N4 97 aa10.57□□□□□ -0.72
IFT20-206ENST00000578122 PNRC1Q12796 327 aaPredicted RBP10.57□□□□□ -0.72
IFT20-206ENST00000578122 KRTAP9-6A0A140TA67 174 aa10.56□□□□□ -0.72
IFT20-206ENST00000578122 RPL36AP83881 106 aaKnown RBP10.56□□□□□ -0.72
IFT20-206ENST00000578122 SMIM15Q7Z3B0 74 aa10.56□□□□□ -0.72
IFT20-206ENST00000578122 RPL36ALQ969Q0 106 aaKnown RBP10.56□□□□□ -0.72
IFT20-206ENST00000578122 NAT8BQ9UHF3 227 aa10.56□□□□□ -0.72
IFT20-206ENST00000578122 SACSQ9NZJ4 4579 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms