RNA–Protein interactions for RNA: ENST00000577561.1

NUP85-205, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-205ENST00000577561 OR5AL1P0C617 328 aa13.26□□□□□ -0.29
NUP85-205ENST00000577561 DNAH10OSP0CZ25 163 aa13.26□□□□□ -0.29
NUP85-205ENST00000577561 FAM74A4Q5TZK3 123 aa13.26□□□□□ -0.29
NUP85-205ENST00000577561 ATP6V0E2Q8NHE4 81 aa13.26□□□□□ -0.29
NUP85-205ENST00000577561 DAZAP1Q96EP5 407 aaKnown RBP13.26□□□□□ -0.29
NUP85-205ENST00000577561 TRAV9-2A0A087WT02 112 aa13.25□□□□□ -0.29
NUP85-205ENST00000577561 C19orf71A6NCJ1 209 aa13.25□□□□□ -0.29
NUP85-205ENST00000577561 K7EP13 123 aa13.25□□□□□ -0.29
NUP85-205ENST00000577561 LINC00315P59091 139 aa13.25□□□□□ -0.29
NUP85-205ENST00000577561 C14orf178Q8N769 122 aaPredicted RBP13.25□□□□□ -0.29
NUP85-205ENST00000577561 OR10AG1Q8NH19 301 aa13.25□□□□□ -0.29
NUP85-205ENST00000577561 GTSF1LQ9H1H1 148 aa13.25□□□□□ -0.29
NUP85-205ENST00000577561 DYNC1H1Q14204 4646 aaKnown RBP13.24□□□□□ -0.29
NUP85-205ENST00000577561 GAGE12JA6NER3 117 aa13.24□□□□□ -0.29
NUP85-205ENST00000577561 RBFOX3A6NFN3 312 aa13.24□□□□□ -0.29
NUP85-205ENST00000577561 LINC00694P0DN24 101 aa13.24□□□□□ -0.29
NUP85-205ENST00000577561 GAGE1Q13065 139 aa13.24□□□□□ -0.29
NUP85-205ENST00000577561 GAGE4Q13068 117 aa13.24□□□□□ -0.29
NUP85-205ENST00000577561 GAGE5Q13069 117 aa13.24□□□□□ -0.29
NUP85-205ENST00000577561 GAGE13Q4V321 117 aa13.24□□□□□ -0.29
NUP85-205ENST00000577561 BIN3Q9NQY0 253 aa13.24□□□□□ -0.29
NUP85-205ENST00000577561 Q9UF83 564 aa13.24□□□□□ -0.29
NUP85-205ENST00000577561 EVI2AP22794 236 aa13.23□□□□□ -0.29
NUP85-205ENST00000577561 LELP1Q5T871 98 aa13.23□□□□□ -0.29
NUP85-205ENST00000577561 TRAV8-6A0A0B4J262 113 aa13.22□□□□□ -0.29
NUP85-205ENST00000577561 RPS20P60866 119 aaKnown RBP13.22□□□□□ -0.29
NUP85-205ENST00000577561 SPANXN1Q5VSR9 72 aa13.22□□□□□ -0.29
NUP85-205ENST00000577561 OR2D3Q8NGH3 330 aa13.22□□□□□ -0.29
NUP85-205ENST00000577561 IGHV3-38A0A0C4DH36 116 aa13.21□□□□□ -0.29
NUP85-205ENST00000577561 MUC21A0A0G2JKD1 596 aa13.21□□□□□ -0.29
NUP85-205ENST00000577561 MUC21A0A140T8X8 626 aa13.21□□□□□ -0.29
NUP85-205ENST00000577561 TMEM250H0YL14 139 aa13.21□□□□□ -0.29
NUP85-205ENST00000577561 P01737 135 aa13.21□□□□□ -0.29
NUP85-205ENST00000577561 OR10J3Q5JRS4 329 aa13.21□□□□□ -0.29
NUP85-205ENST00000577561 Q6ZRN7 208 aaPredicted RBP13.21□□□□□ -0.29
NUP85-205ENST00000577561 IGLC6P0CF74 106 aa13.2□□□□□ -0.3
NUP85-205ENST00000577561 GZMBP10144 247 aa13.2□□□□□ -0.3
NUP85-205ENST00000577561 LINC01556Q5JQF7 62 aa13.2□□□□□ -0.3
NUP85-205ENST00000577561 TRBV10-1A0A0K0K1A3 114 aa13.19□□□□□ -0.3
NUP85-205ENST00000577561 XKRY2A2RUG3 117 aa13.19□□□□□ -0.3
NUP85-205ENST00000577561 RAB4BP61018 213 aa13.19□□□□□ -0.3
NUP85-205ENST00000577561 NFE4Q86UQ8 179 aa13.19□□□□□ -0.3
NUP85-205ENST00000577561 C10orf126Q8N4M7 172 aa13.19□□□□□ -0.3
NUP85-205ENST00000577561 FER1L6-AS1Q8NA97 138 aa13.19□□□□□ -0.3
NUP85-205ENST00000577561 TNFRSF18Q9Y5U5 241 aa13.19□□□□□ -0.3
NUP85-205ENST00000577561 SSTP61278 116 aa13.18□□□□□ -0.3
NUP85-205ENST00000577561 NUDT10Q8NFP7 164 aa13.18□□□□□ -0.3
NUP85-205ENST00000577561 OCC1Q8TAD7 63 aa13.18□□□□□ -0.3
NUP85-205ENST00000577561 NUDT11Q96G61 164 aa13.18□□□□□ -0.3
NUP85-205ENST00000577561 MSRB1Q9NZV6 116 aa13.18□□□□□ -0.3
NUP85-205ENST00000577561 KIAA1109Q2LD37 5005 aa13.18□□□□□ -0.3
NUP85-205ENST00000577561 K7EN84 100 aa13.17□□□□□ -0.3
NUP85-205ENST00000577561 TOR2AQ5JU69 321 aa13.17□□□□□ -0.3
NUP85-205ENST00000577561 TPPP3Q9BW30 176 aa13.17□□□□□ -0.3
NUP85-205ENST00000577561 A0A087WWC5 75 aa13.16□□□□□ -0.3
NUP85-205ENST00000577561 F2Z2F3 143 aa13.16□□□□□ -0.3
NUP85-205ENST00000577561 NDUFS6O75380 124 aaKnown RBP13.16□□□□□ -0.3
NUP85-205ENST00000577561 RPL36AP83881 106 aaKnown RBP13.16□□□□□ -0.3
NUP85-205ENST00000577561 ZNF56Q15929 161 aa13.16□□□□□ -0.3
NUP85-205ENST00000577561 RPL36ALQ969Q0 106 aaKnown RBP13.16□□□□□ -0.3
NUP85-205ENST00000577561 FAM210AQ96ND0 272 aa13.16□□□□□ -0.3
NUP85-205ENST00000577561 AP1S3Q96PC3 154 aa13.16□□□□□ -0.3
NUP85-205ENST00000577561 EIF5A2Q9GZV4 153 aaKnown RBP13.16□□□□□ -0.3
NUP85-205ENST00000577561 KIF25-AS1Q9Y6Z4 181 aa13.16□□□□□ -0.3
NUP85-205ENST00000577561 CACNG7P62955 275 aa13.15□□□□□ -0.3
NUP85-205ENST00000577561 OR10G8Q8NGN5 311 aa13.15□□□□□ -0.3
NUP85-205ENST00000577561 HERC2O95714 4834 aa13.15□□□□□ -0.3
NUP85-205ENST00000577561 TRBV7-3A0A075B6L6 115 aa13.14□□□□□ -0.31
NUP85-205ENST00000577561 SMIM17P0DL12 118 aa13.14□□□□□ -0.31
NUP85-205ENST00000577561 RNASE7Q9H1E1 156 aaKnown RBP13.14□□□□□ -0.31
NUP85-205ENST00000577561 IBA57-AS1B1ANH7 110 aa13.13□□□□□ -0.31
NUP85-205ENST00000577561 F5H697 171 aa13.13□□□□□ -0.31
NUP85-205ENST00000577561 IGHV3-30P01768 117 aa13.13□□□□□ -0.31
NUP85-205ENST00000577561 IGHV3-33P01772 117 aa13.13□□□□□ -0.31
NUP85-205ENST00000577561 IGHV3-30-3P0DP02 117 aa13.13□□□□□ -0.31
NUP85-205ENST00000577561 IGHV3-30-5P0DP03 117 aa13.13□□□□□ -0.31
NUP85-205ENST00000577561 CEBPGP53567 150 aa13.13□□□□□ -0.31
NUP85-205ENST00000577561 UBE2D3P61077 147 aa13.13□□□□□ -0.31
NUP85-205ENST00000577561 UBE2D2P62837 147 aa13.13□□□□□ -0.31
NUP85-205ENST00000577561 LYZL1Q6UWQ5 148 aa13.13□□□□□ -0.31
NUP85-205ENST00000577561 RPP21Q9H633 154 aaKnown RBP13.13□□□□□ -0.31
NUP85-205ENST00000577561 TEX261Q6UWH6 196 aa13.12□□□□□ -0.31
NUP85-205ENST00000577561 SPATA12Q7Z6I5 190 aa13.12□□□□□ -0.31
NUP85-205ENST00000577561 NEXN-AS1Q8NBZ9 246 aa13.12□□□□□ -0.31
NUP85-205ENST00000577561 C16orf90A8MZG2 172 aa13.11□□□□□ -0.31
NUP85-205ENST00000577561 WDR73Q6P4I2 378 aa13.11□□□□□ -0.31
NUP85-205ENST00000577561 LRP1BQ9NZR2 4599 aa13.1□□□□□ -0.31
NUP85-205ENST00000577561 SRP19P09132 144 aaKnown RBP13.1□□□□□ -0.31
NUP85-205ENST00000577561 CTRLP40313 264 aa13.1□□□□□ -0.31
NUP85-205ENST00000577561 FAM231DQ6ZW35 169 aa13.1□□□□□ -0.31
NUP85-205ENST00000577561 SMIM7Q9BQ49 75 aa13.1□□□□□ -0.31
NUP85-205ENST00000577561 NTF3P20783 257 aa13.09□□□□□ -0.31
NUP85-205ENST00000577561 KRTAP10-2P60368 255 aa13.09□□□□□ -0.31
NUP85-205ENST00000577561 ERVFC1-1P60608 527 aa13.09□□□□□ -0.31
NUP85-205ENST00000577561 Q8N3U1 123 aa13.09□□□□□ -0.31
NUP85-205ENST00000577561 CNFNQ9BYD5 112 aa13.09□□□□□ -0.31
NUP85-205ENST00000577561 EREGO14944 169 aa13.08□□□□□ -0.32
NUP85-205ENST00000577561 GATCO43716 136 aaKnown RBP13.08□□□□□ -0.32
NUP85-205ENST00000577561 TRGC1P0CF51 173 aa13.08□□□□□ -0.32
NUP85-205ENST00000577561 LAGE3Q14657 143 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms